prot_P-littoralis_Contig1296.10.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1296.10.1
Unique Nameprot_P-littoralis_Contig1296.10.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length279
Homology
BLAST of mRNA_P-littoralis_Contig1296.10.1 vs. uniprot
Match: A0A6H5JMZ6_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ6_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.590e-30
Identity = 101/219 (46.12%), Postives = 121/219 (55.25%), Query Frame = 0
Query:    2 RRRRSTSTGSAPALQGSGRKRGSSR--PRTISARISEDSPQYYG-DALPGDDDSDTSSVNSLMSIVSTPEISHRQVTRQQTQYRFGESHRAGSVTGSPESSRRPS--HGKITRGMSPSLSSSAAARQPGASVGRNSSSQSLSALAPGLSSLASXXXXXXXXXSLLRWCGVCDAEFTRLRRPHRCRQCLEAVCASCSPARLPVPGTGSLELKRTCKACTG 215
            RRR+  S GS       GR+R SSR  P   +A  SE   +    D+     +SDTSSVNS +S VSTPEIS RQ  R+  Q R  +     SV GSP+ +RR    HG ITR  S                   S+S S+ + AP LS  +               CGVC+AEFTRLRRPHRCR+C+EAVCASCSP RLPVPG+GSLE KRTC+ C G
Sbjct:   64 RRRQQPSPGSGLKTPHDGRRRPSSRFRPHAHAASNSEFRERTTSRDSSVAGGESDTSSVNSRLSTVSTPEISQRQ--RKMLQQRHQQVVGPASVAGSPDRTRRSRVPHGSITRSSS-------------------SASTSVVSSAPSLSQQS---------------CGVCEAEFTRLRRPHRCRRCMEAVCASCSPLRLPVPGSGSLEPKRTCRLCAG 246          
BLAST of mRNA_P-littoralis_Contig1296.10.1 vs. uniprot
Match: A0A6H5JBA2_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA2_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 3.480e-27
Identity = 100/227 (44.05%), Postives = 122/227 (53.74%), Query Frame = 0
Query:   24 SSRPRTISARISEDSPQYYGDALPGDDDSDTSSV---NSLMSIVSTPEISHRQ-VTRQQ------------TQYRFGESHRAGS-VTGSPESSRRPSHGKITRGMSPSLSSSAAARQPGASVGRNSSSQSLSALAPGLSSLASXXXXXXXXXSLLRWCGVCDAEFTRLRRPHRCRQCLEAVCASCSPARLPVPGTGSLELKRTCKACTGN--LVGPQIDAVASPHRR 231
            S R R     +S  S      +L GDD SDT SV   +S +SIVSTPEIS R+  TR+Q               R      A + + GSP SS   S G   R    + S SA   +P  ++ R +SS SLS+                   +LLRWC VC+ EFT+LRRPHRCR+CLE VCA CSPARLPVPG GSLELKRTCK C G+     P++ A A+P RR
Sbjct:   34 SRRRRQQRGSVSRSSYDSDASSLAGDD-SDTCSVASTSSRLSIVSTPEISGRKWQTRKQXXXXXXXXXXXSNSLRSSLGRPAATPLVGSPGSS--VSGGGSRRSSWSTASMSAVGTRPRGTLTRTNSSSSLSS---------------ELSMTLLRWCAVCEGEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVGDDAAAAPRVGA-ATPSRR 241          
BLAST of mRNA_P-littoralis_Contig1296.10.1 vs. uniprot
Match: D8LGV1_ECTSI (FYVE, RhoGEF and PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV1_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 4.740e-24
Identity = 64/116 (55.17%), Postives = 75/116 (64.66%), Query Frame = 0
Query:  159 SLLRWCGVCDAEFTRLRRPHRCRQCLEAVCASCSPARLPVPGTGSLELKRTCKACTGN--LVGPQIDAVASPHRRAVAAIPATATXXXXXXXAGILRGAHARASSMTRTSLGVLSE 272
            +LLRWC VC+AEFT+LRRPHRCR+CLE VCA CSPARLPVPG GSLELKRTCK C G+     P + A A+P RR  A   A A        A I +   A   S  R  +G+LS+
Sbjct:  309 TLLRWCAVCEAEFTQLRRPHRCRRCLEPVCAPCSPARLPVPGAGSLELKRTCKLCVGDDAAAAPLVGA-AAPSRRPNAVGAAAAPSPRV---ARITKRRSASMGSAARAPVGILSK 420          
BLAST of mRNA_P-littoralis_Contig1296.10.1 vs. uniprot
Match: D8LNU4_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNU4_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 4.250e-22
Identity = 63/127 (49.61%), Postives = 75/127 (59.06%), Query Frame = 0
Query:   91 SVTGSPESSRRPS--HGKITRGMSPSLSSSAAARQPGASVGRNSSSQSLSALAPGLSSLASXXXXXXXXXSLLRWCGVCDAEFTRLRRPHRCRQCLEAVCASCSPARLPVPGTGSLELKRTCKACTG 215
            SV GSP+ +RR    HG ITR  S                   S+S S+++ AP LS  +               CGVC+AEFTRLRRPHRCR+C+EAVCASCSP RLPVPG+GSLE KRTC+ C G
Sbjct:   14 SVAGSPDRTRRSRVPHGSITRSSS-------------------SASTSVASSAPSLSQQS---------------CGVCEAEFTRLRRPHRCRRCMEAVCASCSPLRLPVPGSGSLEPKRTCRLCAG 106          
BLAST of mRNA_P-littoralis_Contig1296.10.1 vs. uniprot
Match: D7FJP7_ECTSI (Rho guanine nucleotide exchange factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP7_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 1.080e-13
Identity = 41/72 (56.94%), Postives = 48/72 (66.67%), Query Frame = 0
Query:  164 CGVCDAEFTRLRRPHRCRQCLEAVCASCSPARLPVPGTGSLELKRTCKACTGNLVGPQIDAVASPHRRAVAA 235
            CGVC AEFTR RRPHRCR C +AVCA+CSPARLP         KRTCK C G+   P++  V SP R  ++A
Sbjct:  150 CGVCRAEFTRYRRPHRCRACGKAVCATCSPARLP---------KRTCKPCAGDSAIPRVFPVVSPARGRISA 212          
BLAST of mRNA_P-littoralis_Contig1296.10.1 vs. uniprot
Match: A0A6H5KYW1_9PHAE (FYVE-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW1_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.990e-13
Identity = 39/67 (58.21%), Postives = 45/67 (67.16%), Query Frame = 0
Query:  164 CGVCDAEFTRLRRPHRCRQCLEAVCASCSPARLPVPGTGSLELKRTCKACTGNLVGPQIDAVASPHR 230
            CGVC AEFTR RRPHRCR C + VCA+CSPARLP         KRTCK C G+   P++ +V SP R
Sbjct:  173 CGVCRAEFTRYRRPHRCRACSKVVCATCSPARLP---------KRTCKPCAGDSAIPRVFSVVSPAR 230          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1296.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JMZ6_9PHAE1.590e-3046.12FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JBA2_9PHAE3.480e-2744.05FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LGV1_ECTSI4.740e-2455.17FYVE, RhoGEF and PH domain-containing protein n=1 ... [more]
D8LNU4_ECTSI4.250e-2249.61FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FJP7_ECTSI1.080e-1356.94Rho guanine nucleotide exchange factor n=1 Tax=Ect... [more]
A0A6H5KYW1_9PHAE1.990e-1358.21FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 150..219
e-value: 1.8E-4
score: 27.4
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 162..216
e-value: 2.3E-9
score: 37.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 150..219
e-value: 4.0E-12
score: 47.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..101
NoneNo IPR availableCDDcd00065FYVE_like_SFcoord: 164..213
e-value: 3.80512E-12
score: 57.9272
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 164..218
score: 9.880358
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 159..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1296contigP-littoralis_Contig1296:27750..28586 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1296.10.1mRNA_P-littoralis_Contig1296.10.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1296 27750..28586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1296.10.1 ID=prot_P-littoralis_Contig1296.10.1|Name=mRNA_P-littoralis_Contig1296.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=279bp
RRRRRSTSTGSAPALQGSGRKRGSSRPRTISARISEDSPQYYGDALPGDD
DSDTSSVNSLMSIVSTPEISHRQVTRQQTQYRFGESHRAGSVTGSPESSR
RPSHGKITRGMSPSLSSSAAARQPGASVGRNSSSQSLSALAPGLSSLASM
PSASSSSSSLLRWCGVCDAEFTRLRRPHRCRQCLEAVCASCSPARLPVPG
TGSLELKRTCKACTGNLVGPQIDAVASPHRRAVAAIPATATPAAAAPAAG
ILRGAHARASSMTRTSLGVLSEVATSVTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD