prot_P-littoralis_Contig130.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig130.7.1
Unique Name	prot_P-littoralis_Contig130.7.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	426

Homology

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BLAST of mRNA_P-littoralis_Contig130.7.1 vs. uniprot
Match: A0A6H5J557_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J557_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 1.320e-40
Identity = 142/435 (32.64%), Postives = 204/435 (46.90%), Query Frame = 0

Query:    1 MVQNAVVYYQCLVTKRRIGTTNTEGRDAHAKQNYLDHTVPAFFAWWDKSCKLPIPAWLTPKLMGQSTLTDQTNRLYTVDGAIW---SKYSEAGKVIKRDFNLLWDSFRTADGELPSGQQETDAWENLQNGLYYTWKKENEKVKMGNKRNKAAKNNPVVLTGGEGDQTLSGESTAAREKAQQXXXXXVAAARQGATADSQSAPISTVSAVAAKWMAQQAAESVRADITGTKEGQATPIKKKGQGGXXXXXXXXXXXXXXGASGDAQRARDVAK-FGDRPDDWINPFSLAFVLFGRPAGEQEDVDLKCKVSGGGKTGAAATAAVEPGGADVGSAAKAHG------LGRHDLANLDGAGGGAGGQQSRAAVKKERHVANSEAKRAEESKATAKFRAEALKAMTAPVESSESSKRLALSVETLTRTAVLRQRLAEEGAE 425
            ++QNA  YYQCLVTKR  GT +T+ RDAHA+ NY + TVP+F  WW        P+WLT  LMG +T  D  +   TV    W   S Y  A +            F   DG+LPSG Q  D WENLQ  L++  ++   + K     N  AK+ P+VLTG +  +T +G                V  A  G     ++ P+   S  A ++   +A   V A     K   A  +++   G                 +GDA+   D+ + +G +P+ W++P SL F +FGRPAG  EDVDLK K++ G  +G                            L    L  ++    GAGG+ SRA +K   H  N+E K+ + ++A A  +  AL+A++ P E S+SS  L  SV+ LTR  V ++ L +E AE
Sbjct:   33 LIQNAAAYYQCLVTKREAGTMSTQQRDAHARTNYKNFTVPSFLCWWKTVVIQTPPSWLTQDLMGMTTGNDSGSTTPTV----WFGPSTYRVAVRSGGTSTESGTGDF-LVDGDLPSGMQAEDIWENLQLYLWFEDRRTAGRKKEVAAANARAKSQPIVLTGDDDGETEAG----------------VEGAGAGEGGGKEAGPLGH-SEAALRYATAKALARVEA-ARNNKGEDADVVEEIAAGIKPETADEEEGKEPEETAGDAETEDDLTRLYGPKPEHWLHPASLVFAIFGRPAGTNEDVDLKLKMTSGRPSGTKXXXXXXXXXXXXXXXXXXXEDESKPCLSTKGLKLMN----GAGGKHSRAEMKTLAHEVNAENKKLKGAEADAVLKRRALEALSTPPEDSKSSLELVESVKALTRAVVSKELLDQEQAE 440

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig130.7.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig130.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5J557_9PHAE	1.320e-40	32.64	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 355..375
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..273

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig130	contig	P-littoralis_Contig130:33830..36551 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig130.7.1	mRNA_P-littoralis_Contig130.7.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig130 32502..36567 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig130.7.1 ID=prot_P-littoralis_Contig130.7.1|Name=mRNA_P-littoralis_Contig130.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=426bp
MVQNAVVYYQCLVTKRRIGTTNTEGRDAHAKQNYLDHTVPAFFAWWDKSC
KLPIPAWLTPKLMGQSTLTDQTNRLYTVDGAIWSKYSEAGKVIKRDFNLL
WDSFRTADGELPSGQQETDAWENLQNGLYYTWKKENEKVKMGNKRNKAAK
NNPVVLTGGEGDQTLSGESTAAREKAQQQSEEEVAAARQGATADSQSAPI
STVSAVAAKWMAQQAAESVRADITGTKEGQATPIKKKGQGGEGGTQEDEE
DEDQDGASGDAQRARDVAKFGDRPDDWINPFSLAFVLFGRPAGEQEDVDL
KCKVSGGGKTGAAATAAVEPGGADVGSAAKAHGLGRHDLANLDGAGGGAG
GQQSRAAVKKERHVANSEAKRAEESKATAKFRAEALKAMTAPVESSESSK
RLALSVETLTRTAVLRQRLAEEGAE*