prot_P-littoralis_Contig1250.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1250.7.1
Unique Nameprot_P-littoralis_Contig1250.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length256
Homology
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BLAST of mRNA_P-littoralis_Contig1250.7.1 vs. uniprot
Match: D7G8Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z9_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 1.450e-13
Identity = 91/238 (38.24%), Postives = 108/238 (45.38%), Query Frame = 0 
Query:    1 MAEDKPMTVKERMAALARASSGGDSASTP-PKAVSTSAGPSVAERLAKMRAGPGRGDSVLGGSPTSANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADKIAALSGSGNSKSSALPSSPSAGPXXXXXXXXXXXXXXXXXXXXXXXXXNVSDAKGGDSPRVSSGLAARMEAMKLSSSST------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMGKAIPIPMPGGE 231
            MAE+KPMTVKERMAALARAS    +A  P P+A   + GPSVAERLAKMRAGP   D+  G +P                                         AD+IA+LSGSG+ K S LP SPS  P                           + A+   + ++S GLAAR+ AM+ S+          XXXXXXXXXXX                    MGKA PIPMPGGE
Sbjct:    1 MAEEKPMTVKERMAALARASGQSSAAPAPVPRASGAATGPSVAERLAKMRAGPA--DAPTGDAPRLVRTLTPHPGAPTVVTSMPGGAGDSSKSGGSSSV------ADRIASLSGSGSGKPSILPPSPSGRPAGSSVSPAAGKTSQHGEGEVS------APAEAPAASKLSPGLAARLNAMRSSTDYVPEGEEGEXXXXXXXXXXXLATSGSSSSFSKVSPGLAARMGKAFPIPMPGGE 224
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1250.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8Z9_ECTSI1.450e-1338.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1250contigP-littoralis_Contig1250:32027..33844 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1250.7.1mRNA_P-littoralis_Contig1250.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1250 31986..34074 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1250.7.1 ID=prot_P-littoralis_Contig1250.7.1|Name=mRNA_P-littoralis_Contig1250.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=256bp
MAEDKPMTVKERMAALARASSGGDSASTPPKAVSTSAGPSVAERLAKMRA
GPGRGDSVLGGSPTSANKPGLVRTFTPPTSAPTVVTRSPGGGRGPSKSGG
SSSIADKIAALSGSGNSKSSALPSSPSAGPPASSTPPAAGKVASAGGGSN
DSGGGNVSDAKGGDSPRVSSGLAARMEAMKLSSSSTSSNGGSSEKNGTAV
EYASSKSGSKISPGLAAHMGKAIPIPMPGGEPRGGKDGLVCCVFHSSLRV
LSRVL*
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