prot_P-littoralis_Contig125.79.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig125.79.3
Unique Nameprot_P-littoralis_Contig125.79.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length708
Homology
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: D8LFT0_ECTSI (TFIIH subunit (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT0_ECTSI)

HSP 1 Score: 775 bits (2000), Expect = 1.220e-272
Identity = 503/714 (70.45%), Postives = 544/714 (76.19%), Query Frame = 0
Query:    1 MAMPGPSLGVGEEVLITVYAVHKKCPGTVWFTTRRALWRAADGKAAVQRVEVPWAAVMSFQCSPASEARAMMRLLRVAEGQPPIIFRFTETPGDTPREVLERAQAAVRKALKGGAEAGNSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKKMKWKTRGGLMGSASGGQSLRHSRDRDSMPGGRMRDVHDARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTGAGGGR-PALVDSAESATDLPELRIHQEVSREKLEIANKKRYHGGSNSKLG---GGASNGASARASSQAGPSSWPQSRR--LIGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEADKGIGDAFRLQGYEDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGAVAKLARLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQKLEESKARSGGGG 708
            M++PGPSLG GEEV++T +AVHKK PGTVWFT+RRALW+AADGKAAVQRVEV WAAV SFQCSPASEARAMMRLLRV EGQPPIIFRFTETPG TPREVLERAQAAVRKALKG A AG S                                  ALKKMKWKTRGGL+G+ASGGQSLRH   RDSMPGGRMR+VHDAR+RAALLAGDEVLTAQYREMVDG VVTEEEFWESRRRTLAE+DAK AS+HTGTPSEMPSDLVAE TSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEM+EKEFWTKYIQSAYFNRDRG     XXXXXXXXXXXXX                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     GRLE+GSVDPMVDLTSQWGDHHAREVDDSDP EE +EAANKRKEV+GKFNRHARLVMQP           R PALVDSA SATD+PELR+ +EV++EKL+IA+K RY GG  +      GG      +  +   G  S PQS R  ++  VTLAEAKAQLGPGFSILG  RP V+ AV +P QA+SAL+ECT+EA +G+GDAF LQG                    HFYASLDRP+SD GA AKL RLETRM+SKYKEL +ER+ LPRNADGNRLSAVIKPLLD LDHAF KLEESK+R GG G
Sbjct:    1 MSVPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRVEVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRSKTGVAEGGTNGTGKGKAGKYGGSSSKD-------ALKKMKWKTRGGLLGTASGGQSLRH---RDSMPGGRMRNVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGXXXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLESGSVDPMVDLTSQWGDHHAREVDDSDPTEELSEAANKRKEVVGKFNRHARLVMQPXXXXXXXXXXXRRPALVDSAASATDMPELRLREEVAQEKLDIAHKNRYRGGGGTNRADSNGGXXXXXXSSGALSVGSLSRPQSPRGMVVETVTLAEAKAQLGPGFSILGE-RPRVSGAVASPGQAMSALKECTREASRGVGDAFHLQG--------------------HFYASLDRPKSDAGAAAKLDRLETRMNSKYKELTEERRRLPRNADGNRLSAVIKPLLDSLDHAFLKLEESKSRKGGVG 669          
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A6H5JXC6_9PHAE (BSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC6_9PHAE)

HSP 1 Score: 651 bits (1679), Expect = 1.570e-224
Identity = 440/653 (67.38%), Postives = 473/653 (72.43%), Query Frame = 0
Query:   71 MMRLLRVAEGQPPIIFRFTETPGDTPREVLERAQAAVRKALKGGAEAGNSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKKMKWKTRGGLMGSASGGQSLRHSRDRDSMPGGRMRDVHDARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTG-AGGGRPALVDSAESATDLPELRIHQEVSREKLEIANKKRYHGGSNSKLGGGASNGASAR----------ASSQAGPSSWPQSRR--LIGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEADKGIGDAFRLQGY-EDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGAVAKLARLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQKLEESKARSGGGG 708
            MMRLLRV EGQPPIIFRFTETPG TPREVLERAQAAVRKALKG A AG                                    ALKKMKWKTRGGL+G+ASGGQSLRHS     MPGGRMRDVHDAR+RAALLAGDEVLTAQYREMVDG VVTEEEFWESRRRTLAE+DAK AS+HTGTPSEMPSDLVAE TSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEM+EKEFWTKYIQSAYFNRDRG     XXXXXXXXXXXXX                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          G  GG     G            G   +R VDDSDP EE +EAANKRKEV+GKFNRHARLVMQP          G RPALVDSA SATD+PELR+ +EV+R+KL+IA+K RY GG       G +NGA +            +  AG  S PQS R  L+  VTLAEAKAQLGPGFSILG  RP V+ AV +P QA+SAL+ECT+EA +G+GDAF LQGY EDFIG MHRHFQIVGELLRHFYA+LDRP+SD GA AKL RLETRM+SKYKEL +ER+ LPRNADGNRLSAVIKPLLDCLDHAF KLEESK+R GG G
Sbjct:    1 MMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRIRTGVAEGGTNGAGKGKAGKDGGSSKN--------ALKKMKWKTRGGLLGTASGGQSLRHS-----MPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRQARERKRGPYGGPDFAVG------------GSPRSRGVDDSDPTEELSEAANKRKEVVGKFNRHARLVMQPXXXXXXXXVTGRRPALVDSAASATDMPELRLREEVARDKLDIAHKNRYRGG-------GGTNGADSXXXXXXXXXXXGAVSAGSLSRPQSPRGMLVETVTLAEAKAQLGPGFSILGE-RPRVSGAVTSPGQAMSALKECTREASRGVGDAFHLQGYPEDFIGSMHRHFQIVGELLRHFYATLDRPKSDAGAAAKLDRLETRMNSKYKELTEERRILPRNADGNRLSAVIKPLLDCLDHAFLKLEESKSRKGGVG 620          
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A835YZ40_9STRA (BSD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ40_9STRA)

HSP 1 Score: 235 bits (600), Expect = 5.060e-63
Identity = 269/691 (38.93%), Postives = 350/691 (50.65%), Query Frame = 0
Query:   54 WAAVMSFQCSPASEARAMMRLLRVAEGQPPIIFRFTETPGDTPREVLERAQAAVRKALKGGAEAGNSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKKMKWKTRGGLMGSASGGQS--LRHSRDRDSMP----GGRMRDVHD---------------ARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTGAGGGRPALVDSAESATDLPELRIHQEVSREKLEIANKKRYHGGSNSKLGGGASNGASA---------------RASSQAG-------PSSWPQSRRLIGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEA-DKGIG-DAFRLQGY-EDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGA---VAKLARLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQ 695
            W+ V     SPA+ A+AM+++   +    P++ +  ++   T  ++L  A++ + K L+  + AG+S  XXXXXXXXXXXXXXXX                   K K     G  G+  G QS    H R R + P    GGR  D                  A+RRAALLA D VL AQY ++V+GGV+++ EFW  RR  L  + A A ++  G  S + +D V          F+L  R IH IF MYP V +AY+A VP E++EKEFW KY QS Y+ RDRG                  A +G    ++ AG      DDMF RFAA   XXXXXXXXXXXXXXXXXXXXXXXXX           G EG        VDP VDL +Q+ D+H+R VDD  P EE+  AA+ +  VI + NRHA LVM+P  GGG     G P   D   +ATDLPEL        + L +AN  RY          GA  GA+                R S +A        P +   +       T   A A   P  ++     P +ARA+  P +AL  L+ CTKEA   G G  A   + + ++F+  MHRHFQ++GELLRHFYA +        +     +L RL T+M SKY EL   RQGLPR+A G++LS +IKPLLD LD AF+
Sbjct:    3 WSLVKDHMVSPATSAKAMIKVNPTSSAVDPMVIQVLDSGLATAADILATARSTILKVLR--SYAGSSXXXXXXXXXXXXXXXXXXG------------------KAKSLNGDGGEGAPRGAQSWGAGHKRQRTAGPLSGAGGRALDAAAVQPPAXXXXXXAADVAQRRAALLARDAVLRAQYADVVEGGVLSDAEFWAGRRGMLEGEAAAARARRQGARSALGAD-VRPAVEGAKQVFRLTPRDIHQIFLMYPAVERAYKAKVPVELSEKEFWVKYFQSQYYTRDRGGA----------------AKAGGA--TISAG------DDMFSRFAAEYEXXXXXXXXXXXXXXXXXXXXXXXXXRGNSAQQRLS-GTEG--------VDPTVDLAAQFSDYHSRPVDDRGP-EERAGAADAQA-VIERLNRHAALVMRPRAGGG-----GAPH--DDPAAATDLPELHAPAPPPVQPLHLANASRY---------AGAQRGAAXXXXXXXXXXPVVRRKRVSLEATCIKRARPPHTHTHTSLQNNTATHCSAAAPRVPPQAVQ-LREPNLARALPPPARALDVLQACTKEAAGAGAGGSAATAKSFPQEFVTQMHRHFQVIGELLRHFYAGIGGXXXXXXSDIVQKQLHRLVTKMGSKYDELKALRQGLPRDAQGSQLSTLIKPLLDSLDDAFE 620          
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A2P4XBN0_9STRA (General transcription factor IIH subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XBN0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.770e-21
Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 0
Query:  196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + TG  S + +DL A+      +K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR +G
Sbjct:  123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNEGGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 246          
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A421FK41_9STRA (BSD domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FK41_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.300e-20
Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 0
Query:  196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + TG  S + +DL A+  + G + K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR +G
Sbjct:  102 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 226          
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A7S4DB33_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB33_HETAK)

HSP 1 Score: 104 bits (259), Expect = 1.640e-20
Identity = 89/296 (30.07%), Postives = 128/296 (43.24%), Query Frame = 0
Query:  225 EEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTGAGGGRPALVDSAE---SATDLPELRIHQEVSREKLEIANKKRYHG 517
            E +FW +R++ +A++ A   ++ TG PS + +    E  ++   KF L AR I  IF MYP V + Y+A VP EM+EKEFW KY QS +F RD G                  A + +++ S        GQDDMF RF A                                             +L+   VDP +DLT+   D+H    D   P  +      K   VI KFNRHA+LV+ PP    +     +    D A+     T+L ELR  +  + + L + NK++Y G
Sbjct:    1 EADFWAARQKQMADEQASVNAQTTGIPSTL-NLFQTEHITSRHKKFVLTARMIRHIFLMYPAVERCYKAKVPEEMSEKEFWVKYFQSQFFLRDSG------------------AETPDEKNSH-------GQDDMFTRFEAEEIENEKKKQSRKSAAPHSNGNNAKKQ------------------KLDV-EVDPSIDLTATENDYHPPSTDKLFPTGDPNSKGAK---VIDKFNRHAKLVLDPPS---SDISNKQRKHYDKAKIFGEGTELLELRKEEPPAYDPLNLKNKEQYFG 245          
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A662X0X0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0X0_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.380e-20
Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 0
Query:  196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + TG  S + +DL  +  + G + K+ LNA  IH IF  YP V+ AYQA VP +MTE EFW  + +S YF+RDR +G
Sbjct:  150 EIKQRAALLAANPTLKRQHTEMVNDGLISEEDFWASRRHLIAAEASKR--QKTGKTSAILTDLAGDNDTGGNVVKYNLNAEVIHQIFIQYPAVYMAYQAQVPDKMTETEFWGAFFKSKYFHRDRKAG 274          
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A0P1APW3_PLAHL (General transcription factor iih n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APW3_PLAHL)

HSP 1 Score: 106 bits (264), Expect = 2.740e-20
Identity = 58/127 (45.67%), Postives = 82/127 (64.57%), Query Frame = 0
Query:  196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + T   S + +DL A   S G + K+ LNA  IH IFT YP V+ AYQ  VP +MTE EFW  + +S YF+RDR +G
Sbjct:  124 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTAKTSAILTDLAANNDSGGNVVKYNLNAEVIHQIFTQYPAVYMAYQEQVPDKMTETEFWGAFFKSKYFHRDRKAG 248          
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A3F2RJ52_9STRA (BSD domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJ52_9STRA)

HSP 1 Score: 107 bits (266), Expect = 3.100e-20
Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 0
Query:  196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + TG  S + +DL A+  + G + K+ LNA  IH IF  YP V+ AYQ  VP +MTE EFW  + +S YF+RDR +G
Sbjct:  123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 247          
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A0X7YIL8_GLOUL (Putative general transcription factor IIH subunit (Fragment) n=19 Tax=Globisporangium TaxID=1448052 RepID=A0A0X7YIL8_GLOUL)

HSP 1 Score: 103 bits (258), Expect = 3.260e-20
Identity = 57/127 (44.88%), Postives = 82/127 (64.57%), Query Frame = 0
Query:  196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
            + ++RAALLA +  L  Q+ EMV+ G+++EE+FW SRR  +A + +K   + TG  S + +DL  +  + G + K+ LNA  IH IF  YP V  AYQA VP +MTE EFW  + +S YF+RDR +G
Sbjct:   37 EIKQRAALLAANPTLKRQHTEMVNEGLISEEDFWASRRHLIANEASKR--QKTGKTSAILTDLSGDNDTGGNVVKYNLNAEVIHQIFIQYPAVHLAYQAQVPDKMTETEFWGAFFKSKYFHRDRKAG 161          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFT0_ECTSI1.220e-27270.45TFIIH subunit (Partial) (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JXC6_9PHAE1.570e-22467.38BSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YZ40_9STRA5.060e-6338.93BSD domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A2P4XBN0_9STRA1.770e-2144.44General transcription factor IIH subunit (Fragment... [more]
A0A421FK41_9STRA1.300e-2044.88BSD domain-containing protein n=2 Tax=Phytophthora... [more]
A0A7S4DB33_HETAK1.640e-2030.07Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A662X0X0_9STRA2.380e-2044.88Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A0P1APW3_PLAHL2.740e-2045.67General transcription factor iih n=1 Tax=Plasmopar... [more]
A0A3F2RJ52_9STRA3.100e-2044.88BSD domain-containing protein n=1 Tax=Phytophthora... [more]
A0A0X7YIL8_GLOUL3.260e-2044.88Putative general transcription factor IIH subunit ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005607BSD domainSMARTSM00751wurzfinal6coord: 264..316
e-value: 3.1E-7
score: 40.1
IPR005607BSD domainPFAMPF03909BSDcoord: 269..319
e-value: 1.8E-9
score: 37.4
IPR005607BSD domainPROSITEPS50858BSDcoord: 264..316
score: 10.978927
NoneNo IPR availableGENE3D6.10.140.1200coord: 195..233
e-value: 2.0E-5
score: 26.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..452
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 427..452
NoneNo IPR availablePANTHERPTHR12856:SF0GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 1coord: 13..702
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 9..113
e-value: 1.3E-5
score: 27.0
IPR013876TFIIH p62 subunit, N-terminalPFAMPF08567PH_TFIIHcoord: 22..105
e-value: 3.6E-12
score: 46.5
IPR027079TFIIH subunit Tfb1/GTF2H1PANTHERPTHR12856TRANSCRIPTION INITIATION FACTOR IIH-RELATEDcoord: 13..702
IPR035925BSD domain superfamilySUPERFAMILY140383BSD domain-likecoord: 194..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig125contigP-littoralis_Contig125:313899..323151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig125.79.3mRNA_P-littoralis_Contig125.79.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig125 313899..323296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig125.79.3 ID=prot_P-littoralis_Contig125.79.3|Name=mRNA_P-littoralis_Contig125.79.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=708bp
MAMPGPSLGVGEEVLITVYAVHKKCPGTVWFTTRRALWRAADGKAAVQRV
EVPWAAVMSFQCSPASEARAMMRLLRVAEGQPPIIFRFTETPGDTPREVL
ERAQAAVRKALKGGAEAGNSSVGGGAGAAEGAGVGGSSKGAAKGKGGKDG
AKGGALKKMKWKTRGGLMGSASGGQSLRHSRDRDSMPGGRMRDVHDARRR
AALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGT
PSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMT
EKEFWTKYIQSAYFNRDRGSGSGSSGGGGANSGSTSSAISGNKRKSLEAG
GGEGGQDDMFLRFAAQEAEREKKEKEEGGGAAGAKRARAAAAAAAAAGAG
GAAAGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANK
RKEVIGKFNRHARLVMQPPDGGGTGAGGGRPALVDSAESATDLPELRIHQ
EVSREKLEIANKKRYHGGSNSKLGGGASNGASARASSQAGPSSWPQSRRL
IGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEADK
GIGDAFRLQGYEDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGAVAKLA
RLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQKLEES
KARSGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005607BSD_dom
IPR011993PH-like_dom_sf
IPR013876TFIIH_BTF_p62_N
IPR027079Tfb1/GTF2H1
IPR035925BSD_dom_sf