mRNA_P-littoralis_Contig1272.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1272.5.1
Unique NamemRNA_P-littoralis_Contig1272.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Match: D7FIH5_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH5_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 2.500e-70
Identity = 124/209 (59.33%), Postives = 157/209 (75.12%), Query Frame = 1
Query:    1 GGYTTGTYNGVASEGLEDFVALKLDSDGNVEWIWQDGSDEEDIIEACTLTADGNVVLAGFTNGEWLGSQPGTSAIAAVKLDVTDGSVVWDYQAGVTTFYVVAWGAAGRSDGSVVLVGPTEGVWGDEQIGTTDFVAVALDEDGGELWRWQDGAEFSYSAIRGVAALSDGSLVLVGSTTGD*SGTGNEYAEDTDFVVVKLTAGGVLEWTWQ 627
            GGY+ GT +GV SEGL DF+A+K DSDG  EW WQ+G++++++I  C+ TADGNVVL G T G+W  +  G  A+ AVKLDV+DGSV+W YQAGV ++ VV+ GAA R+DGS+V+ G T+G W  E  G  DF +VALDEDG ELWR+QDG+ FS S+  GVAALSDGS+VL G+T GD +GT N  A+D  F VVKLT  GVL+WTWQ
Sbjct:   94 GGYSNGTLSGVVSEGLGDFIAIKFDSDGTEEWRWQEGTEKDEVISTCSKTADGNVVLTGLTQGDWEETNTGLWALVAVKLDVSDGSVIWRYQAGVPSYSVVSRGAASRADGSIVIGGTTDGDWDGELTGYADFFSVALDEDGSELWRFQDGSLFSISSAWGVAALSDGSVVLAGTTDGDYAGT-NAGAQD--FAVVKLTEEGVLDWTWQ 299          
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Match: D7FIH4_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH4_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 2.340e-67
Identity = 124/208 (59.62%), Postives = 153/208 (73.56%), Query Frame = 1
Query:    4 GYTTGTYNGVASEGLEDFVALKLDSDGNVEWIWQDGSDEEDIIEACTLTADGNVVLAGFTNGEWLGSQPGTSAIAAVKLDVTDGSVVWDYQAGVTTFYVVAWGAAGRSDGSVVLVGPTEGVWGDEQIGTTDFVAVALDEDGGELWRWQDGAEFSYSAIRGVAALSDGSLVLVGSTTGD*SGTGNEYAEDTDFVVVKLTAGGVLEWTWQ 627
            G+  GT NGVASEGL DF+A+K DSDG  EW WQDG++ ++ I  C+ TADGNVVL G T G+W+ +  G  A+ AVKLDVTDGSV+W YQAGV +  VV+ G+A R+DGS+V+ G T+G W  E  G TDF  VALDEDG ELWR+QDG+  S S+  GVAALSDGS+VL G+T G+ +GT N  A+D  F VVKLT  GVL+WTWQ
Sbjct:   41 GFFNGTLNGVASEGLGDFIAIKFDSDGTEEWRWQDGTEMDEGITTCSKTADGNVVLTGSTLGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSQSVVSRGSASRADGSIVIGGVTDGDWDGELTGFTDFFTVALDEDGSELWRFQDGSLLSSSSAWGVAALSDGSVVLAGTTDGNYAGT-NAGAQD--FAVVKLTEEGVLDWTWQ 245          
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Match: A0A6H5L7T2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T2_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 2.620e-67
Identity = 122/208 (58.65%), Postives = 153/208 (73.56%), Query Frame = 1
Query:    4 GYTTGTYNGVASEGLEDFVALKLDSDGNVEWIWQDGSDEEDIIEACTLTADGNVVLAGFTNGEWLGSQPGTSAIAAVKLDVTDGSVVWDYQAGVTTFYVVAWGAAGRSDGSVVLVGPTEGVWGDEQIGTTDFVAVALDEDGGELWRWQDGAEFSYSAIRGVAALSDGSLVLVGSTTGD*SGTGNEYAEDTDFVVVKLTAGGVLEWTWQ 627
            G+  GT NGV SEGL DF A+K DSDG  EW WQDG++++++I  C+ TADGNVVL G T G+W+ +  G  A+ AVKLDVTDGSV+W YQAGV ++ VV+ GAA R+DGS+V+ G T+G W  E  G  DF +VAL+EDG ELWR+QDG+EFS S+  GVAALSDGS+VL G T GD + T    A + DF +VKLT  GVL+WTWQ
Sbjct:   98 GFYNGTLNGVPSEGLGDFFAIKFDSDGTEEWRWQDGTEKDEVILTCSKTADGNVVLTGMTQGDWVETNTGLWALVAVKLDVTDGSVIWQYQAGVPSYSVVSRGAASRADGSIVIGGSTDGDWDGELTGYADFFSVALNEDGSELWRFQDGSEFSISSAWGVAALSDGSVVLAGVTDGDYAETN---AGEQDFALVKLTEEGVLDWTWQ 302          
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.000e-32
Identity = 86/189 (45.50%), Postives = 112/189 (59.26%), Query Frame = 1
Query:   37 SEGLEDFVALKLDSDGNVEWIWQDGSDEEDIIEACTLTADGNVVLAGFTNGEWLGSQPGTSA-IAAVKLDVTDGSVVWDYQAGVTTFYVVAWGAAGRSDGSVVLVGPTEG--VWGDEQIGTTDFVAVALDEDGGELWRWQDGAEFSYSAIRGVAALSDGSLVLVGSTTGD*SGTGNEYAEDTDFVVVKL 594
            S G  DFVA+KLDS G   W WQDG+   D I+A   T DG VVLAG+T GEW G   G     AAVKLD  +G+ VW +Q G    Y V +  + + DG+V+L G T G  V  D+++G++D   V L  DG E+WRW+ G+      +RG+AA SDG +V+VGS  G   G  N  +ED  F+VV L
Sbjct:  185 SVGSLDFVAIKLDSGGTTLWTWQDGTSSSDEIQAAAATGDGFVVLAGYTFGEWSGGLTGEECDFAAVKLDA-NGTEVWRWQGGYEVEYNVIYAVSVQEDGTVLLAGRTGGSQVMSDKRVGSSDIATVMLGADGQEIWRWKQGSSSDDFMLRGMAAGSDGRMVMVGSINGSWGGEPNLGSED--FLVVLL 370          
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Match: D7FXY5_ECTSI (von Willebrand factor type D domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY5_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 7.570e-32
Identity = 90/211 (42.65%), Postives = 114/211 (54.03%), Query Frame = 1
Query:    4 GYTTGTYNGVASEGLEDFVALKLDS-DGNVEWIWQDGSDEEDIIEACTLTADGN-VVLAGFTNGEWLGSQPGTSA-IAAVKLDVTDGSVVWDYQAGVTTFYVVAWGAAGRSDGSVVLVGPTEGVWGDEQIGTTDFVAVALDEDGGELWRWQDGAEFSYSAIRGVAALSDGSLVLVGSTTGD*SGTGNEYAEDTDFVVVKLTAGGVLEWTWQ 627
            G+T G ++G AS G  DFVA+ + S DG+  W WQDG++E+D++        G+ VVLAG T G+W  +  G     AAVKL+  DGS +W +Q G +    +   AA   D +VVL G TEG  G +  G TD   V LD DGG LWRWQ G   S       A   DGS+V+ G T G   G+     ED D VVVKL   G   W WQ
Sbjct:  113 GFTKGGWDGAASAGGSDFVAVSVASGDGSQLWSWQDGTEEDDVLMGVVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDD-TVVLAGYTEGSLGGDNAGETDCAVVKLDADGGVLWRWQGGTAES-DVCSAAAVAEDGSIVVAGYTVGSWGGSEANAGED-DLVVVKLDKDGNELWHWQ 320          
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Match: A0A6H5JF09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF09_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 9.070e-31
Identity = 92/211 (43.60%), Postives = 114/211 (54.03%), Query Frame = 1
Query:    4 GYTTGTYNGVASEGLEDFVALKLDS-DGNVEWIWQDGSDEEDIIEACTLTADGN-VVLAGFTNGEWLGSQPGTSA-IAAVKLDVTDGSVVWDYQAGVTTFYVVAWGAAGRSDGSVVLVGPTEGVWGDEQIGTTDFVAVALDEDGGELWRWQDGAEFSYSAIRGVAALSDGSLVLVGSTTGD*SGTGNEYAEDTDFVVVKLTAGGVLEWTWQ 627
            G+T G +NG AS G  DFVA+ L S DG+  W WQDG++E+D++        G+ VVLAG T G+W  +  G     AAVKL+  DGS +W +Q G +    +   AA   D +VVL G T+G  G    G TD   V LD DGG LWRWQ G   S      V A  DGS+VL G T G   G+     E+ D VVVKL   G   W WQ
Sbjct:   60 GFTKGGWNGAASAGGSDFVAVSLASGDGSRLWSWQDGTEEDDVLVGLVERGGGSAVVLAGRTGGDWADANAGEGTDFAAVKLEAGDGSEIWRFQDGSSGDDTLKSVAAAEDD-TVVLAGYTDGSLGGVNAGETDCTVVKLDADGGVLWRWQGGTAESDVCSATVVA-EDGSIVLAGYTVGSWDGSEANAGEE-DLVVVKLDKDGNELWHWQ 267          
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Match: D7G371_ECTSI (Hemolysin-type calcium-binding region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G371_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.530e-20
Identity = 67/168 (39.88%), Postives = 86/168 (51.19%), Query Frame = 1
Query:   40 EGLEDFVALKLDSDGNVEWIWQDGSDEEDIIEACTLTADGNVVLAGFTNGEWLGSQPGTSAIAAVKLDVTDGSVVWDYQAGVTTFYVVAWGAAGRSDGSVVLVGPTEGVWGDEQIG---TTDFVAVALDEDGGELWRWQDGAEFSYSAIRGVAALSDGSLVLVGSTTG 534
            +G  DF A KLDS GNV W WQ  +D  + + +     D + +L G T G + G+  G +   AVKLD   G+ VW +Q G     VV    A   DGS VL G T G W  +      + DF AV L  DG E+WRWQDG       + G A   DGS+VL G++ G
Sbjct:   44 DGGTDFAACKLDSSGNVTWRWQATTDGLNAVSSIAPAND-SFILGGRTTGNFNGTSAGGTDFVAVKLD-DSGTEVWRWQDGTVQDDVVE-AVAHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTED-DTLEGAAIQEDGSVVLSGNSGG 207          
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Match: A0A6H5LJ25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ25_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.920e-20
Identity = 67/164 (40.85%), Postives = 85/164 (51.83%), Query Frame = 1
Query:   52 DFVALKLDSDGNVEWIWQDGSDEEDIIEACTLTADGNVVLAGFTNGEWLGSQPGTSAIAAVKLDVTDGSVVWDYQAGVTTFYVVAWGAAGRSDGSVVLVGPTEGVWGDEQIG---TTDFVAVALDEDGGELWRWQDGAEFSYSAIRGVAALSDGSLVLVGSTTG 534
            DF A KLDS GNV W WQ  +D  D + +    A+G+ VL G T G++ G+  G +   AVKLD   G+ VW +Q G      V        DGS VL G T G W  +      + DF AV L  DG E+WRWQDG       + G A   DGS+VL G++ G
Sbjct:  174 DFAACKLDSSGNVTWRWQATTDGLDAVSSIA-PANGSFVLGGRTTGDFNGTSAGGTDFVAVKLD-DSGTEVWRWQDGTAEDDFVE-AVVHSDDGSAVLAGHTYGSWSSDNADGSFSKDFAAVMLSSDGKEIWRWQDGTTED-DTLEGAAIQGDGSVVLSGNSGG 333          
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 7.030e-20
Identity = 70/206 (33.98%), Postives = 104/206 (50.49%), Query Frame = 1
Query:    4 GYTTGTYNGVASEGLEDFVALKLDSDGNVEWIWQDGSDEEDIIEACTLTADGNVVLAGFTNGEWLGSQPGTSA-IAAVKLDVTDGSVVWDYQAGVTTFYVVAWGAAGRSDGSVVLVGPTEGVWGDEQ------IGTTDFVAVALDEDGGELWRWQDGAEFSYSAIRGVAALSDGSLVLVGSTTGD*SGTGNEYAEDTDFVVVKLTA 600
            G T+G ++G+ S G  DF+A+KLD++GN  W WQDG+   D +EA   T DG                       AAVK+D  +G+ VW +Q G    Y      A + DG+V+L G +    GD        +G ++  AV L  DG E+WRW+  +      +RG+AA S+G +++VG+T G   G  N  +ED   V+   T+
Sbjct:    3 GQTSGDFSGI-SVGSNDFIAIKLDAEGNELWTWQDGTSGGDFVEAAAATGDGXXXXXXXXXXXXXXXXXXXXXDFAAVKIDA-NGTEVWRWQGGYAVQYNGMHAVAVQEDGTVLLTGRS----GDYNAVAVSGVGASEIAAVMLGVDGEEVWRWKQASSPDVFQVRGMAAGSNGRMLMVGNTNGSWIGDPNLGSEDFLLVMFNTTS 202          
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Match: A0A6H5JLD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD3_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.970e-17
Identity = 83/201 (41.29%), Postives = 100/201 (49.75%), Query Frame = 1
Query:   52 DFVALKLDSD-GNVEWIWQDGSDE-EDIIEACTLTADGNVVLAGFTNGEWLGSQ-PGTSAIAAVKLDVTDGSVVWDYQAGVTTF----YVVAW--GAAGRSDGSVVLVGPTEG--VWGDEQIGTTDFVAVALDE-DGGELWRWQDGAEFSYSAIRGVAALSDGSLVLVGSTTGD*SGTGNEYAEDTDFVVVKLTA--GGVL 612
            DF A+KLD D G   W W D S +  D + +    +  NV+L GFTNGEW  S   G   IAAVKLD   G+ VW YQA  +T     Y V++  G A  S    VLVG T    V G    G  DF A+ LD   GGELWR Q G  F+   + G    S G LV  G          NE A + +F+VVKL+   G VL
Sbjct:   62 DFSAVKLDGDSGETLWTWVDSSLQGADWMTSAGADSASNVILGGFTNGEWGTSNLDGLRDIAAVKLDGEAGTEVWRYQAAASTSSFGGYGVSYVLGVAVDSTDHPVLVGTTYNNLVDGVGVPGDWDFFAIKLDGMTGGELWRVQGGVAFTREGLLGAKVDSSGDLVAAGYAA-------NEDASELNFLVVKLSGSDGSVL 255          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1272.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIH5_ECTSI2.500e-7059.33Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
D7FIH4_ECTSI2.340e-6759.62Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
A0A6H5L7T2_9PHAE2.620e-6758.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHV1_ECTSI1.000e-3245.50Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FXY5_ECTSI7.570e-3242.65von Willebrand factor type D domain protein n=1 Ta... [more]
A0A6H5JF09_9PHAE9.070e-3143.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G371_ECTSI1.530e-2039.88Hemolysin-type calcium-binding region n=1 Tax=Ecto... [more]
A0A6H5LJ25_9PHAE2.920e-2040.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRE9_ECTSI7.030e-2033.98Transmembrane receptor kinase n=2 Tax=Ectocarpus s... [more]
A0A6H5JLD3_9PHAE1.970e-1741.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1272contigP-littoralis_Contig1272:18098..22207 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LRF5
Preferred nameRIPK4
PFAMsAnk_2,Ank_3,Ank_4,Ank_5,Pkinase,Pkinase_Tyr
Model size1979
Max annot lvl2759|Eukaryota
KEGG koko:K02861,ko:K08846,ko:K08847,ko:K08848,ko:K16289
KEGG Pathwayko04064,ko04210,ko04217,ko04620,ko04621,ko04622,ko04623,ko04668,ko04722,ko05131,ko05152,ko05160,ko05169,map04064,map04210,map04217,map04620,map04621,map04622,map04623,map04668,map04722,map05131,map05152,map05160,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0002009,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009653,GO:0009888,GO:0009889,GO:0010468,GO:0010556,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032502,GO:0044093,GO:0044424,GO:0044464,GO:0048518,GO:0048729,GO:0048856,GO:0050789,GO:0050794,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051252,GO:0060255,GO:0060429,GO:0065007,GO:0065009,GO:0080090,GO:1903506,GO:2000112,GO:2001141
Exons4
Evalue4.2e-33
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
EC2.7.11.1
Descriptionprotein kinase activity
Cds size540
COG categoryKLT
BRITEko00000,ko00001,ko01000,ko01001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789566.0659513-UTR-P-littoralis_Contig1272:18097..195341680789566.0659513-UTR-P-littoralis_Contig1272:18097..19534Pylaiella littoralis U1_48UTRP-littoralis_Contig1272 18098..19534 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789566.0767639-CDS-P-littoralis_Contig1272:19534..196271680789566.0767639-CDS-P-littoralis_Contig1272:19534..19627Pylaiella littoralis U1_48CDSP-littoralis_Contig1272 19535..19627 -
1680789566.0855038-CDS-P-littoralis_Contig1272:19903..200741680789566.0855038-CDS-P-littoralis_Contig1272:19903..20074Pylaiella littoralis U1_48CDSP-littoralis_Contig1272 19904..20074 -
1680789566.094871-CDS-P-littoralis_Contig1272:21409..215801680789566.094871-CDS-P-littoralis_Contig1272:21409..21580Pylaiella littoralis U1_48CDSP-littoralis_Contig1272 21410..21580 -
1680789566.10566-CDS-P-littoralis_Contig1272:22102..222071680789566.10566-CDS-P-littoralis_Contig1272:22102..22207Pylaiella littoralis U1_48CDSP-littoralis_Contig1272 22103..22207 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1272.5.1prot_P-littoralis_Contig1272.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1272 19535..22207 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1272.5.1

>prot_P-littoralis_Contig1272.5.1 ID=prot_P-littoralis_Contig1272.5.1|Name=mRNA_P-littoralis_Contig1272.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=180bp
GGYTTGTYNGVASEGLEDFVALKLDSDGNVEWIWQDGSDEEDIIEACTLT
ADGNVVLAGFTNGEWLGSQPGTSAIAAVKLDVTDGSVVWDYQAGVTTFYV
VAWGAAGRSDGSVVLVGPTEGVWGDEQIGTTDFVAVALDEDGGELWRWQD
GAEFSYSAIRGVAALSDGSLVLVGSTTGD*
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mRNA from alignment at P-littoralis_Contig1272:18098..22207-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1272.5.1 ID=mRNA_P-littoralis_Contig1272.5.1|Name=mRNA_P-littoralis_Contig1272.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4110bp|location=Sequence derived from alignment at P-littoralis_Contig1272:18098..22207- (Pylaiella littoralis U1_48)
GGAGGATACACGACTGGCACGTACAACGGGGTCGCCTCCGAAGGACTTGA AGATTTCGTCGCGTTAAAACTAGACTCTGACGGGAATGTGGAATGGATCT GGCAGGTGAGGATAAATGGGTCCCCTACACCATGGGTTTATTCGGATGAA GGCTTGTCCTGACATGGAAGCCATGTTTCATGACTTTTCTGAAGGCAACG ATCACAGTCAAAGCTTCCACCACATTTTCACCAGCAGCAGCGTGTGCTCC TGTAGCTGTGTGCTGACAAAAAGCCGCGGCAACACTTGTGGTCATCTGCA TCATTCCAGTTGGTGGACGTTGGCAGCTCGTCAAGTCCATGGATGCCCGC TTTCGTATTAGTTAAACGAAGATGAGGTTTCAAAATACATGTCACAAAAT GGTGCACGTGTGGGCGTGGTTCGCTGCTTAGCGATTAGGGTCGAAGCCGA TTTGCGTAGTATTCGTGTCTCCTTTTTTTATATTTCAAAACGAATCGACT CTGAGGACCAGGAGAAACATTATCCTGCACCGGGTAGACAAGGTCGAGTC TAAGGGGTACTGAAGGAGCGCCAGATTAGTGTCTAAGTTTGTTTTCTCTT TTGTGGCGCTCATCTGGCATTGAGCAGGACGGGAGTGACGAAGAAGACAT CATCGAAGCATGCACTCTGACGGCTGACGGGAACGTGGTGTTAGCGGGAT TCACCAACGGAGAGTGGCTGGGATCGCAACCTGGAACTTCGGCGATAGCG GCGGTCAAGCTAGATGTCACGGACGGCAGTGTCGTCTGGGACTACCAGGT GACCATCTGTTTGCTTCCCAGTAGTACTCTTACCTTTCATGTGCTGGTCT GAAAAGCCCTTATGGTTCTCACAGTTTCCTGCCGAAATACGATACTGTAC TCAGACGAACAAATGACCTTGGTCCAAGCGGTTCAATACTCGCGTCACTT GCAGCTTGATGCGGATTGTCGTGTTAAAGCTCTGCGAGGTATTCTCGAAC GTTTCACGGCACCCATCTCCGAACACCCAGAGTACAATAAACCGGTACCG GATAACAATTAATCTAAATGAAAGGGGAGAGGATCCCTCGATCTCCCACC TTAGGCACACAAAATATTCCTTTCTATCTGCGGTCAAAAGAAAAAAACTG CTCTACTCTATGCAACAGGAGAGGAAGGTATGCTTTGTATTTTTTAAGAC CTTTGGGTTTTGGTGAGTAGCATATTTCCGTCGAATAATCCCGAACTGCA TATCAATGCGGTGGTCGAGTCTGGTAGCCGAGAACGCCCCGATCGATGAT TCTCCCGAAGCGAACTATCAATTCTTTTTGAACCACCCCCGATCACATTA GGTCCACAGGAACTCTGTCAGCGAATACTTGTTGTTTCGATAGGTGGGCA TCCTCCCGCAACAGCCACACCTTCCAGAAACAGGAATTGCTTAAACTATG CCAGGTGCGCAACACCAATGTCGCAAAAAGCGACACCGCCCATGCCTCAC TCCAGACACCTGGGATAGACACAACACCATCACTCCTGTGTGGACACGGC CCAGAGCTATCGTGAAAACTAGCGAGCCAATCTCAAGAAAGCCAGCCAAC CCACCCAATATACACGTACTGCTATGCGGAGGTCCGCACCTCACAGCTCT GATGTCACCCTCAGCACCGCCGAGAGGACGCCGAAAGTACACACAGCACG CCGCAAACAGCATTCGTCGCTATCATGAGATAAGGGGATCAAACAAACGA AGAACGACCTGATCAGCCACTGTACTTCTGATTATCTACGAGGTCTGGTT CTTCATTTCAAAACATTTCCGGCGGGGGCGTAGACTAAGAGCTCGTGACG CAGCCCGCTCGCAGCAGGGCGGCCCTGTCCAAGGCTGATATTTTTCTGGC TGACGATCTGGGCGGGCTGAACGAGCGTTTGCGTAGGTATTTCATTTCTA ACCCCGTCAGGGTTCCGCGTCACGAAAGGGCACCCACAACGGTATGGGGT TAGACAAATGCGTTCAGGGGAGAACACTGTGAGACGCACACTCGCATTTT ATCATATCGTCGGCCCTCAAATCCCTGTTAATATCTTGTTACCTATATAC AACTGCCCGGCGCGCTAACTTCATCTTGGATAGGCTGGAGTGACGACATT TTATGTGGTGGCATGGGGGGCTGCCGGTCGATCGGACGGGTCCGTCGTGT TGGTGGGACCCACAGAAGGAGTTTGGGGCGACGAGCAGATCGGGACCACA GATTTCGTGGCTGTGGCTCTAGACGAAGATGGTGGAGAGCTGTGGCGCTG GCAGGTCAGTCTGTGAATAAGTTGATATTCATGTTAGGCTCCAAACACGA GGCCTCAGAGGCTGGAGTTGATACCACTACACGATGCCAGGTACCCCCTG TATGCAGCAGGAGGTTGCTGAGATCCACTTTTTGTTCATTTTGTACCGCA CGATTCCTCTAAATTTCCATTTCCCACTTTGACTCTTCACTAAGTCGTGT GGCGAAGGATCCACAATTATATTGCCGCCGTGCAATCATAGTGTCAATCT TAACGCCAATAATGATGCTTCGGATGGCAGGACGGCGCTGAGTTTTCCTA CAGCGCAATACGTGGTGTGGCAGCCCTCTCGGATGGCTCTCTTGTACTCG TGGGGAGCACAACAGGAGACTAAAGTGGCACCGGAAATGAATATGCAGAA GATACGGACTTTGTGGTCGTCAAATTAACCGCAGGCGGGGTCTTGGAGTG GACATGGCAGGTGACTACTTACAGCAGAGTAGCGATCGAACTCTCTGCTA CCGCCACATTGGTCTTGCGAACGAGGAAATCTCTCTCACCCACTGTTCAT CGGCTGCATCGACTTACCGATGCTGCGTCATGCCGTCACTTGCTCTAGAT ATTATGATTCTGCTGGGGGGTGTCGGGGGCGAAAGGACATGGGTCAGTAG TGGCAGCATGCTTATGCACATGTGACGTAAAATGGTTTCAGTACTTACAT TATGTACCTCGCCGCGCGGTAAATGACACATCAAAAGGACGGGACACCGT ATGAGGATGACTTCAAAGACGTGGTGACAGGTATCGATGGCACATCGGTC ATCATAGGGGGCTATACCTACGGCAGTTGGGTGGAGACCAACCTGGATGC AGAAGGGGCTGATCAGGACATTGTTGGCATGTCCATGGATGGCGACGGCA CCTTGCTGTGGACGTATCAGGTAGTTGCCGCGGGTGGCGGGACACGGAGT TTATCACGCCCTTCGAACGGGTTCGCAACCCGACTTCTCTACCAGAGGGA TGGAATTGTTTACCATGGTGATCAAGATGAAATTGTTGCCAAACTTCTAC CCCGAGGAAAACAACGATCCAGACTTGACGCTTCCCTGTTGTACACCGAT CGAGAGATCAGTCATTTCAAAGGGTGGTAAATGGACGTCATTACAGCCCT TCAGTATTGGCTTGGGTGCATTTAGTGATGATCGCATACGACGACGTTTT GCTGTTGGCCGCCATATTGGGCCTGTGTATCTCGGGGGTCAGTTTTTTGT TCGTGCCACGAGACCGACTCATTCCTGAGATTCGTTATATGTTGGTCGTC AACGGTTCACCAGACCTCATGGGGCACTTATGTGCTGTAAAAAATCAGAA ACTTTAAATCCAGGAAGTAGAGGATAATTGGGTTATTGTTCCGGGGGTTG GGAAGCTCCAAAAGTTATGGAAAACCTAAACCTTGTTGAAAGACTTTCAG GCATCAAATACAGTATCGCCGGTCGCTGTGAGGACCATGACAGGGAGCCG CCGGTTGTGTGTCCTTCTATCTGTGCCTCTGTCGACCCCTGTAGGTTTGT TCGGAAGACCCCTCAGCGCAGTGATGAATGATAACATGTACTGTCCCGTT GATATTGGAGGTTTCTTGGCGGCCGTAACCGCCGTCTGGCCGCGCCAGGT ACTTGCGGTATACCTTTCTTTTGTTTTCCTCCCTTGTTGCTGTTGAAAGG CGGGGGTAGGCACGATGACTTGGAGAGAGCTCCATATTATATTTGTTCCA AGGCCCACGTGCTTCTCTGTGAATATCTGGGATGTGGTCTTTTTTTCCAC AACGAGTGGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig1272:18098..22207-

>mRNA_P-littoralis_Contig1272.5.1 ID=mRNA_P-littoralis_Contig1272.5.1|Name=mRNA_P-littoralis_Contig1272.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=540bp|location=Sequence derived from alignment at P-littoralis_Contig1272:18098..22207- (Pylaiella littoralis U1_48)
GGAGGATACACGACTGGCACGTACAACGGGGTCGCCTCCGAAGGACTTGA
AGATTTCGTCGCGTTAAAACTAGACTCTGACGGGAATGTGGAATGGATCT
GGCAGGACGGGAGTGACGAAGAAGACATCATCGAAGCATGCACTCTGACG
GCTGACGGGAACGTGGTGTTAGCGGGATTCACCAACGGAGAGTGGCTGGG
ATCGCAACCTGGAACTTCGGCGATAGCGGCGGTCAAGCTAGATGTCACGG
ACGGCAGTGTCGTCTGGGACTACCAGGCTGGAGTGACGACATTTTATGTG
GTGGCATGGGGGGCTGCCGGTCGATCGGACGGGTCCGTCGTGTTGGTGGG
ACCCACAGAAGGAGTTTGGGGCGACGAGCAGATCGGGACCACAGATTTCG
TGGCTGTGGCTCTAGACGAAGATGGTGGAGAGCTGTGGCGCTGGCAGGAC
GGCGCTGAGTTTTCCTACAGCGCAATACGTGGTGTGGCAGCCCTCTCGGA
TGGCTCTCTTGTACTCGTGGGGAGCACAACAGGAGACTAA
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