mRNA_P-littoralis_Contig124.15.7 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig124.15.7
Unique NamemRNA_P-littoralis_Contig124.15.7
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 3.850e-98
Identity = 202/458 (44.10%), Postives = 265/458 (57.86%), Query Frame = 3
Query:  555 VEWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFK----------------------HFCKI--SKKTAAF---FGRWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*GRSL-RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASSFPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARELSKDASTAVPCERQLRKRSHDVTAFLKGVNDEARFGSEWLVAGI 1844
            +EWAA  LL TPFM YWFK+  M  + LIRV+ KFC AL K +LSWAYNW+RGEGGY L+G  G  +RLP GMRLA++ DFSLLL+ RL ELR  P KYFP+LL +A + L EEE                        HF +   ++K+  F     RW+      +      P +      + F +    G  + +    G+   RA L+ LWP+  +  E V WDEEH++ EIL +DL+ A T  EKDELT GMFSKLN   EFR EVERY+ SAR K E+V DD+  ++ +PR S F ++W+FPLLYEW+ H                      FA        HQQ +     V S Y+TCT+  +SREI  VRLGQF S+QSR++QR HA+N EIR+AG K I VAREL K A+ A+P + QLRKR  D   FL+  +++++ GS W+V  +
Sbjct:  342 LEWAAAKLLGTPFMDYWFKSLCMLDDPLIRVHAKFCVALRKVVLSWAYNWIRGEGGYLLEGRGGVAERLPAGMRLADIADFSLLLVERLEELRMHPKKYFPDLLAWAEKTLSEEEVSANAAQTLLLFDPVPYCPMLQLAHFMRNFQNEKSGLFREMIARWTKWMDMHQH----LPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDDDA-ESQAPRVSGFDMIWSFPLLYEWARH-------------------AILFAPI------HQQLVKS---VCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVARELKKSAAQAIPNDWQLRKRVLDTKQFLRDQSEKSKHGSNWVVRSV 766          
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 6.730e-71
Identity = 165/414 (39.86%), Postives = 219/414 (52.90%), Query Frame = 3
Query:  603 WFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFFGRWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*GRSLRALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASSFPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARELSKDASTAVPCERQLRKRSHDVTAFLKGVNDEARFGSEWLVAGI 1844
            W ++T M  + LIRV+ KFC AL KA+LSWAYNW+RGEGGYFL+G  G  +RLPPGMRLAE  DFSLLL+ RL   + +           +M +L    F            + G+W+ G   G                     E  +G+            RALL+  WP+ Y++ E   W+E++ FRE               ++LTLGMFSKL    EFR+E+ERYAASA  K +VV+D +  +N +PR S F ++WTFP LYEW+CH  F                             HQQ +       S Y+T T+  +SRE+D VRLGQFSS  SR+++R  +SN EIR  G KAI VA  L K AS AVP ERQLR   HD   FLK  +++++ GS+W+V  +
Sbjct:   85 WDESTYMLDDPLIRVHAKFCVALRKAVLSWAYNWIRGEGGYFLEGTGGVAERLPPGMRLAEAADFSLLLVKRLERSQRM-----------SMTRLACSSF------------YEGKWA-GSEEGF--------------------EHAVGQE---------VARALLLAFWPNRYESTEWKGWEEQNTFRE---------------NKLTLGMFSKLAASAEFREELERYAASAHEKKKVVSDVD-VENQTPRVSGFDMIWTFPQLYEWACHAVFFAPI-------------------------HQQLVESSS---STYDTGTQKHDSRELDIVRLGQFSSRGSRRVERLDSSNQEIRDEGDKAIAVATVLKKSASHAVPNERQLRNGEHDWRKFLKDKSEKSKHGSKWVVKSV 401          
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: D7FXZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ1_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 5.030e-64
Identity = 127/251 (50.60%), Postives = 159/251 (63.35%), Query Frame = 3
Query: 1092 RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASSFPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARELSKDASTAVPCERQLRKRSHDVTAFLKGVNDEARFGSEWLVAGI 1844
            RALLV LWP+  ++ E   W EEHD   IL  DL+ ATT  EKD+LT GM+++LN+  EFR+EVE YAASA  K EVV+DD   DNP PR S+F ++W FPLLYEW+ H  FL                            H+Q +     VFS+Y+TCT+  +SREID VRLGQF SAQSR+I++ HASN EIR+AG KAI  AR L K AS AVP ERQ RKR HDVT F++   ++A++G  W V  +
Sbjct:   42 RALLVALWPEKNESAEWREWQEEHDILGILEGDLSEATTPGEKDKLTFGMYTELNESAEFRKEVEVYAASAHEKKEVVSDDLDVDNPPPRVSAFGMIWNFPLLYEWARHAIFLAVI-------------------------HEQLVGS---VFSKYDTCTQQHDSREIDIVRLGQFRSAQSRRIRKLHASNHEIREAGNKAIAEARALRKAASEAVPNERQQRKRGHDVTQFVRTATNKAKYGPGWQVRSV 264          
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 7.270e-63
Identity = 125/244 (51.23%), Postives = 159/244 (65.16%), Query Frame = 3
Query: 1092 RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASSFPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARELSKDASTAVPCERQLRKRSHDVTAFLKGVNDEARFGS 1823
            RA L+ LWP+ Y+  E V WDEEH++ EIL +DL+ A T  EKDELT GMFSKLN   EFR EVERYA SAR K E+V DD+  +N +PR S F ++W+FPLLYEW+CH                      FA        HQQ +      FS ++TCT+  +SREID VRLGQF S+ SR++QR +A+N EIRQAG KAI VAREL K A+ A+P ERQLRKR+HD   FL+  +++++ GS
Sbjct:   49 RASLLALWPELYEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIVVDDDA-ENQAPRVSGFDMIWSFPLLYEWACH-------------------AILFAPI------HQQLVESD---FSTFDTCTQKHDSREIDIVRLGQFRSSHSRRVQRLYATNKEIRQAGDKAIAVARELKKSAAHAIPNERQLRKRTHDTKQFLRDQSEKSKHGS 263          
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 3.820e-47
Identity = 134/405 (33.09%), Postives = 196/405 (48.40%), Query Frame = 3
Query:  558 EWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFFGRWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*GRSL-RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASS-FPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARELSKDASTAVPCERQLRKR 1766
            E+AA+ L +T F +YW ++  M ++ L+RV+V F   L + +  WAYNW+RG+GG+FLKG +G  ++L PGMRL EV DFS LLL +L  +R+ P  YF  +L+     L E   K F     +   FF  +              P +    G   F   +G+     +    G    RA L V W   Y+   R   + E ++R  L  DL   T  R KDELT G+FS+++ +   R E+E+YA S  G  EV       D  +P+ +S    L+ FPLLY+  CH F+                             HQQ +      FS++++C +  +  E+D VR+G + SA+SR I  A A+  +IR AG K ++ ARE    +    P E   RKR
Sbjct:   96 EYAARNLNKTTFRNYWLQSAYMLRDPLVRVHVMFTARLGELLFDWAYNWIRGKGGFFLKG-EGVGRQLFPGMRLVEVADFSRLLLVKLETIRKDPKTYFAAVLERVQTTLSEAMAKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRT--EREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEV-------DQGAPKGTSALARLFDFPLLYKLVCHRFYFVPI-------------------------HQQLIE---AFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKR 462          
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 2.390e-41
Identity = 128/392 (32.65%), Postives = 184/392 (46.94%), Query Frame = 3
Query:  558 EWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFF-----GRWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*GRSL-RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASS-FPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARE 1712
            E+AA+ L +T F +YW ++  M ++ L+RV+V F   L + +  WAYNW+ G+GG+FLKG +G  +RL P MRL E  DFS LLL +L  +R+ P  Y   LLD     L +       ++  +   FF      RW       +      P +    G   F   +G+     +    G    RA   V WP  Y+   R   + E  +R  LA DL   T  R KDELTLG+FS ++ +   R E+E+YA S  G  E+       D  +P+ +S    L+  PLLY   CH F+                             HQQ +      FS+Y++C K  +  E+D VR+G + SA+SR I    A + +IR AG K +K A E
Sbjct:   96 EYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLFPAMRLVEAADFSCLLLQKLETIRKDPQTYVAALLDRVRTTLSDPMRGESFRVELQRGQFFIAEFKKRWIKSMQRHQE----LPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEPRT--ERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGWGDKEI-------DESAPKGTSALARLFDLPLLYRLVCHRFYFVPI-------------------------HQQLIE---AFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATE 445          
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JMW8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW8_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.760e-36
Identity = 105/311 (33.76%), Postives = 149/311 (47.91%), Query Frame = 3
Query:  567 AKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFFGRWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*GRSL-RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASS-FPLLWTFPLLYEWSCHLF-FLRRFSNLSRAYFPDPWITAFA 1490
            A+ L +T   +YW ++  M ++    V+V F   L + +  WAYNW+ G+GG+FLKG +G  +RL PGMRL EV DFS LLL +L  +R+ P  YF  LLD     L +   K F     +   FF  +              P +    G   F   +G+     +    G    RA L V WP  Y+   R   + E ++R  L  DL   T  R KDELT G+FS ++ +   R E+E+YA S  G  E+       D  +P+++S    L  FPLLY+  CH F F+     L  A+F    + A A
Sbjct:   25 ARNLNKTTVRNYWVQSAYMLRDPFFHVHVMFTARLKELLFDWAYNWIHGKGGFFLKG-EGVDRRLFPGMRLVEVADFSRLLLQKLETIRKDPKTYFAALLDRVRATLSDPMVKFFMLAFSEDRVFFAEFKKRWIKWMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFLHVAWPGLYEGEPRT--EREREYRTQLVKDLGGTTEARRKDELTFGLFSCIDGDLSVRSELEQYANSGWGNKEI-------DESAPKSTSELARLLDFPLLYQLVCHRFYFVPIHQQLIEAFFSKNIVCADA 325          
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JQF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF6_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 5.660e-31
Identity = 100/293 (34.13%), Postives = 145/293 (49.49%), Query Frame = 3
Query:  558 EWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFFG-RWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*G-RSLRALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASS-FPLLWTFPLLYEWSCHLFF 1427
            ++AA+ L +T F +YW ++  + ++ ++RV+V     L + +  WAYNW+RG+GG+FLK  +G  +RL PGMRL EV DFS LLL +L  +R+ P  YF      A +KL    F   C   K   A F  RW       +      P +    G   F   +G+     +    G +  RA L V WP  Y    R   + E +FR  L       T  R KDELT G+FS ++ +   R E+E+YA S     EV       D  +P+ +S    L+ +PLLY+  CH F+
Sbjct:   23 KYAARYLNKTTFRNYWLQSVYLLRDPILRVHVMLTARLGELLFDWAYNWIRGKGGFFLK-CEGVGRRLFPGMRLVEVADFSRLLLLKLETIRKDPETYF------AAEKL----FTTNCSEDKGFFALFKKRWIKWMERHQQ----LPLSMARIGCPSFYARTGIMAEGAVEQAVGPKFARAFLHVAWPGLYDGEPRT--EREREFRTQLVKYSGEITEARRKDELTFGLFSCIDSDLSVRNELEQYANSGWSDKEV-------DQGAPKGTSALACLFDYPLLYKLVCHRFY 291          
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JW26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW26_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.820e-20
Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 3
Query:  558 EWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHF 911
            E+AA+ L +T F +YW ++  M ++ L+RV+V F   L + +  WAYNW+ G+GG+FLKG +G  +RL PGMRL EV DFS LLL +L  + + P  YF  LLD     L +   K F
Sbjct:   96 EYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFAALLDRVRTTLSDPMAKVF 212          
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5L8G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.820e-19
Identity = 55/129 (42.64%), Postives = 77/129 (59.69%), Query Frame = 3
Query:  558 EWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFF 944
            E+AA+ L +T F +YW ++  M +N L+RV+V F   L + +  WA NW+RG+GG+FLKG +G  +RL PGMRL EV D S LLL +L  +R+ P  YF  +L+     L E   K F     +   FF
Sbjct:   56 EYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKG-EGVGRRLFPGMRLVEVADCSRLLLLKLETIRKDPKTYFAAVLERVRTTLSEPMEKLFMTNFSEDKVFF 183          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JU73_9PHAE3.850e-9844.10Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN38_9PHAE6.730e-7139.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXZ1_ECTSI5.030e-6450.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSZ3_9PHAE7.270e-6351.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIQ1_ECTSI3.820e-4733.09Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JI13_9PHAE2.390e-4132.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMW8_9PHAE1.760e-3633.76Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQF6_9PHAE5.660e-3134.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW26_9PHAE1.820e-2044.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L8G1_9PHAE1.820e-1942.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig124contigP-littoralis_Contig124:137312..142728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size1999
Hectar predicted targeting categoryother localisation
Exons3
Cds size936
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789540.9843304-UTR-P-littoralis_Contig124:137311..1382311680789540.9843304-UTR-P-littoralis_Contig124:137311..138231Pylaiella littoralis U1_48UTRP-littoralis_Contig124 137312..138231 -
1680789541.0309167-UTR-P-littoralis_Contig124:142585..1427281680789541.0309167-UTR-P-littoralis_Contig124:142585..142728Pylaiella littoralis U1_48UTRP-littoralis_Contig124 142586..142728 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789540.9975884-CDS-P-littoralis_Contig124:138231..1384111680789540.9975884-CDS-P-littoralis_Contig124:138231..138411Pylaiella littoralis U1_48CDSP-littoralis_Contig124 138232..138411 -
1680789541.0063329-CDS-P-littoralis_Contig124:138747..1392511680789541.0063329-CDS-P-littoralis_Contig124:138747..139251Pylaiella littoralis U1_48CDSP-littoralis_Contig124 138748..139251 -
1680789541.016738-CDS-P-littoralis_Contig124:142333..1425851680789541.016738-CDS-P-littoralis_Contig124:142333..142585Pylaiella littoralis U1_48CDSP-littoralis_Contig124 142334..142585 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig124.15.7prot_P-littoralis_Contig124.15.7Pylaiella littoralis U1_48polypeptideP-littoralis_Contig124 138232..142585 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig124.15.7

>prot_P-littoralis_Contig124.15.7 ID=prot_P-littoralis_Contig124.15.7|Name=mRNA_P-littoralis_Contig124.15.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=312bp
MDKQQLQPPRKRSTDTCSVSQDEGDGCVALGYDDDGSSTATAGAIDGSKG
TTAAGQLHCCARPLKRGACGSGGDDGGLFCQIEEVGFILYFMGKVSEPGV
WKQMGLVENKIHQARRNAVDGDLGGCSHSRGTLGTATVEWAAKVLLRTPF
MSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPD
GGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDE
EEFKHFCKISKKTAAFFGRWSSGGSNGRTGTSTFPSAWRAWGVALFTKES
GLGRRRLLSML*
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mRNA from alignment at P-littoralis_Contig124:137312..142728-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig124.15.7 ID=mRNA_P-littoralis_Contig124.15.7|Name=mRNA_P-littoralis_Contig124.15.7|organism=Pylaiella littoralis U1_48|type=mRNA|length=5417bp|location=Sequence derived from alignment at P-littoralis_Contig124:137312..142728- (Pylaiella littoralis U1_48)
CTGTCCTAACTTGCATGCAAACCAGCTCTATGTGGGCACGCTACGCTACA GCAGTACACACACGCAGAATGAATACGCTACCATAGCCCCAATACGGGAC ATCTCACCCGACAGGCGCCAGCTCCAAACGCGCTCCGTGTGCCATGGACA AGCAGCAATTGCAGCCCCCGAGAAAAAGGAGCACCGATACTTGTTCCGTT AGTCAAGACGAAGGGGATGGTTGTGTTGCTCTTGGGTATGATGACGACGG TAGCAGCACAGCAACAGCGGGCGCGATCGATGGTAGTAAGGGAACCACAG CAGCAGGGCAACTGCATTGTTGTGCTCGGCCGCTTAAACGGGGAGCTTGT GGTTCCGGAGGCGATGATGGTGGGCTTTTTTGCCAAATCGAAGAGGTGAG TTTCTCTTTATGTATCACATGTATTATTTCGTGCCATCAGCAGTACCAAC ATCAAACTACTTCCAGCGTCGTTCATTTGAGTACAACATCGTGTTCAGTC TCCTCCCGCCCCACTTACAACTAATAACCTGCTGTACAAGCAGCCAGTAG GTAGCTGCAAGACTACAGCAGTTAGTTGCTGTCTGGAGTGCTGCCTGCAA CGTCCAAGTAGCCCCGGCAATCGGAGAAGACAGAAAAAGAAAAAACACAA AAACACAAACGTATCATCAGATGTTGTCGAGGATGGGAGTCTCCATGCCG TCCTTGCGACGCTGGTGATGATGTCGTCCTAAAGATGTCCTCTTGTTTAT GGCAAGATATGTCACGTCACAATTACAGCATCGCATACCAGCGACAGAGT TTGAAAACCTACTGAGCAATATTTTCCCGGTATTTCACTGCATAGACCGC ACGTTATGGGAGCCAAATTTTTTTCTTAATCTTTCCATACCCCCCCCCAA AGATTTGGGCTCTGCATTTCCAAAAGATATAGTAGCTGTCGCTAAAACGA GCGACAGCTGATAGATGTAACTGTCGTCAGACGTGTGCGTCCGCGGGAGG TGGAAGATACCCTTTCTTCTTCTGCCCGCTGCTGCGTGTGTTCTGTGTTC TGTCTGCCGGCCCCCCTTTAATACCAAGTCATGTAGGGTTCTACTCTAAA ACCTAGTTTAAGCGAACACACGCACAAACTTTTTTTTCTGCATCAGCACC TATATTTGCGGCGAGACTTCAGGCAAGAATAGAAATCTCGCTTCGCTCGA AATATGCTTTTGTCTGTCCGTCCTTTTAGTCCAGGAATCTACTGCTGCTG TATATATCTTGATGCCGTAGAACTGCTCTAGGGAGGGTGGCATGGGTGGC CCATCTCATCGCACTCTGGTTACGAAACCCCCATTACACAATAAATACAG ACCGTGGTGCGCCCATCCAGCGCTCAGCACAACCCTACGAGCATTGCCTT GCCAACCTGGCCGCTGGACGGTAGCGGTCGTTCTTCAGGCGTGCAAAAAA ACGCATATGACCACAGGCTTGAAGCTGGAGATGTCAAACAGCTTTTTGGG GCCCACAGAACAAAAAAGACAGCTTTTCAACAGACACCCGACCACACCAC ACTCGATTTCTCGCTCCATCGGGCACAGATCAAACCTGAAACTTTGAAGG GTAGGATCTCCACTAACTGCTTACCGCCATCAGGGCGTTGGGTTGGCGGT GGGATCCTTCAACCAGCAAGGAGTAGCAGCGCTCGAGGGCGTGAGCTTCG AAAAAAACAGAATCTGTCTTTTTTTTTTCTCTCTTGAAAATAGGGCTTTC TCTGCTGCCTTGAAAATCATGTTCCGAACAGATGTTCGATACACAACGCT GCTACTTCCCTGCTCATTGAATGATCCCACCGCCAAACCAAAGTTTTCGA GGAGGTGTGGCTCGTCCAGAAGTTGGGCCTAACTTTCCCAAATACCCAGC CTCGCGATCTCGGTCCAAAAGTTTTCAAGATTCCAAGGCAACTTTTTGCC CCCATACAAGGTGTACATGGAGAAAGTTTTCTTAAATCACCCTACCCCAC CACCAAAACTCAAGATTAAGAAAAAATTTGGCTCCCATAACGTGCGGTCA TATTTGTGGGAAATTTCTTTGTCCAAAAATCTCCTACTGAAAAAATCAAA TCTACTTTAAATGCTCGTCCAGAAAGAGACGAACCATTGATTTATTGATG TGTGCCTTCATACAAAATTCAAGTTTGGAACAACAAAAAAAATTAGGCCC ACATATGAAACCCTCTCTCTGTAAAGAAGTTGTTTGTGGTACTTGGCAGA GATACTGTTAGGGCTGCGCCTGACCCCTCTTTGAGAGGGTGAAATCTGTC CCGACTTCGTTCCGAGAAAGCTGAATAGATTTATTTTTAGCCACCCTTCT CATCCGTTTCCTCACTGCATCAGTGCGCCCCCCCCTATTTGTAGAGTTAC CGTGGACTGAGCTACCACGTCCTTCGAAGTTTTCTTTTTTGTGTTCTCTG TTTTTTTCTGCCCTTCTGCCTTTTTGCCCCCTGCACGCCTGCGTACTTGC GCTGCCTGAAACTGTTACTGGGCCGGTGAAGAGAGTAGCACGCCCGGTGT CCATTTTATCGACACCTTGGCAACTTAATTCGGTGTCTTTTTGTCTTCTT TGTCACTCCTCTGTGACTTTTTATTTTATTTTTGACTTTTTATTTCTTTT TATTTCATTTTGTGACTTGGCTCTAGACCAGGCTCCCTTTGCTTGTTTTC TTGTATCTTGTTCTATTTTTGTACAGCTTTGTGTGATTTCTCGGGGTCCG TTTTTGTTTTTGCCGGAGTCTCCTTGTCGTGCCTTTATTTGGTGGACTGA GGGGATCTCCCGAGTACTATTTACCTCTTCTGGGGCAAGCAGCCTGTGAC CACGAAAATCGTACCTGATCGGTGGAGTATGGACATTAGAAGGTACTGAG GAGAGATCGGAATGGTTTTTAGTGTGAAGACAACAACAACAACAACAATC AAACAATAACATTTTGAGTGACGTTTTCATCCTTTGGAGTCGGAGAGCCC AGAAAACAAACCAAAGAACGGCGAGTACGTGTGCCGGTGCTGCTGCTGCT CTATGATTCTCTCTCAAGCGCTCTAGAGGCGCGATGCCGATGAAGCAGCA GTAACAGCAGCACTAGCAGTGTACACTGCTGTGCAAAACAGCCGCCTGTG ATTCAGCAAGCAGCAGCAGCCAGAATCACACCACCAGTGGACCGCCATGG CCGATAGCGCGCAGGGACGCGGACAGCAGCCCCAGAGCAATAATCAATCT CAACAAGCAGAGGGCGAGCCTGCTCCTGCTGCTGCTGCTGCTTTTGCTTT CGATGACTTCGTCTTTGCTATCCATGTCGGCTGTCTCTTGCACATCCTGC ACCTCGCGGTGAATGCGGGGATGCAGTCTCTGTTCTTCATGGGCCCCCTC ACTCAGGCCTCGTGGCAGGAGTGGCCAAAGCCTCACCTCGTCGCTTTACT TATATCACTTTGGTACAACACGTCCAGGTCGGATTCATCTTGTATTTCAT GGGAAAGGTTTCAGAACCTGGTGTTTGGAAGCAAATGGGTCTTGTGGAAA ACAAAATTCATCAGGCCCGCAGAAACGCGGTGGATGGTGATTTGGGAGGG TGCAGCCATTCTCGAGGAACGCTGGGAACAGCCACTGTGGAGTGGGCTGC CAAGGTTCTACTTCGCACCCCGTTTATGTCGTACTGGTTCAAGGCGACAC GCATGCCCCAAAATCGTCTCATCCGAGTATACGTCAAGTTTTGTGGTGCG CTACACAAGGCGATCCTGAGTTGGGCATACAACTGGCTGCGTGGCGAGGG TGGATACTTCTTGAAGGGCCCTGATGGAGGACCGAAGCGGCTGCCACCTG GGATGCGATTGGCCGAAGTACCTGATTTCTCCCTCTTGTTACTCTCCCGC CTGACCGAGCTTCGCGAGCTTCCATGGAAGTATTTTCCTGAGCTGCTCGA TTTCGCGATGCAGAAGCTGGACGAAGAAGAGGTGAAAAAATGATTATCCC AGCAGCAGCGGGTTTTCATCTGAACAAATGAATGAAAAAATGTTTTTTAC AACAGTCTGAATTTGACCGAATAAATGAATGAAAAGTGTCTTTTTTCCAA ATCAAGAAAGAGAAGGCTGAACAAAACGTTTTGTGGAACATCTGCTGCTG TTTGCCTGCTCTCTTTCTCTGCTATCTCTGTTGTCCCCTTCTCGCGAGCG CCGGCTAACATGCGTTGTTACTGGACTATTACTACCACCGATCGCGACCC TCACGAGTGTCCTGTGATTCGCCTACCCCTGCGTTCTCTATTCTCCTGAC GCGTGCTGCTTCACCAGTTCAAGCATTTTTGCAAAATTTCGAAGAAGACG GCGGCTTTTTTTGGAAGATGGAGCAGCGGTGGATCAAATGGACGGACAGG CACCAGCACCTTCCCCTCAGCATGGCGCGCCTGGGGTGTAGCTCTTTTTA CGAAGGAAAGTGGGCTGGGTCGGAGAAGGCTTTTGAGCATGCTGTAGGGC AGGAGTTTGCGGGCTTTACTGGTGGTGCTTTGGCCTGACCCATACCAGAA CGTGGAGCGGGTGAGATGGGATGAAGAACATGATTTTCGTGAAATCCTTG CAAACGACCTCGCAGCGGCCACCACGCAGAGAGAGAAAGATGAGCTCACT CTAGGCATGTTTTCAAAGTTGAACGATGAGACGGAGTTCCGACAAGAAGT CGAGCGGTATGCCGCATCCGCGCGAGGCAAGGCAGAGGTTGTGAACGATG ACAACGGAAAGGATAACCCATCACCTCGTGCTTCAAGCTTTCCTTTGCTG TGGACTTTTCCTTTGCTCTACGAATGGTCATGCCACCTGTTCTTTTTGCG CCGATTTAGCAACTTGTCGAGAGCGTATTTTCCAGACCCGTGGATTACCG CGTTTGCCGACTACCGCGGTAAAACTTAAGGACATCAACAGTCGTTACCG AGAGGACCCTTGGTATTTTCCGAGTATGAAACGTGCACAAAGCCGTGCAA TTCGAGAGAGATTGACAGAGTTCGCCTGGGTCAGTTCTCATCAGCTCAGT CTAGAAAGATACAGAGGGCTCACGCCTCCAACGCCGAAATTCGGCAAGCA GGAGCCAAGGCAATCAAGGTTGCTCGAGAATTGAGTAAAGATGCTTCTAC CGCAGTTCCGTGCGAGCGACAGCTTCGCAAACGATCACACGACGTCACCG CATTCTTGAAAGGCGTCAATGACGAGGCTAGGTTTGGGTCGGAATGGCTT GTTGCAGGAATTGCAGGAGGAGTCTAAGTCTGAGAAGTCAGCAAAGTCAC ACAATCTCAGCGAGTCGTCAGGCGATGAGGAGTGACCGGTGTGATCTGTG ATATGTAAGTACAACAAGGAGCCACGGCAATGTGACAACGTTTTTGCGAG TGTAAAACTCATCAACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig124:137312..142728-

>mRNA_P-littoralis_Contig124.15.7 ID=mRNA_P-littoralis_Contig124.15.7|Name=mRNA_P-littoralis_Contig124.15.7|organism=Pylaiella littoralis U1_48|type=CDS|length=936bp|location=Sequence derived from alignment at P-littoralis_Contig124:137312..142728- (Pylaiella littoralis U1_48)
ATGGACAAGCAGCAATTGCAGCCCCCGAGAAAAAGGAGCACCGATACTTG
TTCCGTTAGTCAAGACGAAGGGGATGGTTGTGTTGCTCTTGGGTATGATG
ACGACGGTAGCAGCACAGCAACAGCGGGCGCGATCGATGGTAGTAAGGGA
ACCACAGCAGCAGGGCAACTGCATTGTTGTGCTCGGCCGCTTAAACGGGG
AGCTTGTGGTTCCGGAGGCGATGATGGTGGGCTTTTTTGCCAAATCGAAG
AGGTCGGATTCATCTTGTATTTCATGGGAAAGGTTTCAGAACCTGGTGTT
TGGAAGCAAATGGGTCTTGTGGAAAACAAAATTCATCAGGCCCGCAGAAA
CGCGGTGGATGGTGATTTGGGAGGGTGCAGCCATTCTCGAGGAACGCTGG
GAACAGCCACTGTGGAGTGGGCTGCCAAGGTTCTACTTCGCACCCCGTTT
ATGTCGTACTGGTTCAAGGCGACACGCATGCCCCAAAATCGTCTCATCCG
AGTATACGTCAAGTTTTGTGGTGCGCTACACAAGGCGATCCTGAGTTGGG
CATACAACTGGCTGCGTGGCGAGGGTGGATACTTCTTGAAGGGCCCTGAT
GGAGGACCGAAGCGGCTGCCACCTGGGATGCGATTGGCCGAAGTACCTGA
TTTCTCCCTCTTGTTACTCTCCCGCCTGACCGAGCTTCGCGAGCTTCCAT
GGAAGTATTTTCCTGAGCTGCTCGATTTCGCGATGCAGAAGCTGGACGAA
GAAGAGTTCAAGCATTTTTGCAAAATTTCGAAGAAGACGGCGGCTTTTTT
TGGAAGATGGAGCAGCGGTGGATCAAATGGACGGACAGGCACCAGCACCT
TCCCCTCAGCATGGCGCGCCTGGGGTGTAGCTCTTTTTACGAAGGAAAGT
GGGCTGGGTCGGAGAAGGCTTTTGAGCATGCTGTAG
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