prot_P-littoralis_Contig127.84.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig127.84.2
Unique Nameprot_P-littoralis_Contig127.84.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length177
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig127.84.2 vs. uniprot
Match: D7FXV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXV5_ECTSI)

HSP 1 Score: 279 bits (713), Expect = 7.540e-94
Identity = 134/175 (76.57%), Postives = 154/175 (88.00%), Query Frame = 0 
Query:    1 MKTRYTPLVILIVASWVGLGQSWGGGRRAEDRAQVLAWEAFSADLSRGDCTMDSLSEQASITLPIGQVISKDEYRQACSSSMGDTTVGDTSVRGGKVVTIDRSNFSVEATVTTTAVSFKGGYQQEVSYPAAFFMSMDVKTNKLTEVRMYSQNIALLAARGYTMVPSSVYGPVIRP 175
            MKTR++ LVI IVASWVGL QSWGGGRRAED+   LAWEAFSAD+ RGDCTMDSLSEQAS+TLPIGQ ++KDEYR AC +SMGDTTVG+TS+  GK+V+IDR NFSVEA VT  A S K G+QQ+VSYPAAFFM++D++TNKL EVRMY+QNIALLAARGYTM+PSS YGPVIRP
Sbjct:    1 MKTRHSALVIFIVASWVGLAQSWGGGRRAEDKTHTLAWEAFSADMGRGDCTMDSLSEQASVTLPIGQTVTKDEYRLACENSMGDTTVGETSLHDGKLVSIDRVNFSVEAMVTAKATSLKTGFQQDVSYPAAFFMTIDLRTNKLAEVRMYAQNIALLAARGYTMIPSSSYGPVIRP 175
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig127.84.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXV5_ECTSI7.540e-9476.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig127contigP-littoralis_Contig127:370950..376864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig127.84.2mRNA_P-littoralis_Contig127.84.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig127 370897..377502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig127.84.2 ID=prot_P-littoralis_Contig127.84.2|Name=mRNA_P-littoralis_Contig127.84.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=177bp
MKTRYTPLVILIVASWVGLGQSWGGGRRAEDRAQVLAWEAFSADLSRGDC
TMDSLSEQASITLPIGQVISKDEYRQACSSSMGDTTVGDTSVRGGKVVTI
DRSNFSVEATVTTTAVSFKGGYQQEVSYPAAFFMSMDVKTNKLTEVRMYS
QNIALLAARGYTMVPSSVYGPVIRPA*
back to top