prot_P-littoralis_Contig126.61.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig126.61.2
Unique Nameprot_P-littoralis_Contig126.61.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length490
Homology
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BLAST of mRNA_P-littoralis_Contig126.61.2 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 3.760e-6
Identity = 23/40 (57.50%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:   46 NRQRRCGISSCGKTPSYGVAGSRRREFCLQHAKEGMINLN 85
            +R  +CG  +C K P+YGVAGS++REFC QHA++GM+N+N
Sbjct:   59 SRMSQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVN 98
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BLAST of mRNA_P-littoralis_Contig126.61.2 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 6.350e-6
Identity = 22/35 (62.86%), Postives = 31/35 (88.57%), Query Frame = 0 
Query:   51 CGISSCGKTPSYGVAGSRRREFCLQHAKEGMINLN 85
            CG ++C K P+YGVAGS++REFC QHA++GM+N+N
Sbjct:    4 CGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVN 38
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig126.61.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT00_9PHAE3.760e-657.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI73_ECTSI6.350e-662.86EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 304..367
e-value: 3.5E-15
score: 58.0
coord: 145..188
e-value: 3.2E-5
score: 26.1
coord: 189..249
e-value: 2.1E-7
score: 33.1
coord: 66..126
e-value: 1.5E-8
score: 36.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 419..433
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 444..465
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 91..124
e-value: 9.1E-6
score: 26.2
coord: 169..200
e-value: 2.0E-7
score: 31.4
coord: 248..280
e-value: 2.3E-7
score: 31.3
coord: 364..397
e-value: 6.3E-5
score: 23.5
coord: 130..163
e-value: 1.1E-5
score: 25.9
coord: 326..360
e-value: 1.0E-8
score: 35.6
coord: 208..241
e-value: 3.3E-8
score: 33.9
coord: 288..321
e-value: 3.3E-7
score: 30.7
coord: 51..84
e-value: 1.6E-6
score: 28.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig126contigP-littoralis_Contig126:224126..225595 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig126.61.2mRNA_P-littoralis_Contig126.61.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig126 223953..226945 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig126.61.2 ID=prot_P-littoralis_Contig126.61.2|Name=mRNA_P-littoralis_Contig126.61.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=490bp
MEGIVDKRKAQMCSHPCRTTRAKSGTIGTRRRVFCSQDMVDIRDNNRQRR
CGISSCGKTPSYGVAGSRRREFCLQHAKEGMINLNKKSQRCNHPGCDRGA
SYGAPGSRKREFCSQHAKEVMINIIDSKKCAHPDCGKAPTFGVAGSRKRE
FCSQHAKKGMISLSNNKSCDHPGCGKRPSYGAAGSRKLIFCSQHAEKGMV
GLNKSRRCGHPGCTTRAHFGVINSRTREFCSQHATTGMVNVNNDSQRCRD
PGCSTRASFGLNAGGRKREFCSQHAKEGMVVITKRQTCSHPDCRLGPSYG
VVGSRKREFCSQHAKEGMINLASKKCSHPSCSTEPSYGAAGSRKREFCSQ
HAKEGMVNLVSKKCGHSRCSKLSSFGAAGSRKREFCSQHAEEGTVSLLKK
KSRTCGEGPSSSGRGGRDKNGGIDARLADAGKNRKTHGASPALVEKAARE
EWRQKKGKQAHSNVKPEAIENEAMLRMIHPRRREKRRQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys