mRNA_P-littoralis_Contig127.75.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig127.75.1
Unique NamemRNA_P-littoralis_Contig127.75.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: D7FMQ6_ECTSI (Dihydroflavonol-4-reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ6_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 1.120e-145
Identity = 235/279 (84.23%), Postives = 248/279 (88.89%), Query Frame = 3
Query:  180 GVSTSMLAMSAG----VSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEAL-SSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL 1001
            G + S  +MSA     +S+GDTVVVVGASGGIGRLV QSLASTGKYKVKGLVRNLEKAKEAL SS G GLEIELEQG+ILDE SL  AMKGA+CVVACTGTTAFPSKRW+GGNTPDAVDNLAVGNMLRAAA GGSLKRFVLLSSVGVTRA+ FPFVILNAFGVLDAKAKGEAAV KAA+EGGF YSIVRPGQIKG+PFL YS  G A+SPDAPEKGSAKRMVSL+QGD+EAGDVNPSSVAEAFTQTVGQA A GK YTVINS GDAPSQ TWD LFA L
Sbjct:   57 GAAASRASMSAAAGGEISEGDTVVVVGASGGIGRLVTQSLASTGKYKVKGLVRNLEKAKEALLSSAGGGLEIELEQGDILDESSLVAAMKGAACVVACTGTTAFPSKRWNGGNTPDAVDNLAVGNMLRAAAGGGSLKRFVLLSSVGVTRADKFPFVILNAFGVLDAKAKGEAAVRKAAKEGGFGYSIVRPGQIKGDPFLAYSNSGAAVSPDAPEKGSAKRMVSLRQGDSEAGDVNPSSVAEAFTQTVGQAGAIGKSYTVINSLGDAPSQGTWDELFAKL 335          
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A836C875_9STRA (Dihydroflavonol-4-reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C875_9STRA)

HSP 1 Score: 204 bits (518), Expect = 4.610e-58
Identity = 125/277 (45.13%), Postives = 164/277 (59.21%), Query Frame = 3
Query:  186 STSMLAMSAGVSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAA--GGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQI--KGEPFLVYSKDG-PALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL 1001
            ST  +  S  V+KGD + V GA+GG+G  V + LA+TG YKV+ +VR+  +A    + V +   +EL + +I D   +  A++GA  VV CTGTTAFPSK W GGNTP  VD +A+ N+L  A    G  LKRFV LSS+GVTR  S PF ILNAFGVLDA A GE A+I  A+E GF Y+IVRPGQ+    E   V    G  AL     +  +  + V+L +GD   GD++    AE   Q + Q  A+ + +T I   G  P+Q  WD LFA L
Sbjct:    3 STEDVQQSRAVAKGDVIAVCGATGGVGAGVVKRLAATGDYKVRAIVRSTARAATRFADVPNSDALELVEADIRDPQGIAAALEGAHAVVCCTGTTAFPSKAWQGGNTPFEVDYVALKNVLTGATGQRGARLKRFVHLSSIGVTRRASLPFSILNAFGVLDALAMGEEALITEAQEAGFDYAIVRPGQLIDDDEEIDVNKPSGVQALLLGLVKPRAVLQAVALARGDAAVGDISRGGAAEVLCQALLQRGASNQAFTAIAQAGPPPTQAQWDALFAAL 279          
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A0G4EQC9_VITBC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EQC9_VITBC)

HSP 1 Score: 185 bits (470), Expect = 4.560e-51
Identity = 114/265 (43.02%), Postives = 157/265 (59.25%), Query Frame = 3
Query:  210 AGVSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAK------EALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKG--YTVINSPGDAPSQETW 980
            A +S GDT+VV GA+GG+G+LV Q LA  G++KV+ L R+ E+A       EAL++ G    +E+ +G++ D  SL  A+  AS VV CTGTTAFP+ +W GGNTP A+D      ++      G LK+F L +S+GV R    PF ILN FGVLDAK  GE AV+ A++E G+ Y IVRPG++ G P+       P ++     +G  K+ V +  GD  AGD    SVAEA  Q +   A  G    +++INS GD P+   W
Sbjct:    2 AALSDGDTIVVAGATGGVGQLVTQRLAQLGRFKVRALSRSPERASGPGGPLEALAAQG----VEVARGDVRDPSSLPSALADASAVVVCTGTTAFPTGKWKGGNTPKAIDEEGTRAVVEQLRKQGGLKKFALPTSIGVRRPGQLPFSILNLFGVLDAKKSGEEAVMSASKECGYDYVIVRPGRLIGGPYT-----NPDVATLLKIEGGDKQRVEIAPGDQMAGDCLRVSVAEAIVQALLCPALDGVSIDFSIINSKGDPPTDADW 257          
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A7R9UAD0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAD0_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.900e-44
Identity = 117/271 (43.17%), Postives = 158/271 (58.30%), Query Frame = 3
Query:  222 KGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAK----EALSSVGDGL--EIELEQGNILDEG-SLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLR---AAAAGG----SLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLF 992
            +GD V VVG +G +GRLV   LAS G + V+G+ R+LEK +    E L S  +     I L +G+   E   L +A+ GAS V+  TGTTAFP+K W+GGNTP+ VDNL V N++    +A A G    +LKRFVL+SSVGVTR   FPFVILN  GVL+AKA  E  +++AA   GF Y+IVRPGQ+ G P+      G  L  D   K +  + + ++ GD   GD   S+ AEA    +  A      + V+N  G + S+E +  LF
Sbjct:   74 QGDVVTVVGCTGNVGRLVTARLASMGSFSVRGVCRSLEKGEACFDERLRSKPEDSPGSIRLFEGDTRSENPGLREALTGASAVIVTTGTTAFPTKAWAGGNTPENVDNLGVKNVIDTWISANADGPGSAALKRFVLMSSVGVTRRAQFPFVILNLGGVLNAKAAAEEYLMEAAAGKGFDYTIVRPGQLFGGPYDNNYYLGTLLKLD---KDANSQNIVVETGDKLLGDTLRSTTAEALATALELAETRNTDFVVVNKNGPSTSEEEFRALF 341          
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A7S4LC74_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LC74_9EUGL)

HSP 1 Score: 166 bits (420), Expect = 4.920e-42
Identity = 100/273 (36.63%), Postives = 157/273 (57.51%), Query Frame = 3
Query:  183 VSTSMLAMSAGVSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFL---VYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQET-WDGL 989
            VST+  A +  ++ GDTVV+ GASGG+G+L+ Q LA   KY V+ +VR+LE+ ++       G +IEL +G   D  S+ + + GA+ V+  TGTTAFP+ +W  G+TP A+D   V N++ +     +LKRF+L++S+G+ R +  PF +LN+FGV+D K KGE AVI+ AE+ GF Y +VRPG++ G P+    + S     L+ D  +       V + +GD    D    S +E+  + +   +A     ++ N  G  P+    W  L
Sbjct:  188 VSTAGHARATPLAAGDTVVIYGASGGLGQLLVQKLALQKKYNVRAVVRDLERGRDLFK----GYDIELVEGATTDPPSVTRTIAGAAAVIVTTGTTAFPTMKWFQGSTPAAIDYEGVANVVNSTP--DTLKRFILVTSIGMERKDQMPFALLNSFGVIDEKRKGELAVIEGAEKKGFDYQLVRPGRLVGGPYTNPDIASLTNADLADDCQD-------VDIIKGDVGVNDAGRWSCSESIVEMLENTSAVNMALSICNKKGSPPADSAAWQAL 447          
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A7S2M4K4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M4K4_9STRA)

HSP 1 Score: 162 bits (410), Expect = 5.340e-42
Identity = 106/265 (40.00%), Postives = 151/265 (56.98%), Query Frame = 3
Query:  216 VSKGDTVVVVGASGGIGRLVAQSL-ASTGK-YKVKGLVRNLEKAKEALSSVG-DGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL 1001
            +   D VV+ GA+GG+G+LV + L A  GK Y++    R+  +AKE L +   D +E+ L   N   +  L  A++GA+ VV   GTTAFP+KRW GGN P A+D  AV  +  AA+   S++R VLL+SVGV+R N  PF+ILN FGVLDAK  GE AV  AA E GFSYSIVRPG++ G P+         L+     +G A+  V +  GD   GD    + AEA  Q +   +     ++++++   A + + W   F  +
Sbjct:   52 IKSNDKVVIFGATGGVGQLVTKKLSARDGKNYQLTIAARDAARAKETLDNDNIDVVELNLVGDNKATDAELQAAIEGATGVVVSVGTTAFPTKRWDGGNNPKAIDMEAVTRIANAASNVESVRRMVLLTSVGVSRTNQMPFLILNLFGVLDAKRAGEDAVKSAAGEAGFSYSIVRPGRLVGGPYTNLD-----LANLFKIEGGAENGVDVAGGDVMLGDCKRDACAEAVVQCLENESCVDLEFSLVSNEDTALTNDGWSSAFTSM 311          
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A1Z5KP62_FISSO (NAD(P)-bd_dom domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP62_FISSO)

HSP 1 Score: 161 bits (407), Expect = 1.360e-41
Identity = 108/267 (40.45%), Postives = 161/267 (60.30%), Query Frame = 3
Query:  195 MLAMSAGVSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGD-APSQETWDGLF 992
            +L +SA + +GDTVVVVG SGG+G+LV++ LA  G Y V+   RN     +   ++    +++L +G+   +  L +A++GA+ +V   GTTAFP+ +W GGNTP A+D++AV  +  AA+A  SLKR VL++S+GV R +  PF ILN FGVLDAK KGE AV KAA E    Y+I+RPG++ G PF         ++     KG A+  V++  GD   GD    + AEA  Q +  AA +   ++++++  + A S E W   F
Sbjct:   52 LLFLSA-IGEGDTVVVVGGSGGVGQLVSRKLAQAG-YFVRVTSRNNPSTTDTNPNL-TSTKLDLVKGS---DQELQQAIQGAAALVISVGTTAFPTLKWKGGNTPQAIDDIAVTRLAYAASALQSLKRIVLVTSIGVDRTDQMPFFILNLFGVLDAKKKGEEAVRKAANEN-IDYAIIRPGRLIGGPFTNLD-----VAKLLQLKGGAENGVTVAAGDVLLGDCKRDACAEAIVQCLTNAACSNVEFSIVSNENETAWSVEQWTSAF 306          
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A4D9D7C0_9STRA (NAD(P)-bd_dom domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7C0_9STRA)

HSP 1 Score: 157 bits (398), Expect = 8.050e-41
Identity = 102/261 (39.08%), Postives = 148/261 (56.70%), Query Frame = 3
Query:  228 DTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGG---SLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL 1001
            D V V+G++GG G+L+   L   G+Y+V+ + R+  K ++ L   G+  ++E  + +  D GSL   +    CV+  TGT+AFPS RW GGNTPDAVD   V N+L+A  +     ++K+ V LSSVGV R    P+ ILNAFGVLDAK   E  + + A   GF   IVRPG++ G P+   + D   L     E+G+ KR+V ++QGD+  GD    SVAE   + + +  A G+   ++N  G   S+  W  LF  L
Sbjct:   10 DRVCVIGSTGGCGQLITARLVDEGRYQVRAVGRSDAKLRKVLG--GESPKLEFAEADSRDIGSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRAVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMASTEGFDILIVRPGRLVGGPWT--NTDVSTLL--KVEEGARKRVV-VEQGDSLVGDAARVSVAELVVRALERPEAVGRALCLVNEEGPPFSEGQWTALFEGL 263          
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: B7GAK9_PHATC (Nucleoside-diphosphate-sugar epimerases-like protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAK9_PHATC)

HSP 1 Score: 156 bits (394), Expect = 9.510e-40
Identity = 102/285 (35.79%), Postives = 151/285 (52.98%), Query Frame = 3
Query:  147 VRCGVTIPRLTGVSTSMLAMSAGVSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL 1001
            VRC    PR    +     + A +  GD V+V+G +GG+G+LV Q LA+   Y V+  V + + A+ A     D + +            L  A++G + VV   GTTAFP+ +W GGNTP A+D  AV N+ ++A     LK+ VLL+SVGV R    PF+ILN FGVLDAK  GE AV+ AA   GF Y+I+RPG++ G P+       P ++     +G A+  V +Q GD+  GD    + AEA  Q +         +++ ++   A + E W+  F  +
Sbjct:   32 VRC--ESPRSVADAVRNTRLCAALQSGDGVLVIGGTGGVGQLVTQKLAAAA-YDVR--VASRDPARAAAVLANDNVRVVSLDLLSATPADLDAALQGTAAVVISVGTTAFPTMKWRGGNTPQAIDQEAVTNIAQSARTVPGLKKVVLLTSVGVDRTGEMPFLILNLFGVLDAKKAGEQAVVDAAVHSGFEYAIIRPGRLVGGPYT-----NPDVAKLLQVQGGAENGVDVQPGDSLLGDCKRDACAEAVVQCLINEECRNVDFSIASNDQPALTNEAWNQAFRSM 306          
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A7S2SSE5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSE5_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.480e-39
Identity = 111/266 (41.73%), Postives = 146/266 (54.89%), Query Frame = 3
Query:  228 DTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRA--AAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPF-------LVYSKDGPA---LSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAF-----TQTVGQAAAAGKGYTVINSPGDAPSQE 974
            D + VVGASG +GRL A  L   G  KV+ +VR+ E+A+  LS     +EI   Q +  D  SL  A+ G S +V CTGT+AFP+  W  GNTP  VD + V N+L      AG   KR VL+SS+GV R + FPF ILNA GVLDAKA+GEAA+ +A      S  IVRPGQ+ G P+        +   D PA    SPD P +    + V +  GDT  GD   S+VAE       ++ +GQ  +     +V+N  G   S+E
Sbjct:    1 DVIGVVGASGNVGRLAALRLTGKGAAKVRAIVRSPERARSFLSDAAPQMEI--VQADARDPESLRSALAGCSGLVVCTGTSAFPTLSWRNGNTPKQVDAIGVQNILSVWKEVAGVPTKRAVLMSSIGVERRSGFPFFILNAAGVLDAKAEGEAALREACSSWLGSGVIVRPGQLIGGPYDNRYYLGTIVELDRPASALFSPDDPPR----KKVDMATGDTLLGDTIRSTVAEVLVASLLSEDIGQGVS---DISVVNLEGPETSEE 257          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMQ6_ECTSI1.120e-14584.23Dihydroflavonol-4-reductase n=2 Tax=Ectocarpus Tax... [more]
A0A836C875_9STRA4.610e-5845.13Dihydroflavonol-4-reductase n=1 Tax=Tribonema minu... [more]
A0A0G4EQC9_VITBC4.560e-5143.02NAD(P)-bd_dom domain-containing protein n=2 Tax=Vi... [more]
A0A7R9UAD0_9STRA1.900e-4443.17Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S4LC74_9EUGL4.920e-4236.63Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2M4K4_9STRA5.340e-4240.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5KP62_FISSO1.360e-4140.45NAD(P)-bd_dom domain-containing protein n=1 Tax=Fi... [more]
A0A4D9D7C0_9STRA8.050e-4139.08NAD(P)-bd_dom domain-containing protein n=3 Tax=Mo... [more]
B7GAK9_PHATC9.510e-4035.79Nucleoside-diphosphate-sugar epimerases-like prote... [more]
A0A7S2SSE5_9STRA2.480e-3941.73Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig127contigP-littoralis_Contig127:328353..334562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMQ6
PFAMsNAD_binding_10
Model size1621
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue1.45e-150
EggNOG OGsCOG0702@1|root,KOG1203@2759|Eukaryota
Ec32 ortholog descriptionDihydroflavonol-4-reductase
Ec32 orthologEc-23_001220.1
Descriptiondivinyl chlorophyllide a 8-vinyl-reductase activity
Cds size870
COG categoryGM
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig127.75.1prot_P-littoralis_Contig127.75.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig127 328970..334428 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789563.4593027-UTR-P-littoralis_Contig127:328352..3289691680789563.4593027-UTR-P-littoralis_Contig127:328352..328969Pylaiella littoralis U1_48UTRP-littoralis_Contig127 328353..328969 -
1680789563.5491023-UTR-P-littoralis_Contig127:334428..3345621680789563.5491023-UTR-P-littoralis_Contig127:334428..334562Pylaiella littoralis U1_48UTRP-littoralis_Contig127 334429..334562 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789563.4727921-CDS-P-littoralis_Contig127:328969..3290741680789563.4727921-CDS-P-littoralis_Contig127:328969..329074Pylaiella littoralis U1_48CDSP-littoralis_Contig127 328970..329074 -
1680789563.4852033-CDS-P-littoralis_Contig127:329742..3299501680789563.4852033-CDS-P-littoralis_Contig127:329742..329950Pylaiella littoralis U1_48CDSP-littoralis_Contig127 329743..329950 -
1680789563.5043976-CDS-P-littoralis_Contig127:331903..3320351680789563.5043976-CDS-P-littoralis_Contig127:331903..332035Pylaiella littoralis U1_48CDSP-littoralis_Contig127 331904..332035 -
1680789563.5164108-CDS-P-littoralis_Contig127:332762..3328871680789563.5164108-CDS-P-littoralis_Contig127:332762..332887Pylaiella littoralis U1_48CDSP-littoralis_Contig127 332763..332887 -
1680789563.5286927-CDS-P-littoralis_Contig127:333632..3337831680789563.5286927-CDS-P-littoralis_Contig127:333632..333783Pylaiella littoralis U1_48CDSP-littoralis_Contig127 333633..333783 -
1680789563.5391045-CDS-P-littoralis_Contig127:334279..3344281680789563.5391045-CDS-P-littoralis_Contig127:334279..334428Pylaiella littoralis U1_48CDSP-littoralis_Contig127 334280..334428 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig127.75.1

>prot_P-littoralis_Contig127.75.1 ID=prot_P-littoralis_Contig127.75.1|Name=mRNA_P-littoralis_Contig127.75.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=290bp
MGAGVRCGVTIPRLTGVSTSMLAMSAGVSKGDTVVVVGASGGIGRLVAQS
LASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMK
GASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFV
LLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRP
GQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVA
EAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL*
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mRNA from alignment at P-littoralis_Contig127:328353..334562-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig127.75.1 ID=mRNA_P-littoralis_Contig127.75.1|Name=mRNA_P-littoralis_Contig127.75.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6210bp|location=Sequence derived from alignment at P-littoralis_Contig127:328353..334562- (Pylaiella littoralis U1_48)
AGGTATACCCCCGGCAGCAAACAACGGCTGCTGCAACTGCTGCTGCAACG GGCGATGTCGAGCGTCTTGGCGGGTACGCGCGGTCGAGAGCTGCAGCAGA ACGCAGCAGCAGCAGCAGCAGCAACAGCAGATGGATGGGAGCCGGAGTCA GATGCGGCGTTACGATTCCGAGACTGACGGGAGTGTCGACGTCGATGTTG GCGATGTCGGCAGGCGTTTCGAAGGGGGATACAGTCGTCGTTGTTGGCGC TTCGGGGGGTATCGGCCGCTTGGTGGCTCAAAGGTAGGCACCGCCGTACC ATGGGCTATTCGTGCTACTACTGCTGTATCATGTATTTTCGTCATTCGAA AGCGGGCGTGCTGTCAGGTTTGTTCGGACAACGCACCCCTATTCTCAGGT CTCGTAAATGTACACGGTGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGT TGCCTCTCTCCCCGAATTCGCACCAGTAGAGTCATGCCTTGCTCGCGCTG CCCCGAGCTTGACTTTCCGTTACACTTCGAAAGGATTATACAATGTTGTA CGTGAGAAACGCAGTACACTACTGGTGATTCAGATTTGTATCGCTACTCG CATGAACTTGATTTTGCGGCAGTGATGGTGATAGATGCCGACGCCAAACG TTGGCCTTGTTTTGCGGCTCGGCATGTTGCCCTCGCGAATAGGCTCGGCA TATGACGTCTTCCTCCCGGCCGCCGTTCCCTGTCCTTTTCTGGCGTCGCA ATGGATTGACCGTTGCACGAAACGGACAGCCTGGCGTCCACCGGAAAGTA CAAGGTTAAGGGCCTCGTGCGGAACCTCGAAAAGGCTAAGGAGGCGTTGT CGTCGGTCGGGGACGGCCTGGAGATAGAGCTCGAGCAGGGCAACATCTTG GACGAGGGGAGCCTTGGCAAGGCGATGAAGGTGTGAAGATAGGTATGTAG AACGAACGGCGCTATTCCGTTTCGGGAGGGGACGGGCACACGACTAACGG TCAAGTTAGGAAAAGCAAGGGAAACACGACCCCCCGCCCGCTCTCTCCCT TGTGTGCTTCAATGGTCAAATGATCGCTGTAAGGCAAGCAACCAAATGAG TACGACCCCCCCTATTATCTCTTTTCGCCCGTGGGATTTGACCACGACTT TAACAAAAATTGCACCCGGCGAAGCGAACGCGATGAAAACGGAGGATTCT GAACAGACGGCACTCCAACTGTCCAACCACCGATCGCCACGAGTACGGCC TTTTTTACAGTGGAAAGTTCCCATAGCCCAACAAACAAGCAGAGGATTTC GTCTGGGGATGAATGCTAAGAGGTCTGGAGGGTCTCCCGAGGGCGGCTTT GAGGCCAGATACAGGAATTCTAGCAGCAGTGGGTGGCGGGCCGCTGTGAC ATACAACCGTCAAAGCTGGGGGGCGAACAAAACTGATGTGGCTCGGGCCA ACCCGCAACGGGTGAACGGTTACCGTATTGACAGCTAGTCAGAGATTGCA CCGAACACCCTTTGAACTTTGAACTGACTATCGTAGGTGAACGCCCGCCA GGCCATTGGACTCGAAGCAGAGATGATCAGGCTCCCGATCTTGTTTTTTC TGCACGTGTGTGTTTGTCTGTGTGCGTGTGCGTTCCGTGCACGTTTTCGT GGTATGGTATGCATGTCTAATGTAGGGTGCATCGTGCGTGGTGGCGTGCA CCGGGACCACGGCTTTTCCTTCGAAACGGTGGAGCGGGGGAAACACTCCC GATGCCGTGGACAACCTGGCGGTGGGCAACATGCTTCGGGCAGCGGCAGC GTAAGTATTATTGCTGTCGTCGCGATTAAAGTGCTTGCTGGATTGGGTTG CCGTTTTGACCTGCGGTGGGGGGGGGGGGAGGCAATGGAACTCGAGGAAG TTGGTAGGGGATAGTGTAGACAGACCATGGTATTGACAACCTGCAGGGTT TAGTAAAGCGACCATGCTCAAACACTGCTTTTTCGCGCTTTGTTGTGGGC TGCGGGGGGCTCGCCACCGGCTATCATCGGAGACTGCTTATCCGCTACCC GCAGTCTAGGAAAATGGCGGGAAAATTCCAACGCACTATCGATGCAACAA TCAAATGCTCGTTCCCTATGTAGCTTGGATCTATTACATCTTGGAAATTC AAAAATCATAGACAAGACCCATTTTTTGTTCAGCACGGTATCACCAGCTA GAAACTATCGTTGTGCTGATAAATCGAGCCCCCATTTGCTTCTAAGTGCC GTTTAGTTTGAAGTACTATTTTTGGTGCTTGGCATAATATTTTATTTGAA CGCGAACCACCCCGCTCACTTCATCAACTCCCTGCTCGCCCCTGGGCGGT CGGTATGTTAATTGCTGTTTGCAGCGACGGTAGCTTGAAGCGGTGCATCC CGCCGTCATGGGTGGCAAGCGAAATCTGTTGCGCCTTCTCATTATCGAGA TAAGGTGTGTTTTCGTCATAACCCACGGCCGCACTCCCTCCCTGCTCATT GCGCTTGTTTTTTTTTGTTGATTGCAGCGGAGGTAGCTTGAAGCGATTCG TTCTGTTGTCGTCGGTGGGAGTGACGAGAGCGAACAGTTTCCCGTTTGTG ATCCTCAATGCTTTTGGAGTTCTCGACGCTAAGGCGAAGGGGGAGGCCGC TGTGATAAAGTGAGACACAGCACAACATCCGAGGATCAATTGAGCGTTTT TCAACATATTTTTTCATGTATGATATTTGTCGTAGCGGGTGGGAACCCTC ACTTGGCGTGGTCGATATACGGGGCCGGGGGTCGAAAAAGGGTGTGTGAA GTCTATTGTGTCTCTTCCCTCCGTCGTTTGACTGTTGGCCGCACATTCCG GTCGAGAGGGAGCACCCCTCCTACTCCCAGCGTAAAGTCACCACCAAAAA TTCGATTCTCTGAATATTTTTGCTATGTCTGATGCACAGCGCGCGCATGC CTCTGTGAAGAAGACGAAAACAGTACTTACCGATTTCGGCCCTGGAACAA GAGTACAAGTACACCAGCTGCACAAACCGCGGACATGCGCAAGAAAACGA AGGAGTGTCGGTTTCGGCCCTCGAACAACACTACAAGTATCATAACGGCT GCACAAACTGCGAATATCCGGGTAGATTTTTACTCGCCGCTCCGGCTGTC CGAACGCTCTTGCCTCTTGCCTGCAGAAGAAAACACGAACTTCGTTGTTT TCGCCGCACGAATGTTATTTTTATGTCTTGTTTTGCATCAGATTATATGT TTCTCCGGAAGAGTGGGGCCAGTTTTTGTTCGTGTGACGTTTTCTTCTGA TTTAGTTTCTTCGCTTGATGTTAACGGCGTTTATACGGTCTACGGGGTCC CTTAGGTATGAACGTAGAAATGTTTTTTGTTTTTGGGATTGACGAGCAAT ATTTAATTTTTATTGCCCGTCAATCCCGAAAACAATTCTACGTTCATACC TAGGGGACAATGTTGGAAGAAGAGGATGTTACCAGAGAGAACAGTTATCA AATGGGGGTTCAATTTTCGTTTGTTTGTAAGGTTTAGGCTTTTTCTAAAT GAGGTTTTTCTTCTTATCATAGTCGAGTAATTACTACCATATCGCACTTT TTTGAGGTCGTGAATTTTGGTATTTTTTATCTGAAAATTAGCAGAGGAAG ATGGTGATTATTTTTGACATTTTTACACGGGGGTATTGTAGAGGTTTTCG TGCGGTCAAAACTTGGTCAGGACTGGCGAGACAGTTCAGGTAAGGCTTTG TGTGAGGAATGTTTTTCGATGGGTTGACGCACTATGTCGTAGTAGATGGA TTTGTACACCCTGCAACAAGGCACATGCTGGAATCGACTTCCCTACTTTG GTGAAATGTTGTTGTTGTTCCGTGGGTATTTCCTCCAGGATAGTTTCTTG TTTTGGCGACTCGAGAAGTTGTTGAGGAATAAAGGTTGTGAAATCGCACA TGTGTTTTGAAGCATACGGGTTTCCGGAGATTTTCGAAGATGGCTGTAAA AAGGCGACGATTTTCAGAGATTTGGTACGTACTTGGGCTGACACGCCGTT GAGAATGGTGGCGTGTGTTGGCCTATAGAGGGGAGAGGAGCATTTTTCTT GGGAGGTTTTTCCCTTTTGTTTGTTTCAAAATGGGAGATTGATGCAAGAT ACGCGCCGTGACTGAATATGTAAGAGATTTGGCGAATGTAGATGTATTGA ATGAGAGGTGTTGAGCATCTGTACTCGGGTTCAAAGATTGGAGGCTTTGG GAGTGAGGGTGAATGTTGCCGCTTACCCGGTGATTTGTGCAGAGTTGCTG AGACCGTATCTCGTGCCGAGCAGGGAGGTGGTTTGATGCACACGGCATTT ATACGATCTGCGGGGTCTCTTCGGCATAGACCTTTGAAGTGGGTGATTGG CGGAGCCCCTTTGCTCTTCGCCTTTCTGCCACCCTTTCCAACGATATTAC ACATGGTTTGAGTCAGTGAACATACCCTACCTCAAGACGGTGTCCGCGTG ATCAACCGTCACCATGTGACAGGCCAGAGCCAAGCAGTCAGGCACATCTT ATTATTTTTTCCCTTTTGCTCCTGTTCTCACCGCTCACCCACCCGCACGC ACGCATGGTCAGAGCTGCAGAGGAAGGGGGATTCAGCTACTCCATCGTGC GTCCCGGGCAGATCAAGGGAGAACCCTTCTTGGTCTACTCGAAGGACGGC CCCGCTCTCTCGCCGGACGCACCGGAAAAGGGATCCGCGAAGCGAATGGT GTCGTTGCAACAAGGCGACACGGAAGCCGGGGACGTGAATCCTAGCTCGG TGGCGGAGGCGTTTACGCAGGTGATAGATGGACTTGGACGAAAAAGAACA ACCTAAGTATTTCTGGATGGCTAGCAGTCTCTCTCTCTCGCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTTCCCCTTTACCTCTGCATATTTCGGC GAGGCGGCACAGGGGCGGCGAGTGAAGTTCATCTATCCTAAATACTTCTT CGTACTTCGTACTTGTACAGCAGCAGCAACTTTCTGAACACATGAAATCT ATCCGCCCACCCTCCCGACAAGTGCTGCCTGCGCTGCAGCGGAAGAACGT CCGATGCAACTCTTGCATGCGTTCGTGTTGTCCCACGACTTGATCACGAC TTACAGTAGTCACGACACGCCATACGAATTACTTAAGGTCGTTCACGGCT TAGTCTTCGTCGGATCAGAACAGAGGATGGAGGCGCTGGAGAAAGGTCGC AACGGTTTCTAATGTCAAAAGACAGGGATAGCAATGCGGTATTGGTCTAG ACGACTGAGCCCGACCCAGCCCGCTTACATGTGTTTGTGTGTGCAACGGT TTCTAATATCAAAAGACAAGGATAGCAATGCGGTATTGGTCTAGACGACT GAGCCCGACCCAACCCGCTTACATGTGTTTGTGTGTCTGCGCCGCGTCGC GCCTTTCGCCTTGCTACATGCATACCCGGCGGTTACAGACTGTGGGGCAG GCTGCAGCGGCTGGTAAGGGTTACACGGTAATCAACTCGCCCGGAGACGC TCCAAGCCAAGAGACCTGGGATGGGCTGTTCGCCGACCTCTGATTGATTT GTTGGTTTGCTATTTTTAAGCGGAAAATGCTGTGCAGGGCACCCGTCGCA GTGGAAAGGCTTGTTTTATTGTGGCTGAGGCGGGTTGCGTCTCTCAGCTT GGAAAGTGAGTTTTGTCATCTACACTCGCTTCGGTACTAAACACGCCATG TTTTTTTTGTGTTCTTGAACATTTGAGCACCCGTTTCTTCTGCATGAGTT TGCGAAGAAGAGCGTCAGCGCCGGAAAGGTTAGCGTTGGAAAAAACTTGT CGATGTAGTAGCTCTCCGAAACGGTGTAGTCTGGTACTGGCTCATAACCT CTTGGGTGCGGAGTATTCGGGCTCTAAAAATTGGTCCGAAGAAGTGATAC CCATGAGGAAACACGGCAGTAAGCACGAAACCGTCTACCGTGGTACATCG TGAAATACTGCAGACACCTGAGATGCGCCAATGCCCTCAGTACGAGTCAC TCTCCCGTCTCTCTGCGTTGATGCAGACCTGAGGATTTATCAGTAAAGAA CGCTCTTGAATCGAAAGTTTATAACTTTACCTGCTTTGTTGTCTCTCCAA AAAAAAATTGTTGTCGTTTTTGTTGTTATTGTCTTCACACTGGAAACCAT TCGGATCTCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig127:328353..334562-

>mRNA_P-littoralis_Contig127.75.1 ID=mRNA_P-littoralis_Contig127.75.1|Name=mRNA_P-littoralis_Contig127.75.1|organism=Pylaiella littoralis U1_48|type=CDS|length=870bp|location=Sequence derived from alignment at P-littoralis_Contig127:328353..334562- (Pylaiella littoralis U1_48)
ATGGGAGCCGGAGTCAGATGCGGCGTTACGATTCCGAGACTGACGGGAGT
GTCGACGTCGATGTTGGCGATGTCGGCAGGCGTTTCGAAGGGGGATACAG
TCGTCGTTGTTGGCGCTTCGGGGGGTATCGGCCGCTTGGTGGCTCAAAGC
CTGGCGTCCACCGGAAAGTACAAGGTTAAGGGCCTCGTGCGGAACCTCGA
AAAGGCTAAGGAGGCGTTGTCGTCGGTCGGGGACGGCCTGGAGATAGAGC
TCGAGCAGGGCAACATCTTGGACGAGGGGAGCCTTGGCAAGGCGATGAAG
GGTGCATCGTGCGTGGTGGCGTGCACCGGGACCACGGCTTTTCCTTCGAA
ACGGTGGAGCGGGGGAAACACTCCCGATGCCGTGGACAACCTGGCGGTGG
GCAACATGCTTCGGGCAGCGGCAGCCGGAGGTAGCTTGAAGCGATTCGTT
CTGTTGTCGTCGGTGGGAGTGACGAGAGCGAACAGTTTCCCGTTTGTGAT
CCTCAATGCTTTTGGAGTTCTCGACGCTAAGGCGAAGGGGGAGGCCGCTG
TGATAAAAGCTGCAGAGGAAGGGGGATTCAGCTACTCCATCGTGCGTCCC
GGGCAGATCAAGGGAGAACCCTTCTTGGTCTACTCGAAGGACGGCCCCGC
TCTCTCGCCGGACGCACCGGAAAAGGGATCCGCGAAGCGAATGGTGTCGT
TGCAACAAGGCGACACGGAAGCCGGGGACGTGAATCCTAGCTCGGTGGCG
GAGGCGTTTACGCAGACTGTGGGGCAGGCTGCAGCGGCTGGTAAGGGTTA
CACGGTAATCAACTCGCCCGGAGACGCTCCAAGCCAAGAGACCTGGGATG
GGCTGTTCGCCGACCTCTGA
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