mRNA_P-littoralis_Contig124.15.7 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE) HSP 1 Score: 327 bits (839), Expect = 3.850e-98 Identity = 202/458 (44.10%), Postives = 265/458 (57.86%), Query Frame = 3
Query: 555 VEWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFK----------------------HFCKI--SKKTAAF---FGRWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*GRSL-RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASSFPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARELSKDASTAVPCERQLRKRSHDVTAFLKGVNDEARFGSEWLVAGI 1844
+EWAA LL TPFM YWFK+ M + LIRV+ KFC AL K +LSWAYNW+RGEGGY L+G G +RLP GMRLA++ DFSLLL+ RL ELR P KYFP+LL +A + L EEE HF + ++K+ F RW+ + P + + F + G + + G+ RA L+ LWP+ + E V WDEEH++ EIL +DL+ A T EKDELT GMFSKLN EFR EVERY+ SAR K E+V DD+ ++ +PR S F ++W+FPLLYEW+ H FA HQQ + V S Y+TCT+ +SREI VRLGQF S+QSR++QR HA+N EIR+AG K I VAREL K A+ A+P + QLRKR D FL+ +++++ GS W+V +
Sbjct: 342 LEWAAAKLLGTPFMDYWFKSLCMLDDPLIRVHAKFCVALRKVVLSWAYNWIRGEGGYLLEGRGGVAERLPAGMRLADIADFSLLLVERLEELRMHPKKYFPDLLAWAEKTLSEEEVSANAAQTLLLFDPVPYCPMLQLAHFMRNFQNEKSGLFREMIARWTKWMDMHQH----LPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDDDA-ESQAPRVSGFDMIWSFPLLYEWARH-------------------AILFAPI------HQQLVKS---VCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVARELKKSAAQAIPNDWQLRKRVLDTKQFLRDQSEKSKHGSNWVVRSV 766
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE) HSP 1 Score: 246 bits (627), Expect = 6.730e-71 Identity = 165/414 (39.86%), Postives = 219/414 (52.90%), Query Frame = 3
Query: 603 WFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFFGRWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*GRSLRALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASSFPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARELSKDASTAVPCERQLRKRSHDVTAFLKGVNDEARFGSEWLVAGI 1844
W ++T M + LIRV+ KFC AL KA+LSWAYNW+RGEGGYFL+G G +RLPPGMRLAE DFSLLL+ RL + + +M +L F + G+W+ G G E +G+ RALL+ WP+ Y++ E W+E++ FRE ++LTLGMFSKL EFR+E+ERYAASA K +VV+D + +N +PR S F ++WTFP LYEW+CH F HQQ + S Y+T T+ +SRE+D VRLGQFSS SR+++R +SN EIR G KAI VA L K AS AVP ERQLR HD FLK +++++ GS+W+V +
Sbjct: 85 WDESTYMLDDPLIRVHAKFCVALRKAVLSWAYNWIRGEGGYFLEGTGGVAERLPPGMRLAEAADFSLLLVKRLERSQRM-----------SMTRLACSSF------------YEGKWA-GSEEGF--------------------EHAVGQE---------VARALLLAFWPNRYESTEWKGWEEQNTFRE---------------NKLTLGMFSKLAASAEFREELERYAASAHEKKKVVSDVD-VENQTPRVSGFDMIWTFPQLYEWACHAVFFAPI-------------------------HQQLVESSS---STYDTGTQKHDSRELDIVRLGQFSSRGSRRVERLDSSNQEIRDEGDKAIAVATVLKKSASHAVPNERQLRNGEHDWRKFLKDKSEKSKHGSKWVVKSV 401
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: D7FXZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ1_ECTSI) HSP 1 Score: 223 bits (567), Expect = 5.030e-64 Identity = 127/251 (50.60%), Postives = 159/251 (63.35%), Query Frame = 3
Query: 1092 RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASSFPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARELSKDASTAVPCERQLRKRSHDVTAFLKGVNDEARFGSEWLVAGI 1844
RALLV LWP+ ++ E W EEHD IL DL+ ATT EKD+LT GM+++LN+ EFR+EVE YAASA K EVV+DD DNP PR S+F ++W FPLLYEW+ H FL H+Q + VFS+Y+TCT+ +SREID VRLGQF SAQSR+I++ HASN EIR+AG KAI AR L K AS AVP ERQ RKR HDVT F++ ++A++G W V +
Sbjct: 42 RALLVALWPEKNESAEWREWQEEHDILGILEGDLSEATTPGEKDKLTFGMYTELNESAEFRKEVEVYAASAHEKKEVVSDDLDVDNPPPRVSAFGMIWNFPLLYEWARHAIFLAVI-------------------------HEQLVGS---VFSKYDTCTQQHDSREIDIVRLGQFRSAQSRRIRKLHASNHEIREAGNKAIAEARALRKAASEAVPNERQQRKRGHDVTQFVRTATNKAKYGPGWQVRSV 264
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE) HSP 1 Score: 219 bits (557), Expect = 7.270e-63 Identity = 125/244 (51.23%), Postives = 159/244 (65.16%), Query Frame = 3
Query: 1092 RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASSFPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARELSKDASTAVPCERQLRKRSHDVTAFLKGVNDEARFGS 1823
RA L+ LWP+ Y+ E V WDEEH++ EIL +DL+ A T EKDELT GMFSKLN EFR EVERYA SAR K E+V DD+ +N +PR S F ++W+FPLLYEW+CH FA HQQ + FS ++TCT+ +SREID VRLGQF S+ SR++QR +A+N EIRQAG KAI VAREL K A+ A+P ERQLRKR+HD FL+ +++++ GS
Sbjct: 49 RASLLALWPELYEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIVVDDDA-ENQAPRVSGFDMIWSFPLLYEWACH-------------------AILFAPI------HQQLVESD---FSTFDTCTQKHDSREIDIVRLGQFRSSHSRRVQRLYATNKEIRQAGDKAIAVARELKKSAAHAIPNERQLRKRTHDTKQFLRDQSEKSKHGS 263
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI) HSP 1 Score: 183 bits (465), Expect = 3.820e-47 Identity = 134/405 (33.09%), Postives = 196/405 (48.40%), Query Frame = 3
Query: 558 EWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFFGRWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*GRSL-RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASS-FPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARELSKDASTAVPCERQLRKR 1766
E+AA+ L +T F +YW ++ M ++ L+RV+V F L + + WAYNW+RG+GG+FLKG +G ++L PGMRL EV DFS LLL +L +R+ P YF +L+ L E K F + FF + P + G F +G+ + G RA L V W Y+ R + E ++R L DL T R KDELT G+FS+++ + R E+E+YA S G EV D +P+ +S L+ FPLLY+ CH F+ HQQ + FS++++C + + E+D VR+G + SA+SR I A A+ +IR AG K ++ ARE + P E RKR
Sbjct: 96 EYAARNLNKTTFRNYWLQSAYMLRDPLVRVHVMFTARLGELLFDWAYNWIRGKGGFFLKG-EGVGRQLFPGMRLVEVADFSRLLLVKLETIRKDPKTYFAAVLERVQTTLSEAMAKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEPRT--EREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEV-------DQGAPKGTSALARLFDFPLLYKLVCHRFYFVPI-------------------------HQQLIE---AFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKR 462
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE) HSP 1 Score: 166 bits (421), Expect = 2.390e-41 Identity = 128/392 (32.65%), Postives = 184/392 (46.94%), Query Frame = 3
Query: 558 EWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFF-----GRWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*GRSL-RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASS-FPLLWTFPLLYEWSCHLFFLRRFSNLSRAYFPDPWITAFADYRGKT*GHQQSLPRGPLVFSEYETCTKPCNSREIDRVRLGQFSSAQSRKIQRAHASNAEIRQAGAKAIKVARE 1712
E+AA+ L +T F +YW ++ M ++ L+RV+V F L + + WAYNW+ G+GG+FLKG +G +RL P MRL E DFS LLL +L +R+ P Y LLD L + ++ + FF RW + P + G F +G+ + G RA V WP Y+ R + E +R LA DL T R KDELTLG+FS ++ + R E+E+YA S G E+ D +P+ +S L+ PLLY CH F+ HQQ + FS+Y++C K + E+D VR+G + SA+SR I A + +IR AG K +K A E
Sbjct: 96 EYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLFPAMRLVEAADFSCLLLQKLETIRKDPQTYVAALLDRVRTTLSDPMRGESFRVELQRGQFFIAEFKKRWIKSMQRHQE----LPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEPRT--ERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGWGDKEI-------DESAPKGTSALARLFDLPLLYRLVCHRFYFVPI-------------------------HQQLIE---AFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATE 445
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JMW8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW8_9PHAE) HSP 1 Score: 151 bits (382), Expect = 1.760e-36 Identity = 105/311 (33.76%), Postives = 149/311 (47.91%), Query Frame = 3
Query: 567 AKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFFGRWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*GRSL-RALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASS-FPLLWTFPLLYEWSCHLF-FLRRFSNLSRAYFPDPWITAFA 1490
A+ L +T +YW ++ M ++ V+V F L + + WAYNW+ G+GG+FLKG +G +RL PGMRL EV DFS LLL +L +R+ P YF LLD L + K F + FF + P + G F +G+ + G RA L V WP Y+ R + E ++R L DL T R KDELT G+FS ++ + R E+E+YA S G E+ D +P+++S L FPLLY+ CH F F+ L A+F + A A
Sbjct: 25 ARNLNKTTVRNYWVQSAYMLRDPFFHVHVMFTARLKELLFDWAYNWIHGKGGFFLKG-EGVDRRLFPGMRLVEVADFSRLLLQKLETIRKDPKTYFAALLDRVRATLSDPMVKFFMLAFSEDRVFFAEFKKRWIKWMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFLHVAWPGLYEGEPRT--EREREYRTQLVKDLGGTTEARRKDELTFGLFSCIDGDLSVRSELEQYANSGWGNKEI-------DESAPKSTSELARLLDFPLLYQLVCHRFYFVPIHQQLIEAFFSKNIVCADA 325
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JQF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF6_9PHAE) HSP 1 Score: 134 bits (338), Expect = 5.660e-31 Identity = 100/293 (34.13%), Postives = 145/293 (49.49%), Query Frame = 3
Query: 558 EWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFFG-RWSSGGSNGRTGTSTFPSAWRAWGVALFTKESGLGRRRLLSML*G-RSLRALLVVLWPDPYQNVERVRWDEEHDFREILANDLAAATTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNGKDNPSPRASS-FPLLWTFPLLYEWSCHLFF 1427
++AA+ L +T F +YW ++ + ++ ++RV+V L + + WAYNW+RG+GG+FLK +G +RL PGMRL EV DFS LLL +L +R+ P YF A +KL F C K A F RW + P + G F +G+ + G + RA L V WP Y R + E +FR L T R KDELT G+FS ++ + R E+E+YA S EV D +P+ +S L+ +PLLY+ CH F+
Sbjct: 23 KYAARYLNKTTFRNYWLQSVYLLRDPILRVHVMLTARLGELLFDWAYNWIRGKGGFFLK-CEGVGRRLFPGMRLVEVADFSRLLLLKLETIRKDPETYF------AAEKL----FTTNCSEDKGFFALFKKRWIKWMERHQQ----LPLSMARIGCPSFYARTGIMAEGAVEQAVGPKFARAFLHVAWPGLYDGEPRT--EREREFRTQLVKYSGEITEARRKDELTFGLFSCIDSDLSVRNELEQYANSGWSDKEV-------DQGAPKGTSALACLFDYPLLYKLVCHRFY 291
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5JW26_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW26_9PHAE) HSP 1 Score: 100 bits (250), Expect = 1.820e-20 Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 3
Query: 558 EWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHF 911
E+AA+ L +T F +YW ++ M ++ L+RV+V F L + + WAYNW+ G+GG+FLKG +G +RL PGMRL EV DFS LLL +L + + P YF LLD L + K F
Sbjct: 96 EYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFAALLDRVRTTLSDPMAKVF 212
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Match: A0A6H5L8G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 1.820e-19 Identity = 55/129 (42.64%), Postives = 77/129 (59.69%), Query Frame = 3
Query: 558 EWAAKVLLRTPFMSYWFKATRMPQNRLIRVYVKFCGALHKAILSWAYNWLRGEGGYFLKGPDGGPKRLPPGMRLAEVPDFSLLLLSRLTELRELPWKYFPELLDFAMQKLDEEEFKHFCKISKKTAAFF 944
E+AA+ L +T F +YW ++ M +N L+RV+V F L + + WA NW+RG+GG+FLKG +G +RL PGMRL EV D S LLL +L +R+ P YF +L+ L E K F + FF
Sbjct: 56 EYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKG-EGVGRRLFPGMRLVEVADCSRLLLLKLETIRKDPKTYFAAVLERVRTTLSEPMEKLFMTNFSEDKVFF 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig124.15.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig124.15.7 >prot_P-littoralis_Contig124.15.7 ID=prot_P-littoralis_Contig124.15.7|Name=mRNA_P-littoralis_Contig124.15.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=312bp MDKQQLQPPRKRSTDTCSVSQDEGDGCVALGYDDDGSSTATAGAIDGSKGback to top mRNA from alignment at P-littoralis_Contig124:137312..142728- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig124.15.7 ID=mRNA_P-littoralis_Contig124.15.7|Name=mRNA_P-littoralis_Contig124.15.7|organism=Pylaiella littoralis U1_48|type=mRNA|length=5417bp|location=Sequence derived from alignment at P-littoralis_Contig124:137312..142728- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig124:137312..142728- >mRNA_P-littoralis_Contig124.15.7 ID=mRNA_P-littoralis_Contig124.15.7|Name=mRNA_P-littoralis_Contig124.15.7|organism=Pylaiella littoralis U1_48|type=CDS|length=936bp|location=Sequence derived from alignment at P-littoralis_Contig124:137312..142728- (Pylaiella littoralis U1_48)back to top |