prot_P-littoralis_Contig1338.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1338.2.1
Unique Nameprot_P-littoralis_Contig1338.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length71
Homology
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BLAST of mRNA_P-littoralis_Contig1338.2.1 vs. uniprot
Match: A0A6H5KXH5_9PHAE (CMD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXH5_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 7.590e-31
Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0 
Query:    1 MLFGILNRVVDTFVSKTESGPMFPLPVRMMMKVQPMTSLVQRLTSWMMSWMMNGEDGKVEAGKVFKDINE 70
            MLF ILNRVVDTFVSKTE+GPMFPLP+RMMMKVQP T L+QR  SWMMSWMM+GED KVEAGKV K+INE
Sbjct:  198 MLFDILNRVVDTFVSKTEAGPMFPLPMRMMMKVQPATPLLQRAMSWMMSWMMHGEDVKVEAGKVLKEINE 267
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1338.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KXH5_9PHAE7.590e-3182.86CMD domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1338contigP-littoralis_Contig1338:3179..5304 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1338.2.1mRNA_P-littoralis_Contig1338.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1338 3171..6607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1338.2.1 ID=prot_P-littoralis_Contig1338.2.1|Name=mRNA_P-littoralis_Contig1338.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=71bp
MLFGILNRVVDTFVSKTESGPMFPLPVRMMMKVQPMTSLVQRLTSWMMSW
MMNGEDGKVEAGKVFKDINE*
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