prot_P-littoralis_Contig125.79.3 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: D8LFT0_ECTSI (TFIIH subunit (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT0_ECTSI) HSP 1 Score: 775 bits (2000), Expect = 1.220e-272 Identity = 503/714 (70.45%), Postives = 544/714 (76.19%), Query Frame = 0
Query: 1 MAMPGPSLGVGEEVLITVYAVHKKCPGTVWFTTRRALWRAADGKAAVQRVEVPWAAVMSFQCSPASEARAMMRLLRVAEGQPPIIFRFTETPGDTPREVLERAQAAVRKALKGGAEAGNSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKKMKWKTRGGLMGSASGGQSLRHSRDRDSMPGGRMRDVHDARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTGAGGGR-PALVDSAESATDLPELRIHQEVSREKLEIANKKRYHGGSNSKLG---GGASNGASARASSQAGPSSWPQSRR--LIGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEADKGIGDAFRLQGYEDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGAVAKLARLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQKLEESKARSGGGG 708
M++PGPSLG GEEV++T +AVHKK PGTVWFT+RRALW+AADGKAAVQRVEV WAAV SFQCSPASEARAMMRLLRV EGQPPIIFRFTETPG TPREVLERAQAAVRKALKG A AG S ALKKMKWKTRGGL+G+ASGGQSLRH RDSMPGGRMR+VHDAR+RAALLAGDEVLTAQYREMVDG VVTEEEFWESRRRTLAE+DAK AS+HTGTPSEMPSDLVAE TSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEM+EKEFWTKYIQSAYFNRDRG XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GRLE+GSVDPMVDLTSQWGDHHAREVDDSDP EE +EAANKRKEV+GKFNRHARLVMQP R PALVDSA SATD+PELR+ +EV++EKL+IA+K RY GG + GG + + G S PQS R ++ VTLAEAKAQLGPGFSILG RP V+ AV +P QA+SAL+ECT+EA +G+GDAF LQG HFYASLDRP+SD GA AKL RLETRM+SKYKEL +ER+ LPRNADGNRLSAVIKPLLD LDHAF KLEESK+R GG G
Sbjct: 1 MSVPGPSLGAGEEVVMTAHAVHKKTPGTVWFTSRRALWKAADGKAAVQRVEVAWAAVKSFQCSPASEARAMMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRSKTGVAEGGTNGTGKGKAGKYGGSSSKD-------ALKKMKWKTRGGLLGTASGGQSLRH---RDSMPGGRMRNVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGXXXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLESGSVDPMVDLTSQWGDHHAREVDDSDPTEELSEAANKRKEVVGKFNRHARLVMQPXXXXXXXXXXXRRPALVDSAASATDMPELRLREEVAQEKLDIAHKNRYRGGGGTNRADSNGGXXXXXXSSGALSVGSLSRPQSPRGMVVETVTLAEAKAQLGPGFSILGE-RPRVSGAVASPGQAMSALKECTREASRGVGDAFHLQG--------------------HFYASLDRPKSDAGAAAKLDRLETRMNSKYKELTEERRRLPRNADGNRLSAVIKPLLDSLDHAFLKLEESKSRKGGVG 669
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A6H5JXC6_9PHAE (BSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC6_9PHAE) HSP 1 Score: 651 bits (1679), Expect = 1.570e-224 Identity = 440/653 (67.38%), Postives = 473/653 (72.43%), Query Frame = 0
Query: 71 MMRLLRVAEGQPPIIFRFTETPGDTPREVLERAQAAVRKALKGGAEAGNSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKKMKWKTRGGLMGSASGGQSLRHSRDRDSMPGGRMRDVHDARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTG-AGGGRPALVDSAESATDLPELRIHQEVSREKLEIANKKRYHGGSNSKLGGGASNGASAR----------ASSQAGPSSWPQSRR--LIGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEADKGIGDAFRLQGY-EDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGAVAKLARLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQKLEESKARSGGGG 708
MMRLLRV EGQPPIIFRFTETPG TPREVLERAQAAVRKALKG A AG ALKKMKWKTRGGL+G+ASGGQSLRHS MPGGRMRDVHDAR+RAALLAGDEVLTAQYREMVDG VVTEEEFWESRRRTLAE+DAK AS+HTGTPSEMPSDLVAE TSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEM+EKEFWTKYIQSAYFNRDRG XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G GG G G +R VDDSDP EE +EAANKRKEV+GKFNRHARLVMQP G RPALVDSA SATD+PELR+ +EV+R+KL+IA+K RY GG G +NGA + + AG S PQS R L+ VTLAEAKAQLGPGFSILG RP V+ AV +P QA+SAL+ECT+EA +G+GDAF LQGY EDFIG MHRHFQIVGELLRHFYA+LDRP+SD GA AKL RLETRM+SKYKEL +ER+ LPRNADGNRLSAVIKPLLDCLDHAF KLEESK+R GG G
Sbjct: 1 MMRLLRVTEGQPPIIFRFTETPGGTPREVLERAQAAVRKALKGDAGAGRIRTGVAEGGTNGAGKGKAGKDGGSSKN--------ALKKMKWKTRGGLLGTASGGQSLRHS-----MPGGRMRDVHDARQRAALLAGDEVLTAQYREMVDGAVVTEEEFWESRRRTLAEEDAKTASRHTGTPSEMPSDLVAETTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMSEKEFWTKYIQSAYFNRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRRQARERKRGPYGGPDFAVG------------GSPRSRGVDDSDPTEELSEAANKRKEVVGKFNRHARLVMQPXXXXXXXXVTGRRPALVDSAASATDMPELRLREEVARDKLDIAHKNRYRGG-------GGTNGADSXXXXXXXXXXXGAVSAGSLSRPQSPRGMLVETVTLAEAKAQLGPGFSILGE-RPRVSGAVTSPGQAMSALKECTREASRGVGDAFHLQGYPEDFIGSMHRHFQIVGELLRHFYATLDRPKSDAGAAAKLDRLETRMNSKYKELTEERRILPRNADGNRLSAVIKPLLDCLDHAFLKLEESKSRKGGVG 620
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A835YZ40_9STRA (BSD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ40_9STRA) HSP 1 Score: 235 bits (600), Expect = 5.060e-63 Identity = 269/691 (38.93%), Postives = 350/691 (50.65%), Query Frame = 0
Query: 54 WAAVMSFQCSPASEARAMMRLLRVAEGQPPIIFRFTETPGDTPREVLERAQAAVRKALKGGAEAGNSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALKKMKWKTRGGLMGSASGGQS--LRHSRDRDSMP----GGRMRDVHD---------------ARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTGAGGGRPALVDSAESATDLPELRIHQEVSREKLEIANKKRYHGGSNSKLGGGASNGASA---------------RASSQAG-------PSSWPQSRRLIGAVTLAEAKAQLGPGFSILGAGRPCVARAVVAPRQALSALRECTKEA-DKGIG-DAFRLQGY-EDFIGGMHRHFQIVGELLRHFYASLDRPRSDPGA---VAKLARLETRMDSKYKELNKERQGLPRNADGNRLSAVIKPLLDCLDHAFQ 695
W+ V SPA+ A+AM+++ + P++ + ++ T ++L A++ + K L+ + AG+S XXXXXXXXXXXXXXXX K K G G+ G QS H R R + P GGR D A+RRAALLA D VL AQY ++V+GGV+++ EFW RR L + A A ++ G S + +D V F+L R IH IF MYP V +AY+A VP E++EKEFW KY QS Y+ RDRG A +G ++ AG DDMF RFAA XXXXXXXXXXXXXXXXXXXXXXXXX G EG VDP VDL +Q+ D+H+R VDD P EE+ AA+ + VI + NRHA LVM+P GGG G P D +ATDLPEL + L +AN RY GA GA+ R S +A P + + T A A P ++ P +ARA+ P +AL L+ CTKEA G G A + + ++F+ MHRHFQ++GELLRHFYA + + +L RL T+M SKY EL RQGLPR+A G++LS +IKPLLD LD AF+
Sbjct: 3 WSLVKDHMVSPATSAKAMIKVNPTSSAVDPMVIQVLDSGLATAADILATARSTILKVLR--SYAGSSXXXXXXXXXXXXXXXXXXG------------------KAKSLNGDGGEGAPRGAQSWGAGHKRQRTAGPLSGAGGRALDAAAVQPPAXXXXXXAADVAQRRAALLARDAVLRAQYADVVEGGVLSDAEFWAGRRGMLEGEAAAARARRQGARSALGAD-VRPAVEGAKQVFRLTPRDIHQIFLMYPAVERAYKAKVPVELSEKEFWVKYFQSQYYTRDRGGA----------------AKAGGA--TISAG------DDMFSRFAAEYEXXXXXXXXXXXXXXXXXXXXXXXXXRGNSAQQRLS-GTEG--------VDPTVDLAAQFSDYHSRPVDDRGP-EERAGAADAQA-VIERLNRHAALVMRPRAGGG-----GAPH--DDPAAATDLPELHAPAPPPVQPLHLANASRY---------AGAQRGAAXXXXXXXXXXPVVRRKRVSLEATCIKRARPPHTHTHTSLQNNTATHCSAAAPRVPPQAVQ-LREPNLARALPPPARALDVLQACTKEAAGAGAGGSAATAKSFPQEFVTQMHRHFQVIGELLRHFYAGIGGXXXXXXSDIVQKQLHRLVTKMGSKYDELKALRQGLPRDAQGSQLSTLIKPLLDSLDDAFE 620
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A2P4XBN0_9STRA (General transcription factor IIH subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XBN0_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.770e-21 Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 0
Query: 196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
+ ++RAALLA + L Q+ EMV+ G+++EE+FW SRR +A + +K + TG S + +DL A+ +K+ LNA IH IF YP V+ AYQ VP +MTE EFW + +S YF+RDR +G
Sbjct: 123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNEGGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 246
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A421FK41_9STRA (BSD domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FK41_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.300e-20 Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
+ ++RAALLA + L Q+ EMV+ G+++EE+FW SRR +A + +K + TG S + +DL A+ + G + K+ LNA IH IF YP V+ AYQ VP +MTE EFW + +S YF+RDR +G
Sbjct: 102 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 226
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A7S4DB33_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB33_HETAK) HSP 1 Score: 104 bits (259), Expect = 1.640e-20 Identity = 89/296 (30.07%), Postives = 128/296 (43.24%), Query Frame = 0
Query: 225 EEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTLKFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSGSGSXXXXXXXXXXXXXAISGNKRKSLEAGGGEGGQDDMFLRFAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVEGGGRLEAGSVDPMVDLTSQWGDHHAREVDDSDPLEEQTEAANKRKEVIGKFNRHARLVMQPPDGGGTGAGGGRPALVDSAE---SATDLPELRIHQEVSREKLEIANKKRYHG 517
E +FW +R++ +A++ A ++ TG PS + + E ++ KF L AR I IF MYP V + Y+A VP EM+EKEFW KY QS +F RD G A + +++ S GQDDMF RF A +L+ VDP +DLT+ D+H D P + K VI KFNRHA+LV+ PP + + D A+ T+L ELR + + + L + NK++Y G
Sbjct: 1 EADFWAARQKQMADEQASVNAQTTGIPSTL-NLFQTEHITSRHKKFVLTARMIRHIFLMYPAVERCYKAKVPEEMSEKEFWVKYFQSQFFLRDSG------------------AETPDEKNSH-------GQDDMFTRFEAEEIENEKKKQSRKSAAPHSNGNNAKKQ------------------KLDV-EVDPSIDLTATENDYHPPSTDKLFPTGDPNSKGAK---VIDKFNRHAKLVLDPPS---SDISNKQRKHYDKAKIFGEGTELLELRKEEPPAYDPLNLKNKEQYFG 245
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A662X0X0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X0X0_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.380e-20 Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
+ ++RAALLA + L Q+ EMV+ G+++EE+FW SRR +A + +K + TG S + +DL + + G + K+ LNA IH IF YP V+ AYQA VP +MTE EFW + +S YF+RDR +G
Sbjct: 150 EIKQRAALLAANPTLKRQHTEMVNDGLISEEDFWASRRHLIAAEASKR--QKTGKTSAILTDLAGDNDTGGNVVKYNLNAEVIHQIFIQYPAVYMAYQAQVPDKMTETEFWGAFFKSKYFHRDRKAG 274
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A0P1APW3_PLAHL (General transcription factor iih n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APW3_PLAHL) HSP 1 Score: 106 bits (264), Expect = 2.740e-20 Identity = 58/127 (45.67%), Postives = 82/127 (64.57%), Query Frame = 0
Query: 196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
+ ++RAALLA + L Q+ EMV+ G+++EE+FW SRR +A + +K + T S + +DL A S G + K+ LNA IH IFT YP V+ AYQ VP +MTE EFW + +S YF+RDR +G
Sbjct: 124 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTAKTSAILTDLAANNDSGGNVVKYNLNAEVIHQIFTQYPAVYMAYQEQVPDKMTETEFWGAFFKSKYFHRDRKAG 248
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A3F2RJ52_9STRA (BSD domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJ52_9STRA) HSP 1 Score: 107 bits (266), Expect = 3.100e-20 Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 0
Query: 196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
+ ++RAALLA + L Q+ EMV+ G+++EE+FW SRR +A + +K + TG S + +DL A+ + G + K+ LNA IH IF YP V+ AYQ VP +MTE EFW + +S YF+RDR +G
Sbjct: 123 EIKQRAALLAANPALKRQHTEMVNDGLISEEDFWASRRHLIAGEASKR--QKTGKTSAILTDLAADNDAAGNVVKYNLNAEVIHQIFIQYPAVYMAYQGQVPDKMTETEFWGAFFKSKYFHRDRKAG 247
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Match: A0A0X7YIL8_GLOUL (Putative general transcription factor IIH subunit (Fragment) n=19 Tax=Globisporangium TaxID=1448052 RepID=A0A0X7YIL8_GLOUL) HSP 1 Score: 103 bits (258), Expect = 3.260e-20 Identity = 57/127 (44.88%), Postives = 82/127 (64.57%), Query Frame = 0
Query: 196 DARRRAALLAGDEVLTAQYREMVDGGVVTEEEFWESRRRTLAEDDAKAASKHTGTPSEMPSDLVAEKTSTGTL-KFKLNARTIHSIFTMYPIVFKAYQANVPTEMTEKEFWTKYIQSAYFNRDRGSG 321
+ ++RAALLA + L Q+ EMV+ G+++EE+FW SRR +A + +K + TG S + +DL + + G + K+ LNA IH IF YP V AYQA VP +MTE EFW + +S YF+RDR +G
Sbjct: 37 EIKQRAALLAANPTLKRQHTEMVNEGLISEEDFWASRRHLIANEASKR--QKTGKTSAILTDLSGDNDTGGNVVKYNLNAEVIHQIFIQYPAVHLAYQAQVPDKMTETEFWGAFFKSKYFHRDRKAG 161 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.79.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig125.79.3 ID=prot_P-littoralis_Contig125.79.3|Name=mRNA_P-littoralis_Contig125.79.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=708bpback to top |