mRNA_P-littoralis_Contig1236.12.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Match: A0A6H5J860_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J860_9PHAE) HSP 1 Score: 316 bits (809), Expect = 1.640e-97 Identity = 156/208 (75.00%), Postives = 171/208 (82.21%), Query Frame = 2
Query: 14 GRDRGGGDAGCVPEEVVRGEVDVAIGKLRADGTGLRDYANAAVGGRVLASRDMVSDTYTPASWWGSSWYWHRAGVENGIGPVESVISEDSSLGACWAMSGSEGLVTVQLPREITVDAVSVEHSSRMVTAESASAPKDFEVWGMRSKDDSFRVELVSGTYDVDGRPIQTFPTTTRPPGVNFSIIQFKILSNWGKRDYTCLYRVRVHGRE 637
G D GG GCV E VVR EVDVAIGKL ADGTG+RDYANAA+GG+VL S+ MVS+TYTP+SWWG S YWH AGVENG+GPVESVISE SSLGACWAMSGSEGLVT+QLP +ITVD VSVEH SRMVT ES SAPK+ EVWGMR+K D+ +L S YDVDGRPIQTFP P GV F +IQFKILSNWG DYTCLYR+RVHGRE
Sbjct: 328 GSDESGGGGGCVSEGVVREEVDVAIGKLMADGTGMRDYANAALGGKVLTSKGMVSETYTPSSWWGPSRYWHGAGVENGVGPVESVISEGSSLGACWAMSGSEGLVTIQLPEKITVDGVSVEHVSRMVTTESGSAPKEIEVWGMRNKKDNNPAKLGSAVYDVDGRPIQTFPI--EPLGVQFKLIQFKILSNWGNPDYTCLYRLRVHGRE 533
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Match: D7FIC3_ECTSI (SUN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC3_ECTSI) HSP 1 Score: 304 bits (779), Expect = 1.140e-94 Identity = 148/198 (74.75%), Postives = 163/198 (82.32%), Query Frame = 2
Query: 41 GCVPEEVVRGEVDVAIGKLRADGTGLRDYANAAVGGRVLASRDMVSDTYTPASWWGSSWYWHRAGVENGIGPVESVISEDSSLGACWAMSGSEGLVTVQLPREITVDAVSVEHSSRMVTAESASAPKDFEVWGMRSKDDSFRVELVSGTYDVDGRPIQTFPTTTRPPGVNFSIIQFKILSNWGKRDYTCLYRVRVHGR 634
GCV E VR EVDVAIGKL ADGTG+RDYANAA+GG+VL S+ MVSDTYTP+SWWG S YWH AGVENG+GPVESVISE SSLGACWAMSGSEGLVT+QLP++ITVD VSVEH SRMVT ES SAPK+ EVWGM++K D +L S YDVDGRPIQTF PPG +IQFKILSNWG DYTCLYR+RVHGR
Sbjct: 217 GCVSEGAVREEVDVAIGKLMADGTGMRDYANAALGGKVLTSKGMVSDTYTPSSWWGPSRYWHGAGVENGVGPVESVISEGSSLGACWAMSGSEGLVTIQLPKKITVDGVSVEHVSRMVTTESGSAPKELEVWGMKNKKDKKPAKLGSAVYDVDGRPIQTF--RIEPPGEQIELIQFKILSNWGNPDYTCLYRLRVHGR 412
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Match: A0A835ZD47_9STRA (UNC-like C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD47_9STRA) HSP 1 Score: 127 bits (319), Expect = 5.810e-30 Identity = 74/201 (36.82%), Postives = 110/201 (54.73%), Query Frame = 2
Query: 44 CVPEEVVRGEVDVAIGKLRADGTGLRDYANAAVGGRVLASRDMVSDTYTPASWWGSSWYWHRA-GVENGIGPVESVISEDSSLGACWAMSGSEGLVTVQLPREITVDAVSVEHSSRMVTAESASAPKDFEVWGMRSKDDSFR-VELVSGTYDVDGRPIQTFPTTTRPPGVN-FSIIQFKILSNWGKRDYTCLYRVRVHGRE 637
C+ +V AI + +DYA A GG+V+ R + S T+T W A G+E +G IS D+SL ACW M G G +TV+L I VDA+++EH+S ++ + +SAPK F + G+ D+S + V L+ G YD+ P Q F P FS++ K+L N+GK +YTC+YR+++HGRE
Sbjct: 30 CISLAEAEAQVHTAIDIAYVEPEQPKDYAWRAAGGQVVQKRGLTSATHTRTM----LERWQLALGMEAAVGGPNEAISSDNSLSACWGMDGQSGQLTVKLATAIRVDAITLEHASAQISPDRSSAPKTFHLLGL--VDESAQPVPLLQGEYDLSASPQQLFRVPVGPYSQTAFSMVTLKVLDNYGKPEYTCIYRLQLHGRE 224
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Match: A0A7M4FD02_CROPO (SUN domain-containing protein 3-like n=2 Tax=Crocodylus porosus TaxID=8502 RepID=A0A7M4FD02_CROPO) HSP 1 Score: 122 bits (307), Expect = 2.660e-28 Identity = 71/185 (38.38%), Postives = 106/185 (57.30%), Query Frame = 2
Query: 92 KLRADGTGLRDYANAAVGGRVLASRDMVSDTYTPASWWGSSWYWHRAGVENGIGPVESVISEDSSLGACWAMSGSEGLVTVQLPREITVDAVSVEHSSRMVT--AESASAPKDFEVWGMRSKDDSFRVELVSGT--YDVDGRPIQTFPTTTRPPGVNFSIIQFKILSNWGKRDYTCLYRVRVHGR 634
K+ D + D+A +G + ASR S +Y P + GS W + P ++++ D S G+CWA GS+G V ++LP +I AV+++H S+ ++ E SAPKDF V+G+ D+ E++ G YD++ IQTF P V+F I+F +LSNWG DYTC+YRVRVHG+
Sbjct: 46 KIYEDDVQMPDWAQKTIGATIDASR--TSKSYEPRNTEGS---WFTLSFLSSANPPDTILQPDVSPGSCWAFPGSQGQVVIKLPEKIQPTAVTIQHISKAISPSGEVTSAPKDFAVYGL---DEETETEILLGKFMYDLEKEVIQTFQLQIEIP-VSFIYIKFCLLSNWGHSDYTCIYRVRVHGK 221
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Match: A0A316VPM0_9BASI (SUN domain-containing protein n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316VPM0_9BASI) HSP 1 Score: 114 bits (285), Expect = 2.160e-25 Identity = 79/208 (37.98%), Postives = 116/208 (55.77%), Query Frame = 2
Query: 74 VDVAIGKLRADGTGLRDYANAAVGGRVLASRDMVSDTY-------TPASWWGSSWYWHRAGVENGIGPVESVISEDSSLGACWAMSGSEGLVTVQLPREITVDAVSVEHSSRMVTAE-SASAPKDFEVWGMRSKDD--------SFRVELVSG-TYDV-DGRPIQTFPTTTRPPGVNF--SIIQFKILSNWGKRDYTCLYRVRVHGRE 637
++ A+ AD G RDYA + GGR++ S S T+ +P +W+ + R G E G PV +++ D + G CWA +GSEG + + L R + V +++EH+S ++ + S SAP+D VWG+ +D S R L+S TYDV + IQ FP + +N +I+Q +I SN GK+DYTCLYRVRVHG E
Sbjct: 2 IEDALETYSADRIGERDYALYSSGGRIIPS--FTSPTFGLRKRSSSPLAWFSKAPLLERVGAE-GQPPVIALVP-DVTPGMCWAFAGSEGTLGISLARRVLVSKITMEHTSPSISHDQSISAPRDVTVWGIGEEDSILPAPIPPSDRHLLLSTFTYDVLASKMIQQFPISREAEQLNIPIAIVQMQIHSNHGKKDYTCLYRVRVHGNE 205
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Match: A0A0K2TYC1_LEPSM (Sad1 and UNC84 domain containing 2 [Falco peregrinus] n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2TYC1_LEPSM) HSP 1 Score: 120 bits (302), Expect = 2.720e-25 Identity = 69/190 (36.32%), Postives = 107/190 (56.32%), Query Frame = 2
Query: 74 VDVAIGKLRADGTGLRDYANAAVGGRVLASR--DMVSDTYTPASWWGSSWYWHRAGVENGIGPVESVISEDSSLGACWAMSGSEGLVTVQLPREITVDAVSVEHSSRMVTAESA--SAPKDFEVWGMRSKDDSFRVELVSGTYDVDGRPIQTFPTTTRPPGVNFSIIQFKILSNWGKRDYTCLYRVRVHG 631
V+ A+ K AD TG+ D+A GG ++++R + ++ S +G ++W R +++ S+ G CWA GS+G V ++L R + V+AVS+EH S+M+ E SAPK F V G+ S DD + + TY+ +G P+QTF T P +++ K+LSN+G YTC+YR RVHG
Sbjct: 394 VEKALIKYDADKTGMFDFALETAGGTIMSTRCTETHDVSWAVHSIFGIPFWWERNNAR-------TILQPSSNPGQCWAFKGSQGSVVIELSRPVNVEAVSLEHISKMMAPERKILSAPKRFAVLGLTSLDDESPIVFGNFTYNDNGNPVQTFHVPTSSP---VKLVELKVLSNYGHLVYTCVYRFRVHG 573
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Match: A0A1U7S647_ALLSI (SUN domain-containing protein 3-like n=7 Tax=Alligator TaxID=8495 RepID=A0A1U7S647_ALLSI) HSP 1 Score: 119 bits (297), Expect = 3.440e-25 Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = 2
Query: 92 KLRADGTGLRDYANAAVGGRVLASRDMVSDTYTPASWWGSSWYWHRAGVENGIGPVESVISEDSSLGACWAMSGSEGLVTVQLPREITVDAVSVEHSSRMVT--AESASAPKDFEVWGMRSKDDSFRVELVSGT--YDVDGRPIQTFPTTTRPPGVNFSIIQFKILSNWGKRDYTCLYRVRVHGR 634
K+ D + D+A +G + ASR S +Y P + S W + P ++++ D S G+CWA GS+G V ++LP +I AV+++H S+ ++ E SAPKDF V+G+ D+ E++ G YD++ IQTF P +F I+F +LSNWG DYTC+YRVRVHG+
Sbjct: 259 KIYEDDVQMPDWAQKTIGATIDASR--TSKSYEPRNEEDS---WFSLSFLSSANPPDTILQPDVSPGSCWAFPGSQGQVVIKLPEKIQPTAVTIQHISKAISPSGEVTSAPKDFAVYGL---DEKTETEILLGKFMYDLEKEVIQTFQLQMELPA-SFIYIKFSMLSNWGHSDYTCIYRVRVHGK 434
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Match: UPI001893E75E (uncharacterized protein LOC119399330 n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI001893E75E) HSP 1 Score: 120 bits (302), Expect = 5.210e-25 Identity = 76/194 (39.18%), Postives = 105/194 (54.12%), Query Frame = 2
Query: 56 EVVRGEVDVAIGKLRADGTGLRDYANAAVGGRVLASRDMVSDTYTPASWWGSSWYWHRAGVENGIGPVESVISEDSSLGACWAMSGSEGLVTVQLPREITVDAVSVEHSSRMVTAE--SASAPKDFEVWGMRSKDDSFRVELVSGTYDVDGRPIQTFPTTTRPPGVNFSIIQFKILSNWGKRDYTCLYRVRVHG 631
+ V V A+ K AD TGL DYA + GG V+ +R +DTYT S +Y + IS G CWA GS+G + V+L + I V A S+EH SR + + ++SAP++F++WG+ S+ DS L S TYD DG +Q F P + ++ KILSN G +YTCLYR+RVHG
Sbjct: 605 DTVTRVVKEALSKYDADKTGLPDYALESAGGSVVNTR--CTDTYTERS---PKYYMFGLPLWTFYRTAREAISPGMHPGECWAFRGSQGHLVVRLAQPIKVTAFSIEHISRSLVSSGHTSSAPREFQMWGLDSETDSPGRLLGSYTYDADGDTLQYFIVQDPEPD-KYEYVEMKILSNHGNLEYTCLYRLRVHG 792
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Match: L7LUZ9_RHIPC (Putative spindle pole body protein n=1 Tax=Rhipicephalus pulchellus TaxID=72859 RepID=L7LUZ9_RHIPC) HSP 1 Score: 120 bits (302), Expect = 5.240e-25 Identity = 76/194 (39.18%), Postives = 106/194 (54.64%), Query Frame = 2
Query: 56 EVVRGEVDVAIGKLRADGTGLRDYANAAVGGRVLASRDMVSDTYTPASWWGSSWYWHRAGVENGIGPVESVISEDSSLGACWAMSGSEGLVTVQLPREITVDAVSVEHSSRMV--TAESASAPKDFEVWGMRSKDDSFRVELVSGTYDVDGRPIQTFPTTTRPPGVNFSIIQFKILSNWGKRDYTCLYRVRVHG 631
+ V V A+ K AD TGL DYA + GG V+ +R +DTYT S +Y + I+ G CWA GS+G + V+L + I V A SVEH SR + + ++SAP++FE+WG+ S+ DS L + TYD +G +Q F P V + ++ KILSN G +YTCLYR+RVHG
Sbjct: 609 DAVTRVVKEALAKYDADKTGLPDYALESAGGSVVNTR--CTDTYTERS---PKYYMFGLPLWTFYRTAREAITPGMHPGECWAFRGSQGHLVVKLAQPIKVTAFSVEHISRSLVGSGHTSSAPREFEMWGLDSETDSPGRLLGTYTYDAEGDTLQYFIVQDTEPAV-YEYVEMKILSNHGNLEYTCLYRLRVHG 796
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Match: A0A151WZS1_9HYME (SUN domain-containing protein 2 n=6 Tax=Myrmicinae TaxID=34695 RepID=A0A151WZS1_9HYME) HSP 1 Score: 114 bits (284), Expect = 1.180e-24 Identity = 77/206 (37.38%), Postives = 101/206 (49.03%), Query Frame = 2
Query: 44 CVPEEVVRGEVDVAIGKLRADGTGLRDYANAAVGGRVLASRDMVSDTYTPASWWGSSWYWHRAGVENGIG-PV-------ESVISEDSSLGACWAMSGSEGLVTVQLPREITVDAVSVEHSSRMV--TAESASAPKDFEVWGMRSKDDSFRVELVSGTYDVDGRPIQTFPTTTRPPGVNFSIIQFKILSNWGKRDYTCLYRVRVHG 631
+ E VR V + AD TG DYA + GG +L++RD S Y A V N G P+ +VI G CWA GS G V ++L + V VS+EH S ++ T E+A+APKDF VWG+ DD S YD G P+Q F R V + II+ K+ SN G +YTC+YR+RVHG
Sbjct: 79 ALSPETVRNMVKNELQTYDADKTGRTDYALESSGGAILSTRDTES-------------YSTGAPVLNLFGIPLCQQQNTPRAVIQIGVLPGECWAFKGSSGSVVIRLLGHVHVSGVSLEHISSLISPTGETATAPKDFSVWGLSDLDDKKPFSFGSFIYDNTGSPLQYFEVQNRAKKV-YDIIEVKVHSNSGNPEYTCIYRIRVHG 270 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1236.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1236.12.1 >prot_P-littoralis_Contig1236.12.1 ID=prot_P-littoralis_Contig1236.12.1|Name=mRNA_P-littoralis_Contig1236.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=159bp MVSDTYTPASWWGSSWYWHRAGVENGIGPVESVISEDSSLGACWAMSGSEback to top mRNA from alignment at P-littoralis_Contig1236:47658..52162- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1236.12.1 ID=mRNA_P-littoralis_Contig1236.12.1|Name=mRNA_P-littoralis_Contig1236.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4505bp|location=Sequence derived from alignment at P-littoralis_Contig1236:47658..52162- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1236:47658..52162- >mRNA_P-littoralis_Contig1236.12.1 ID=mRNA_P-littoralis_Contig1236.12.1|Name=mRNA_P-littoralis_Contig1236.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=477bp|location=Sequence derived from alignment at P-littoralis_Contig1236:47658..52162- (Pylaiella littoralis U1_48)back to top |