prot_P-littoralis_Contig1316.13.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1316.13.1
Unique Nameprot_P-littoralis_Contig1316.13.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length94
Homology
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BLAST of mRNA_P-littoralis_Contig1316.13.1 vs. uniprot
Match: A0A6A3QK27_9STRA (DDE Tnp4 domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3QK27_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 5.210e-7
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0 
Query:    5 AFMDLVGMLRPELERNPHMGSLRNGAVPVGN----TLRWLAGGQMHDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPENRRITTAS 90
            AF+ L  +L P L R+PH   ++ G + V N    TLR+ AGG MHDI++   ++K++ Y+    V+ AINA   L   +P +     AS
Sbjct:   56 AFVQLEDLLAPTLHRSPHAW-VQRGYISVDNALQLTLRYFAGGSMHDIRRVAGVSKASFYRILWLVVDAINAVSELRLVFPRSPTAREAS 144
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1316.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6A3QK27_9STRA5.210e-736.67DDE Tnp4 domain-containing protein n=2 Tax=Phytoph... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1316contigP-littoralis_Contig1316:36430..36723 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1316.13.1mRNA_P-littoralis_Contig1316.13.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1316 36278..36813 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1316.13.1 ID=prot_P-littoralis_Contig1316.13.1|Name=mRNA_P-littoralis_Contig1316.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=94bp
MDHDAFMDLVGMLRPELERNPHMGSLRNGAVPVGNTLRWLAGGQMHDIKQ
GHVIAKSTAYQTAVRVIKAINACEALECRWPENRRITTASRPG*
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