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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001680 | WD40 repeat | SMART | SM00320 | WD40_4 | coord: 489..528
e-value: 0.42
score: 19.4
coord: 594..634
e-value: 5.0
score: 12.6
coord: 154..193
e-value: 0.0016
score: 27.7
coord: 47..90
e-value: 390.0
score: 0.6
coord: 106..144
e-value: 64.0
score: 5.6 |
| IPR001680 | WD40 repeat | PFAM | PF00400 | WD40 | coord: 160..193
e-value: 0.0089
score: 16.9 |
| IPR001680 | WD40 repeat | PROSITE | PS50082 | WD_REPEATS_2 | coord: 161..193
score: 11.176815 |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | GENE3D | 2.130.10.10 | | coord: 467..649
e-value: 3.7E-10
score: 41.2 |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | GENE3D | 2.130.10.10 | | coord: 50..351
e-value: 7.3E-15
score: 56.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 304..327 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 367..445 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 381..427 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 288..327 |
| None | No IPR available | PANTHER | PTHR44019 | WD REPEAT-CONTAINING PROTEIN 55 | coord: 70..630 |
| None | No IPR available | PROSITE | PS50294 | WD_REPEATS_REGION | coord: 161..193
score: 9.361965 |
| IPR036322 | WD40-repeat-containing domain superfamily | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 59..632 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig128.15.1 ID=prot_P-littoralis_Contig128.15.1|Name=mRNA_P-littoralis_Contig128.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=656bp
MKGITTKLRERPAHQGSLSTKFPWSLQPVSRIVGQRPLEFTRRKAWIAAP
VRFGNGISAVTSLCLCDEASTGGPSLLISGDEDGGVSVVKVEGGGDDLSA
SGCFATPELRRVRLHSSCVNTIKVLPDQRGYVCAGDDGALSAVASFEASS
EEDLRRATFALTGHSGFVTDCDTAQSGHAVLSSSTDGRMLLWDPVASNTP
VTIISVGRPLNSVCFSAGDPYALLCAPELGTACSSRGGGGGSGSSSGENG
VGGADLVQIWDLRFLRCFKDFIPAAVATAFGEDPSVSAPHAASMQPPPPQ
SPQIWSASTWSSDSSSSGPATVRSSVARTPSQVPSWLTTALGSTSAVSPA
TPLLRRSAWTNDSSDAESSEKRWSRGRGSLWSCGTPESTERENTIPASSP
WSETRRGSEYASTPSRNPTSSVKEQGPSMPARMTAPRRDGPSASLRVTSL
PASGCLHEKNGKTWVPGNLKTWQASNRRARAAGARERAGVACVACSGSTN
TSAFSVQVSGDGTRILVASRDRTVTLFDAQSREVVYRFGHPRLSTRACPI
FVEGDQVGGARGWGRGRGGSGGGYTFGGMMEGEVRCWRVGSQFPNRVFKS
AVHHEGFEVCSLATSRNGGMFASADSSGMVCVQSATWGREAQDGSGEGAG
HHEGK* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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