mRNA_P-littoralis_Contig126.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI) HSP 1 Score: 146 bits (369), Expect = 1.780e-41 Identity = 87/132 (65.91%), Postives = 96/132 (72.73%), Query Frame = 1
Query: 22 MPSTLSKLYHAAARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASAIGSSRVVRDLLRQGASVS 417
MPSTLSKLY AAA GSVERTVAVLSQGSV+IDGGYGD G+TPLM ASTMGYLRVVRVLLRLG RVSVADNDGATALHLSIVN H +V + + TPL VA+A G + + L+ G S
Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNK-HLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGGCSS 131
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI) HSP 1 Score: 142 bits (359), Expect = 5.930e-40 Identity = 84/116 (72.41%), Postives = 88/116 (75.86%), Query Frame = 1
Query: 22 MPSTLSKLYHAAARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASAIG 369
MPSTLSKLY AAA GSVERTVAVLSQGSVDIDGGYGD G+TPLM ASTMGYLRVVRVLLR G RVSVADNDGATALHLSIV H +V R + TPL VA+A G
Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIV-IKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKG 115
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.020e-39 Identity = 94/160 (58.75%), Postives = 106/160 (66.25%), Query Frame = 1
Query: 22 MPSTLSKLYHAAARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASAIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEA 501
MPSTLSKLYHA A GSVERTVAVLSQGSVDIDGGYGD G+TPLM A TMGYLRVVRVLLRLG RVSVADNDGATALHLSIVN H +V + + TPL VA+A G + + L+ GA+V T L+ S L + L+ A
Sbjct: 1 MPSTLSKLYHAPASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNK-HLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGANVDSEQEGRATPLYISARQGRLEDVRILVGA 159
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI) HSP 1 Score: 142 bits (357), Expect = 1.830e-39 Identity = 73/89 (82.02%), Postives = 78/89 (87.64%), Query Frame = 1
Query: 256 SIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASAIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEAR 522
S ++ GS++ ATT IDRGCG+TNQTPLMVAS IGSSRVVRDLLRQGASVSVADSDG TALHHSVYH HLAVSKDLIEAGADLEAR
Sbjct: 3 STLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEAR 91
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE) HSP 1 Score: 142 bits (357), Expect = 5.290e-37 Identity = 73/89 (82.02%), Postives = 78/89 (87.64%), Query Frame = 1
Query: 256 SIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASAIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEAR 522
S ++ GSVER ATTDIDR CG+TN TPLMVAS IGSSRVV+DLLRQGASVSVADSDGYTALHHSVYH+HLAVS LIEAGADLEAR
Sbjct: 3 STLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEAR 91
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 144 bits (363), Expect = 9.370e-37 Identity = 73/82 (89.02%), Postives = 77/82 (93.90%), Query Frame = 1
Query: 277 GSVERVTATTDIDRGCGETNQTPLMVASAIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEAR 522
GSVER ATTDIDR CG+TNQTPLMVAS IGSSRVVRDLLRQGASVS+ADSDGY ALHH+VYHKHLAVSKDLIEAGADL+AR
Sbjct: 400 GSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDAR 481
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE) HSP 1 Score: 120 bits (302), Expect = 5.400e-29 Identity = 61/77 (79.22%), Postives = 66/77 (85.71%), Query Frame = 1
Query: 256 SIVNTWHGSVERVTATTDIDRGCGETNQTPLMVASAIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSK 486
S ++ GS + ATTDIDR CG+TNQTPLMVAS IG SRVVRDLLRQGASVSVADSDGYTALHH+VYHKHLAVSK
Sbjct: 9 STLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSK 85
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 1.460e-12 Identity = 40/57 (70.18%), Postives = 46/57 (80.70%), Query Frame = 1
Query: 352 VASAIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEAR 522
VAS +G RVVR LLR GA VS AD+DG TALH S+ +KHLAVSK L++AGADLEAR
Sbjct: 37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEAR 93
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 3.900e-12 Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 277 GSVERVT-----ATTDIDRGCGETNQTPLMVASAIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLEAR 522
GSVER T+IDR C E T LM A+ G R+VR LLR GA VSV+ DG+TALH ++ ++LAV+K LI+AGA++EA+
Sbjct: 28 GSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAK 114
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Match: A0A484DQ20_PERFV (Palmitoyltransferase n=11 Tax=Perciformes TaxID=8111 RepID=A0A484DQ20_PERFV) HSP 1 Score: 64.7 bits (156), Expect = 5.300e-9 Identity = 40/130 (30.77%), Postives = 68/130 (52.31%), Query Frame = 1
Query: 130 DGGQTPLMVASTMGYLRVVRVLLRLGPRVSVADNDGATALHLSIVNTWHGSVER-VTATTDIDRGCGETNQTPLMVASAIGSSRVVRDLLRQGASVSVADSDGYTALHHSVYHKHLAVSKDLIEAGADLE 516
D G ++ A+ G L + L+ G V D + T LH + +N+ V+ ++ +D+ G+ N TPL A G +V L+R GA S+AD +GY ALH ++ +H+A++ L+ G ++E
Sbjct: 65 DSGSWDIVKATQFGILERCKELVEAGYDVRQPDKENVTLLHWAAINSRSELVKYYISKGAIVDQLGGDLNSTPLHWAIRQGHLPMVIQLMRYGADPSIADGEGYRALHLAILFQHMAIAAYLMAKGQEVE 194 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig126.4.1 >prot_P-littoralis_Contig126.4.1 ID=prot_P-littoralis_Contig126.4.1|Name=mRNA_P-littoralis_Contig126.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=167bp MPSTLSKLYHAAARGSVERTVAVLSQGSVDIDGGYGDGGQTPLMVASTMGback to top mRNA from alignment at P-littoralis_Contig126:3432..4675+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig126.4.1 ID=mRNA_P-littoralis_Contig126.4.1|Name=mRNA_P-littoralis_Contig126.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1244bp|location=Sequence derived from alignment at P-littoralis_Contig126:3432..4675+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig126:3432..4675+ >mRNA_P-littoralis_Contig126.4.1 ID=mRNA_P-littoralis_Contig126.4.1|Name=mRNA_P-littoralis_Contig126.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=501bp|location=Sequence derived from alignment at P-littoralis_Contig126:3432..4675+ (Pylaiella littoralis U1_48)back to top |