prot_P-littoralis_Contig125.74.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Match: D8LFT3_ECTSI (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT3_ECTSI) HSP 1 Score: 278 bits (711), Expect = 8.240e-89 Identity = 159/211 (75.36%), Postives = 175/211 (82.94%), Query Frame = 0
Query: 1 MAEALRVLSLLQQETAIVDEVLGALTRCQRQDRRCPEIGTKLDAHARAAIRKALELLRGKEAKLVKAGEALSAHQQLHAEVESLRQEVAAGEQRVQDCARRLTEANVVLKGPLEDARRLLEAGRNAEAAEIGVSDIVDYAQRISGITSAPSYWKPGMSMVGFAPPAPRPEMMRAGALSAFAVTTGTT-LSASELLRIANVLDKPPDQKNAS 210
MAE RVLSLL++ET+I DEVLGAL RCQ GTKLDA+ARAAIRKAL LL GKEAKL KA EAL HQQLHAEVESLRQEV GEQ+VQDCAR+LTEA+ L+GPL DA+RLLEAGR AEAAEI V DIVDYAQRISGITSAP+YWKPGM+MVGFAPPAPRPEMMRAGALSAFAV+ GT+ LS ELL +A LD+PPDQ A+
Sbjct: 1 MAEVSRVLSLLREETSIADEVLGALARCQS--------GTKLDANARAAIRKALVLLNGKEAKLTKASEALREHQQLHAEVESLRQEVRYGEQQVQDCARKLTEADAALRGPLRDAKRLLEAGRKAEAAEIDVRDIVDYAQRISGITSAPAYWKPGMAMVGFAPPAPRPEMMRAGALSAFAVSPGTSSLSLPELLTLARDLDRPPDQTGAA 203
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Match: A0A835YUZ4_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ4_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.160e-17 Identity = 51/90 (56.67%), Postives = 58/90 (64.44%), Query Frame = 0
Query: 98 CARRLTEANVVLKGPLEDARRLLEAGRNAEAAEIGVSDIVDYAQRISGITSAPSYWKPGMSMVGFAPPAPRPEMMRAGALSAFAVTTGTT 187
C + A+ L+ LE AR+ L A AA + VSDIV YAQRISG TSAP+YWKPGM MVGF PPAP PEMMR GAL+ T T
Sbjct: 59 CVAAIAGASADLRHALESARKSLGEFDKACAAGVAVSDIVAYAQRISGTTSAPAYWKPGMPMVGFLPPAPLPEMMRMGALTRLNAGTAAT 148
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Match: A0A7S3UVI8_HETAK (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVI8_HETAK) HSP 1 Score: 77.4 bits (189), Expect = 9.010e-13 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 0
Query: 94 RVQDCARRLTEANVVLKGPLEDARRLLEAGRNAEAAEIGVSDIVDYAQRISGITSAPSYWKPGMSMVGFAPPAPRPEMMRAGALSAFA 181
R +D A L+ L+ L + +++A R A A + + +V YAQRI G T+AP YWKPGM MVGF PPAP PE +RAG+ A+A
Sbjct: 76 RARDLASALSSKEKDLRIALRKVKPVVDAARLANANPVSLKGLVAYAQRIGGTTAAPPYWKPGMPMVGFIPPAPLPEQIRAGSFHAYA 163
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Match: A0A024TZF4_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZF4_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.630e-11 Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 0
Query: 55 ELLRGKEAKLVKAGEALSAHQQLHAEVESLRQEVAAGEQRVQDCARRLTEANVVLKGPLEDARRLLEAGRNAEAAEIGVS--DIVDYAQRISGITSAPSYWKPGMSMVGFAPPAPRPEMMRAGALS 178
+L+ K+ +L+ + L+ HQ E+++L+ ++A EQ++ A+ L + L RR LE ++++ + ++V YA +I+G TSAP WKP M GF PPAP PEMMRAG LS
Sbjct: 48 DLVVAKDKQLLNTVKQLNQHQSAQKELDALKAQIADKEQKIVRYAKELRSGQQSIASALAKHRRTLEQCHQDSSSKVVLDPLEVVAYAHKIAGSTSAPPNWKPEYPMFGFVPPAPTPEMMRAGVLS 173
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Match: A0A1V9Y9L5_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y9L5_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 6.500e-11 Identity = 45/125 (36.00%), Postives = 71/125 (56.80%), Query Frame = 0
Query: 55 ELLRGKEAKLVKAGEALSAHQQLHAEVESLRQEVAAGEQRVQDCARRLTEANVVLKGPLEDARRLL-EAGRNAEAAEIGVSDIVDYAQRISGITSAPSYWKPGMSMVGFAPPAPRPEMMRAGALS 178
E + K+ L++ + L+AHQ E++ L+ ++A E ++ + AR L + L +R+L A + A + DI+ YA +++ +SAP+ W+PG M GF PPAP PEMMRAG LS
Sbjct: 50 EAILKKDRLLLQTVKQLNAHQVAQKELDRLKAQIAEKEAKIVNYARALRSGQKAISNVLLKHKRVLTNAKASPSATHLAPQDIIAYAHKVASTSSAPAGWQPGFPMFGFMPPAPTPEMMRAGVLS 174
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Match: A0A8K1CAS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAS9_PYTOL) HSP 1 Score: 73.2 bits (178), Expect = 7.250e-11 Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 0
Query: 60 KEAKLVKAGEALSAHQQLHAEVESLRQEVAAGEQRVQDCARRLTEANVVLKGPLEDARRLLEAGRNAEAAEIGVSDIVDYAQRISGITSAPSYWKPGMSMVGFAPPAPRPEMMRAGALSAFAVTTGTTL 188
K+ L+ A + L HQ E+ +++ E+ +Q+V A +L ++ + L+ RR+L+ R + + D+V YA RI+G TSAP W+PG M GF PPAP+ +MMRAG LS V TL
Sbjct: 54 KDRDLLSAVKTLVQHQVAQKELLAVQDEIHEKKQKVVRYAAQLRQSQEDIALVLKKHRRVLDHARQKQKVLLDPRDVVAYAHRIAGTTSAPKEWRPGFPMFGFMPPAPQEQMMRAGVLSRGVVDEVVTL 182
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Match: A0A067BXL3_SAPPC (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BXL3_SAPPC) HSP 1 Score: 72.0 bits (175), Expect = 1.610e-10 Identity = 48/148 (32.43%), Postives = 78/148 (52.70%), Query Frame = 0
Query: 55 ELLRGKEAKLVKAGEALSAHQQLHAEVESLRQEVAAGEQRVQDCARRLTEANVVLKGPLEDARRLLE-AGRNAEAAEIGVSDIVDYAQRISGITSAPSYWKPGMSMVGFAPPAPRPEMMRAGALSAFAVTTGTTLSASELLRIANVLD 201
E + K+ L++ + L+AHQ E+++++ ++A E ++ AR L + L RR+L A ++ + + DI+ YA +++ +SAP+ W+PG M GF PPAP PEMMRAG LS + + T S LD
Sbjct: 51 EAILKKDRVLLQTVKQLNAHQAAQKELDNIKAQIAEKEAKIVQYARELRGGQKAISNVLLKHRRVLSNAKASSTTSHMKPQDIIAYAHKVASTSSAPAGWQPGYPMFGFMPPAPTPEMMRAGVLSRGIIDSIVTKETSSYTSTKRSLD 198
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Match: W4FJC9_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJC9_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.640e-10 Identity = 46/126 (36.51%), Postives = 72/126 (57.14%), Query Frame = 0
Query: 55 ELLRGKEAKLVKAGEALSAHQQLHAEVESLRQEVAAGEQRVQDCARRLTEANVVLKGPLEDARRLLEAGRNAEAAEIGVS--DIVDYAQRISGITSAPSYWKPGMSMVGFAPPAPRPEMMRAGALS 178
+++ K+ +L++ + L+ HQ E+++L+ ++A EQ++ A+ L + L RR L A+++ + DIV YA +I+G TSAP W+P M GF PPAP PEMMRAG LS
Sbjct: 47 DMVVAKDKQLLRTVKQLNQHQTAQKELDALKAQIADKEQKIVRYAKELRSGQQSIASVLAKHRRTLTQCAQDAASKVVLDPLDIVAYAHKIAGSTSAPPNWQPEYPMFGFVPPAPTPEMMRAGVLS 172
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Match: A0A6G0X371_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X371_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 7.300e-10 Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 0
Query: 55 ELLRGKEAKLVKAGEALSAHQQLHAEVESLRQEVAAGEQRVQDCARRLTEANVVLKGPLEDARRLLE--AGRNAEAAEIGVSDIVDYAQRISGITSAPSYWKPGMSMVGFAPPAPRPEMMRAGALS 178
+L+ K+ +L+ + + L+ HQ E+++++ ++A EQ++ A+ L + L RR L+ A ++ D++ YA +I+ TSAP+ W+PG M GF PPAP PEMMRAG LS
Sbjct: 49 DLVVEKDKQLLHSIKQLNKHQAAQKELDAIKAQIADKEQKIIRYAKELRSGQQAISSVLAKHRRTLDQCAQDAPNKVKLAPRDVIAYAHKIACTTSAPANWQPGYPMFGFMPPAPTPEMMRAGVLS 174
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Match: A0A1V9Y7Z7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7Z7_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 9.500e-10 Identity = 44/112 (39.29%), Postives = 65/112 (58.04%), Query Frame = 0
Query: 71 LSAHQQLHAEVESLRQEVAAGEQRVQDCARRLTEANVVLKGPLEDARRLLEAGRNAEAA----EIGVSDIVDYAQRISGITSAPSYWKPGMSMVGFAPPAPRPEMMRAGALS 178
L+ HQ+ E++ ++Q++A E ++ A+ L + L +R+LE NA+AA DI+ YA +++ TSA W+PG +MVGF PPAP PEMMRAG LS
Sbjct: 69 LNQHQRAQKELDRIKQQIAEKEAKIVAYAKELRTGQQAINSVLLKHKRVLE---NAKAAPNTPRFPPQDIIAYAHKVASTTSAALNWQPGFAMVGFLPPAPTPEMMRAGVLS 177 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig125.74.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig125.74.2 ID=prot_P-littoralis_Contig125.74.2|Name=mRNA_P-littoralis_Contig125.74.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=329bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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