mRNA_P-littoralis_Contig127.75.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: D7FMQ6_ECTSI (Dihydroflavonol-4-reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ6_ECTSI) HSP 1 Score: 431 bits (1108), Expect = 1.120e-145 Identity = 235/279 (84.23%), Postives = 248/279 (88.89%), Query Frame = 3
Query: 180 GVSTSMLAMSAG----VSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEAL-SSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL 1001
G + S +MSA +S+GDTVVVVGASGGIGRLV QSLASTGKYKVKGLVRNLEKAKEAL SS G GLEIELEQG+ILDE SL AMKGA+CVVACTGTTAFPSKRW+GGNTPDAVDNLAVGNMLRAAA GGSLKRFVLLSSVGVTRA+ FPFVILNAFGVLDAKAKGEAAV KAA+EGGF YSIVRPGQIKG+PFL YS G A+SPDAPEKGSAKRMVSL+QGD+EAGDVNPSSVAEAFTQTVGQA A GK YTVINS GDAPSQ TWD LFA L
Sbjct: 57 GAAASRASMSAAAGGEISEGDTVVVVGASGGIGRLVTQSLASTGKYKVKGLVRNLEKAKEALLSSAGGGLEIELEQGDILDESSLVAAMKGAACVVACTGTTAFPSKRWNGGNTPDAVDNLAVGNMLRAAAGGGSLKRFVLLSSVGVTRADKFPFVILNAFGVLDAKAKGEAAVRKAAKEGGFGYSIVRPGQIKGDPFLAYSNSGAAVSPDAPEKGSAKRMVSLRQGDSEAGDVNPSSVAEAFTQTVGQAGAIGKSYTVINSLGDAPSQGTWDELFAKL 335
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A836C875_9STRA (Dihydroflavonol-4-reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C875_9STRA) HSP 1 Score: 204 bits (518), Expect = 4.610e-58 Identity = 125/277 (45.13%), Postives = 164/277 (59.21%), Query Frame = 3
Query: 186 STSMLAMSAGVSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAA--GGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQI--KGEPFLVYSKDG-PALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL 1001
ST + S V+KGD + V GA+GG+G V + LA+TG YKV+ +VR+ +A + V + +EL + +I D + A++GA VV CTGTTAFPSK W GGNTP VD +A+ N+L A G LKRFV LSS+GVTR S PF ILNAFGVLDA A GE A+I A+E GF Y+IVRPGQ+ E V G AL + + + V+L +GD GD++ AE Q + Q A+ + +T I G P+Q WD LFA L
Sbjct: 3 STEDVQQSRAVAKGDVIAVCGATGGVGAGVVKRLAATGDYKVRAIVRSTARAATRFADVPNSDALELVEADIRDPQGIAAALEGAHAVVCCTGTTAFPSKAWQGGNTPFEVDYVALKNVLTGATGQRGARLKRFVHLSSIGVTRRASLPFSILNAFGVLDALAMGEEALITEAQEAGFDYAIVRPGQLIDDDEEIDVNKPSGVQALLLGLVKPRAVLQAVALARGDAAVGDISRGGAAEVLCQALLQRGASNQAFTAIAQAGPPPTQAQWDALFAAL 279
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A0G4EQC9_VITBC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EQC9_VITBC) HSP 1 Score: 185 bits (470), Expect = 4.560e-51 Identity = 114/265 (43.02%), Postives = 157/265 (59.25%), Query Frame = 3
Query: 210 AGVSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAK------EALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKG--YTVINSPGDAPSQETW 980
A +S GDT+VV GA+GG+G+LV Q LA G++KV+ L R+ E+A EAL++ G +E+ +G++ D SL A+ AS VV CTGTTAFP+ +W GGNTP A+D ++ G LK+F L +S+GV R PF ILN FGVLDAK GE AV+ A++E G+ Y IVRPG++ G P+ P ++ +G K+ V + GD AGD SVAEA Q + A G +++INS GD P+ W
Sbjct: 2 AALSDGDTIVVAGATGGVGQLVTQRLAQLGRFKVRALSRSPERASGPGGPLEALAAQG----VEVARGDVRDPSSLPSALADASAVVVCTGTTAFPTGKWKGGNTPKAIDEEGTRAVVEQLRKQGGLKKFALPTSIGVRRPGQLPFSILNLFGVLDAKKSGEEAVMSASKECGYDYVIVRPGRLIGGPYT-----NPDVATLLKIEGGDKQRVEIAPGDQMAGDCLRVSVAEAIVQALLCPALDGVSIDFSIINSKGDPPTDADW 257
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A7R9UAD0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAD0_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.900e-44 Identity = 117/271 (43.17%), Postives = 158/271 (58.30%), Query Frame = 3
Query: 222 KGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAK----EALSSVGDGL--EIELEQGNILDEG-SLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLR---AAAAGG----SLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLF 992
+GD V VVG +G +GRLV LAS G + V+G+ R+LEK + E L S + I L +G+ E L +A+ GAS V+ TGTTAFP+K W+GGNTP+ VDNL V N++ +A A G +LKRFVL+SSVGVTR FPFVILN GVL+AKA E +++AA GF Y+IVRPGQ+ G P+ G L D K + + + ++ GD GD S+ AEA + A + V+N G + S+E + LF
Sbjct: 74 QGDVVTVVGCTGNVGRLVTARLASMGSFSVRGVCRSLEKGEACFDERLRSKPEDSPGSIRLFEGDTRSENPGLREALTGASAVIVTTGTTAFPTKAWAGGNTPENVDNLGVKNVIDTWISANADGPGSAALKRFVLMSSVGVTRRAQFPFVILNLGGVLNAKAAAEEYLMEAAAGKGFDYTIVRPGQLFGGPYDNNYYLGTLLKLD---KDANSQNIVVETGDKLLGDTLRSTTAEALATALELAETRNTDFVVVNKNGPSTSEEEFRALF 341
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A7S4LC74_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LC74_9EUGL) HSP 1 Score: 166 bits (420), Expect = 4.920e-42 Identity = 100/273 (36.63%), Postives = 157/273 (57.51%), Query Frame = 3
Query: 183 VSTSMLAMSAGVSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFL---VYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQET-WDGL 989
VST+ A + ++ GDTVV+ GASGG+G+L+ Q LA KY V+ +VR+LE+ ++ G +IEL +G D S+ + + GA+ V+ TGTTAFP+ +W G+TP A+D V N++ + +LKRF+L++S+G+ R + PF +LN+FGV+D K KGE AVI+ AE+ GF Y +VRPG++ G P+ + S L+ D + V + +GD D S +E+ + + +A ++ N G P+ W L
Sbjct: 188 VSTAGHARATPLAAGDTVVIYGASGGLGQLLVQKLALQKKYNVRAVVRDLERGRDLFK----GYDIELVEGATTDPPSVTRTIAGAAAVIVTTGTTAFPTMKWFQGSTPAAIDYEGVANVVNSTP--DTLKRFILVTSIGMERKDQMPFALLNSFGVIDEKRKGELAVIEGAEKKGFDYQLVRPGRLVGGPYTNPDIASLTNADLADDCQD-------VDIIKGDVGVNDAGRWSCSESIVEMLENTSAVNMALSICNKKGSPPADSAAWQAL 447
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A7S2M4K4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M4K4_9STRA) HSP 1 Score: 162 bits (410), Expect = 5.340e-42 Identity = 106/265 (40.00%), Postives = 151/265 (56.98%), Query Frame = 3
Query: 216 VSKGDTVVVVGASGGIGRLVAQSL-ASTGK-YKVKGLVRNLEKAKEALSSVG-DGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL 1001
+ D VV+ GA+GG+G+LV + L A GK Y++ R+ +AKE L + D +E+ L N + L A++GA+ VV GTTAFP+KRW GGN P A+D AV + AA+ S++R VLL+SVGV+R N PF+ILN FGVLDAK GE AV AA E GFSYSIVRPG++ G P+ L+ +G A+ V + GD GD + AEA Q + + ++++++ A + + W F +
Sbjct: 52 IKSNDKVVIFGATGGVGQLVTKKLSARDGKNYQLTIAARDAARAKETLDNDNIDVVELNLVGDNKATDAELQAAIEGATGVVVSVGTTAFPTKRWDGGNNPKAIDMEAVTRIANAASNVESVRRMVLLTSVGVSRTNQMPFLILNLFGVLDAKRAGEDAVKSAAGEAGFSYSIVRPGRLVGGPYTNLD-----LANLFKIEGGAENGVDVAGGDVMLGDCKRDACAEAVVQCLENESCVDLEFSLVSNEDTALTNDGWSSAFTSM 311
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A1Z5KP62_FISSO (NAD(P)-bd_dom domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP62_FISSO) HSP 1 Score: 161 bits (407), Expect = 1.360e-41 Identity = 108/267 (40.45%), Postives = 161/267 (60.30%), Query Frame = 3
Query: 195 MLAMSAGVSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGD-APSQETWDGLF 992
+L +SA + +GDTVVVVG SGG+G+LV++ LA G Y V+ RN + ++ +++L +G+ + L +A++GA+ +V GTTAFP+ +W GGNTP A+D++AV + AA+A SLKR VL++S+GV R + PF ILN FGVLDAK KGE AV KAA E Y+I+RPG++ G PF ++ KG A+ V++ GD GD + AEA Q + AA + ++++++ + A S E W F
Sbjct: 52 LLFLSA-IGEGDTVVVVGGSGGVGQLVSRKLAQAG-YFVRVTSRNNPSTTDTNPNL-TSTKLDLVKGS---DQELQQAIQGAAALVISVGTTAFPTLKWKGGNTPQAIDDIAVTRLAYAASALQSLKRIVLVTSIGVDRTDQMPFFILNLFGVLDAKKKGEEAVRKAANEN-IDYAIIRPGRLIGGPFTNLD-----VAKLLQLKGGAENGVTVAAGDVLLGDCKRDACAEAIVQCLTNAACSNVEFSIVSNENETAWSVEQWTSAF 306
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A4D9D7C0_9STRA (NAD(P)-bd_dom domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7C0_9STRA) HSP 1 Score: 157 bits (398), Expect = 8.050e-41 Identity = 102/261 (39.08%), Postives = 148/261 (56.70%), Query Frame = 3
Query: 228 DTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGG---SLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL 1001
D V V+G++GG G+L+ L G+Y+V+ + R+ K ++ L G+ ++E + + D GSL + CV+ TGT+AFPS RW GGNTPDAVD V N+L+A + ++K+ V LSSVGV R P+ ILNAFGVLDAK E + + A GF IVRPG++ G P+ + D L E+G+ KR+V ++QGD+ GD SVAE + + + A G+ ++N G S+ W LF L
Sbjct: 10 DRVCVIGSTGGCGQLITARLVDEGRYQVRAVGRSDAKLRKVLG--GESPKLEFAEADSRDIGSLYGPLSDVDCVIIATGTSAFPSPRWRGGNTPDAVDRKGVQNILKAITSKPRKRAVKKVVFLSSVGVLRTKQLPYSILNAFGVLDAKRDSEDLLRQMASTEGFDILIVRPGRLVGGPWT--NTDVSTLL--KVEEGARKRVV-VEQGDSLVGDAARVSVAELVVRALERPEAVGRALCLVNEEGPPFSEGQWTALFEGL 263
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: B7GAK9_PHATC (Nucleoside-diphosphate-sugar epimerases-like protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAK9_PHATC) HSP 1 Score: 156 bits (394), Expect = 9.510e-40 Identity = 102/285 (35.79%), Postives = 151/285 (52.98%), Query Frame = 3
Query: 147 VRCGVTIPRLTGVSTSMLAMSAGVSKGDTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRAAAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPFLVYSKDGPALSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAFTQTVGQAAAAGKGYTVINSPGDAPSQETWDGLFADL 1001
VRC PR + + A + GD V+V+G +GG+G+LV Q LA+ Y V+ V + + A+ A D + + L A++G + VV GTTAFP+ +W GGNTP A+D AV N+ ++A LK+ VLL+SVGV R PF+ILN FGVLDAK GE AV+ AA GF Y+I+RPG++ G P+ P ++ +G A+ V +Q GD+ GD + AEA Q + +++ ++ A + E W+ F +
Sbjct: 32 VRC--ESPRSVADAVRNTRLCAALQSGDGVLVIGGTGGVGQLVTQKLAAAA-YDVR--VASRDPARAAAVLANDNVRVVSLDLLSATPADLDAALQGTAAVVISVGTTAFPTMKWRGGNTPQAIDQEAVTNIAQSARTVPGLKKVVLLTSVGVDRTGEMPFLILNLFGVLDAKKAGEQAVVDAAVHSGFEYAIIRPGRLVGGPYT-----NPDVAKLLQVQGGAENGVDVQPGDSLLGDCKRDACAEAVVQCLINEECRNVDFSIASNDQPALTNEAWNQAFRSM 306
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Match: A0A7S2SSE5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSE5_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.480e-39 Identity = 111/266 (41.73%), Postives = 146/266 (54.89%), Query Frame = 3
Query: 228 DTVVVVGASGGIGRLVAQSLASTGKYKVKGLVRNLEKAKEALSSVGDGLEIELEQGNILDEGSLGKAMKGASCVVACTGTTAFPSKRWSGGNTPDAVDNLAVGNMLRA--AAAGGSLKRFVLLSSVGVTRANSFPFVILNAFGVLDAKAKGEAAVIKAAEEGGFSYSIVRPGQIKGEPF-------LVYSKDGPA---LSPDAPEKGSAKRMVSLQQGDTEAGDVNPSSVAEAF-----TQTVGQAAAAGKGYTVINSPGDAPSQE 974
D + VVGASG +GRL A L G KV+ +VR+ E+A+ LS +EI Q + D SL A+ G S +V CTGT+AFP+ W GNTP VD + V N+L AG KR VL+SS+GV R + FPF ILNA GVLDAKA+GEAA+ +A S IVRPGQ+ G P+ + D PA SPD P + + V + GDT GD S+VAE ++ +GQ + +V+N G S+E
Sbjct: 1 DVIGVVGASGNVGRLAALRLTGKGAAKVRAIVRSPERARSFLSDAAPQMEI--VQADARDPESLRSALAGCSGLVVCTGTSAFPTLSWRNGNTPKQVDAIGVQNILSVWKEVAGVPTKRAVLMSSIGVERRSGFPFFILNAAGVLDAKAEGEAALREACSSWLGSGVIVRPGQLIGGPYDNRYYLGTIVELDRPASALFSPDDPPR----KKVDMATGDTLLGDTIRSTVAEVLVASLLSEDIGQGVS---DISVVNLEGPETSEE 257 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig127.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig127.75.1 >prot_P-littoralis_Contig127.75.1 ID=prot_P-littoralis_Contig127.75.1|Name=mRNA_P-littoralis_Contig127.75.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=290bp MGAGVRCGVTIPRLTGVSTSMLAMSAGVSKGDTVVVVGASGGIGRLVAQSback to top mRNA from alignment at P-littoralis_Contig127:328353..334562- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig127.75.1 ID=mRNA_P-littoralis_Contig127.75.1|Name=mRNA_P-littoralis_Contig127.75.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6210bp|location=Sequence derived from alignment at P-littoralis_Contig127:328353..334562- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig127:328353..334562- >mRNA_P-littoralis_Contig127.75.1 ID=mRNA_P-littoralis_Contig127.75.1|Name=mRNA_P-littoralis_Contig127.75.1|organism=Pylaiella littoralis U1_48|type=CDS|length=870bp|location=Sequence derived from alignment at P-littoralis_Contig127:328353..334562- (Pylaiella littoralis U1_48)back to top |