mRNA_P-littoralis_Contig13.49.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 124 bits (312), Expect = 5.270e-31 Identity = 64/115 (55.65%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 1 LRWARRWTVPTAEVPAGGTRRFSGMRNVVCVDEK*FYICNVKQRYYVRDNEPAPSRQVQHKSHITKVMFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETMVT 345
L WA RW P+A G +F + + +DEK FYIC QRYY + E P R+VQHKSH+ KVMFL AVARPR +++ + FDGKIG+YPFT Q AAQRN RN AA TMVT
Sbjct: 34 LSWALRWVRPSA----GDAHKFHHFFDFLHLDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVT 144
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Match: A0A6A4ZGT3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZGT3_9STRA) HSP 1 Score: 105 bits (263), Expect = 6.890e-25 Identity = 50/100 (50.00%), Postives = 68/100 (68.00%), Query Frame = 1
Query: 43 PAGGTRRFSGMRNVVCVDEK*FYICNVKQRYYVRDNEPAPSRQVQHKSHITKVMFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETMV 342
P G F M + V VDEK FY+ VK+RYYV D+E +R +HKSHITK+MFL AVARPR + + FDGKIG++PF ++ A+R+S+NR T++
Sbjct: 76 PTSGGTTFVNMHDYVHVDEKWFYLTKVKRRYYVYDDEEVAARACKHKSHITKIMFLAAVARPRYDPHTRSFFDGKIGVWPFVQESVAKRSSKNRPRGTVI 175
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Match: UPI000E6FC8C0 (uncharacterized protein LOC113311561 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC8C0) HSP 1 Score: 99.4 bits (246), Expect = 7.600e-23 Identity = 50/91 (54.95%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 73 MRNVVCVDEK*FYICNVKQRYYVRDNEPAPSRQVQHKSHITKVMFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETMVT 345
M N V +DEK FY+ Q+YY+ E P R + K ITKVMFL VARPR ++ NN F GKIG++PFT QE AQRNS+NR A TM T
Sbjct: 1 MYNYVHIDEKWFYMTKESQKYYLLPEEDEPLRSCKSKCFITKVMFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMET 91
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Match: UPI000E6FD0CA (uncharacterized protein LOC113359240 n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FD0CA) HSP 1 Score: 98.6 bits (244), Expect = 2.000e-22 Identity = 50/94 (53.19%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 64 FSGMRNVVCVDEK*FYICNVKQRYYVRDNEPAPSRQVQHKSHITKVMFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETMVT 345
F M N V +DEK FY+ Q+YY+ E P R + K ITKVMFL VARPR ++ NN F GKIG++ FT QE AQRNS+NR A TM T
Sbjct: 101 FKSMYNYVHIDEKWFYMTKESQKYYLLPKEDEPLRSCKSKRFITKVMFLAVVARPRYDSANNEEFSGKIGIFSFTFQEPAQRNSKNRTAGTMET 194
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Match: A0A485K9W7_9STRA (Aste57867_2336 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K9W7_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.380e-22 Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = 1
Query: 46 AGGTRRFSGMRNVVCVDEK*FYICNVKQRYYVRDNEPAPSRQVQHKSHITKVMFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETMV 342
+ G F+ M + V VDEK F++ VK+RYYV DNE SR VQ K HITKV+FL A+ARPR + + FDGK+G++PF + E AQ +S NR T +
Sbjct: 47 SNGYHIFTNMYDHVHVDEKWFFLTKVKRRYYVFDNEEVASRAVQSKGHITKVLFLAAIARPRYDCRSKRFFDGKLGVWPFVKVEPAQCSSENRPRGTPI 145
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Match: A0A024USS9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USS9_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 5.930e-22 Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 52 GTRRFSGMRNVVCVDEK*FYICNVKQRYYVRDNEPAPSRQVQHKSHITKVMFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETMVT 345
GTRR+ M +V +DEK FYI V +R+Y+ +E P R+ Q K HITKVMFL AVARPR ++ + +DGK GL+PF + A+R S+NR T VT
Sbjct: 87 GTRRWHDMMGIVHIDEKLFYITQVNRRFYLWHDEAVPQRKAQSKRHITKVMFLCAVARPRHDSQRHAMWDGKAGLWPFVETKLAKRKSKNRDRGTPVT 184
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 7.910e-22 Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 1
Query: 52 GTRRFSGMRNVVCVDEK*FYICNVKQRYYVRDNEPAPSRQVQHKSHITKVMFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETMVT 345
G R++ M + V +DEK FYI V +R+Y+ +EP P R+ Q K HITKVMFL AVARPR ++ + +DGK+GL+PF + A+R S+NR T VT
Sbjct: 159 GRRQWHDMLDCVHIDEKWFYITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVT 256
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Match: W4GLA0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GLA0_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 8.900e-22 Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 16 RWTVPTAEVPAGGTRRFSGMRNVVCVDEK*FYICNVKQRYYVRDNEPAPSRQVQHKSHITKVMFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETMVT 345
R+ +P + G FS M + V VDEK FY+ VK+RYYV D+E +R V+ K +ITKVMFLG VARPR +DGK+G++PF + A R S+NR T+VT
Sbjct: 151 RYAMPFVRPLSNGRHSFSNMLDFVHVDEKWFYLTKVKRRYYVYDDEEVAARSVKPKHYITKVMFLGPVARPRYGHHCKKFWDGKVGVWPFVQVSPALRGSKNRRKGTLVT 260
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Match: UPI0007EEFD65 (uncharacterized protein LOC108203252 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EEFD65) HSP 1 Score: 94.4 bits (233), Expect = 9.520e-22 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 58 RRFSGMRNVVCVDEK*FYICNVKQRYYVRDNEPAPSRQVQHKSHITKVMFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETM 339
R + GM ++V +DEK FY+ + Q+ Y+ +EP P R + K ITKVMF+ AVARPR + N FDGKIG++PFT++E A R S+NRA M
Sbjct: 21 RTYIGMFSIVHIDEKWFYMTRISQKDYLLPSEPEPHRISKSKRFITKVMFISAVARPRFDNDGNCIFDGKIGIFPFTKEEVAVRTSKNRANGVM 114
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Match: UPI001D01A7AC (uncharacterized protein LOC123171070 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D01A7AC) HSP 1 Score: 97.1 bits (240), Expect = 2.570e-21 Identity = 49/95 (51.58%), Postives = 62/95 (65.26%), Query Frame = 1
Query: 61 RFSGMRNVVCVDEK*FYICNVKQRYYVRDNEPAPSRQVQHKSHITKVMFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETMVT 345
+F M NV+ +DEK FY Q YY+ ++E P R Q K+ I KVMFL AVARPR + FDGK+G++PFT QEAA+R S+NR TMVT
Sbjct: 120 KFKEMYNVIHIDEKWFYRSRGSQNYYLANDEEDPYRSTQSKNFIEKVMFLAAVARPRFDANGTMIFDGKLGIWPFTYQEAAKRKSKNRDVGTMVT 214 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig13.49.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig13.49.1 >prot_P-littoralis_Contig13.49.1 ID=prot_P-littoralis_Contig13.49.1|Name=mRNA_P-littoralis_Contig13.49.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=48bp MFLGAVARPRRNTTNNTGFDGKIGLYPFTRQEAAQRNSRNRAAETMVTback to top mRNA from alignment at P-littoralis_Contig13:260856..261200+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig13.49.1 ID=mRNA_P-littoralis_Contig13.49.1|Name=mRNA_P-littoralis_Contig13.49.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=345bp|location=Sequence derived from alignment at P-littoralis_Contig13:260856..261200+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig13:260856..261200+ >mRNA_P-littoralis_Contig13.49.1 ID=mRNA_P-littoralis_Contig13.49.1|Name=mRNA_P-littoralis_Contig13.49.1|organism=Pylaiella littoralis U1_48|type=CDS|length=144bp|location=Sequence derived from alignment at P-littoralis_Contig13:260856..261200+ (Pylaiella littoralis U1_48)back to top |