prot_P-littoralis_Contig1232.14.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1232.14.4
Unique Nameprot_P-littoralis_Contig1232.14.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length227
Homology
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: D8LAZ7_ECTSI (Transcription initiation factor TFIID subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ7_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 4.580e-66
Identity = 118/164 (71.95%), Postives = 131/164 (79.88%), Query Frame = 0
Query:   68 YTLEVAQDARDYADHAGRLDIGMEDVRLAVRRKQDSLSTGP-SREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQWEAKMEPAPTDSKDSAMDVDPEEAPH---GNRNKKAKITPGLETKKPLVLREKKEQEETIRAKAEAKA-RRCMQAQSGRRG 226
            YT EV  DARDYADHAGR D+GM+DVRLAVR+KQD+LS GP SRED IR+ DE+NRIPL  IPD FG RLPPF+YQ TLPNLQWEA  EP P   +   MDVDPE+AP    GNRNKKAK TPGLETKKPL L+EKKEQEE  RAKAEAKA RR +QAQ+ +RG
Sbjct:   27 YTREVLIDARDYADHAGRTDLGMQDVRLAVRKKQDALSAGPPSREDQIRQADEVNRIPLPVIPDKFGVRLPPFQYQNTLPNLQWEAHAEP-PVHDEAGEMDVDPEQAPSPLSGNRNKKAKTTPGLETKKPLTLKEKKEQEEANRAKAEAKAARRRLQAQNAKRG 189          
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A4V1J4V0_9FUNG (Transcription initiation factor TAFII31 n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4V1J4V0_9FUNG)

HSP 1 Score: 70.1 bits (170), Expect = 8.750e-12
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 0
Query:   68 YTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQ 149
            YT+EV QDA  Y++HAG+ D+ +EDVRLA++ R   S +T PS+E  +   +E N  PL  +P+ FG RLPP ++  T  N Q
Sbjct:   43 YTVEVFQDALIYSEHAGKNDLDVEDVRLAIQGRVNHSFTTPPSKEFLLELAEERNSTPLPLLPEKFGIRLPPEKHCLTAVNFQ 125          
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A151Z337_9MYCE (Transcription initiation factor TFIID subunit n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z337_9MYCE)

HSP 1 Score: 73.2 bits (178), Expect = 1.160e-11
Identity = 36/88 (40.91%), Postives = 56/88 (63.64%), Query Frame = 0
Query:   62 LRCSVEYTLEVAQDARDYADHAGRLDIGMEDVRLAVRRKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQ 149
            L    +Y  ++ QD++ YA+H+G+ ++ + DVRL+++ + +  ST P RE  +   +E N+IPL AIP+ FG  LPP EY  T PN Q
Sbjct:   89 LEFMTKYVFDILQDSQVYAEHSGKTEMDVSDVRLSIQSRVNHTSTPPPREMVVGIAEEQNKIPLPAIPNKFGVFLPPDEYCITNPNYQ 176          
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A197JZG0_9FUNG (TFIID-31kDa-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZG0_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 5.550e-11
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 0
Query:   68 YTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQWEAKMEPAPTD---SKDSAMDVDPEEA 173
            YT +V QDA  Y++HAGR D+G++DVRLA++ R   S ++ P +E  +   +E NR+PL  IP+ +G RLP   +  T  N Q   ++ P PT    +K++A+    +EA
Sbjct:   40 YTTDVFQDALLYSEHAGRTDVGLDDVRLAIQGRVNHSFTSPPPKEFLLELAEEKNRVPLPLIPEKYGIRLPHERHCLTAVNFQLIPEL-PPPTHKDIAKEAALSAGQDEA 148          
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A261Y2B0_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y2B0_9FUNG)

HSP 1 Score: 65.1 bits (157), Expect = 8.200e-10
Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 0
Query:   62 LRCSVEYTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQWEAKMEPAPTDSKDSAM 166
            L  +  YT +V QDA  Y++HAG+ ++ ++D++LA++ R   S +T P +E  +   DE N+ PL  IP+ +G RLPP  +  TL  + ++   E  P D++D  M
Sbjct:   37 LEFAYRYTSDVFQDALVYSEHAGKSELDIDDIQLAIQGRVNHSFTTPPPKEFLLELADEKNKQPLPLIPEKYGIRLPPERH--TLTAINYQILPEVPPKDAQDVEM 140          
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A1Y2GSY7_9FUNG (Transcription initiation factor IID, 31kD subunit-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GSY7_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 1.630e-9
Identity = 35/91 (38.46%), Postives = 57/91 (62.64%), Query Frame = 0
Query:   68 YTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQWEAKMEPA 157
            YT +V QDA  Y++HAGR ++G+EDV+LA++ R   S ++ P +E  +   +E N++PL  IP+ +G RLP   +  T  N Q   ++ P+
Sbjct:   40 YTTDVFQDALLYSEHAGRTEVGLEDVKLAIQGRVNHSFTSPPLKEFLLELAEEKNKVPLPLIPEKYGIRLPHERHCLTAVNFQLIPELPPS 130          
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A4V1IWR4_9FUNG (Transcription initiation factor TAFII31 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4V1IWR4_9FUNG)

HSP 1 Score: 63.9 bits (154), Expect = 2.160e-9
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 0
Query:   68 YTLEVAQDARDYADHAGRLDIGMEDVRLAVRRKQDSLSTGPSREDHIRE-GDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQ 149
            Y  +V QDA+ YADHAG+ D+ ++DV+LA++   ++  TGP   + + E   E N  PL  IP+ +G RLPP +Y  T  N Q
Sbjct:   35 YMTDVFQDAQLYADHAGKRDVDLDDVQLAIQGIVNNSFTGPPPREFLTELAAEKNSAPLPLIPERYGIRLPPEQYCLTGANYQ 117          
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A8H7PEA1_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PEA1_MORIS)

HSP 1 Score: 63.9 bits (154), Expect = 6.930e-9
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 0
Query:   68 YTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQWEAKMEPAP 158
            YT +V QDA  YA+HAGR DI + DV+LAV+ R   S ++ P RE  +    E N++PL  IP+ +G RLP  ++  T  N Q      P P
Sbjct:   49 YTSDVFQDALVYAEHAGRQDIDLADVQLAVQGRVSHSFTSPPPREFLLELAQEKNKVPLPLIPEKYGIRLPHEKHCLTAINFQVLPNAPPPP 140          
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: S2JKY5_MUCC1 (Transcription initiation factor TFIID subunit 9B n=4 Tax=Mucor TaxID=4830 RepID=S2JKY5_MUCC1)

HSP 1 Score: 63.5 bits (153), Expect = 7.690e-9
Identity = 40/108 (37.04%), Postives = 63/108 (58.33%), Query Frame = 0
Query:   68 YTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQW--EAKMEPAPTDSKDSAMDVDPEE 172
            YT +V QD+  YA+HAG+ D+ ++D++LA++ R   S +T P +E  +    E N+ PL  IP+ +G RLP  ++  T  N     +A   P PT  K S+M +D +E
Sbjct:   45 YTADVFQDSLIYAEHAGKSDLDLDDIQLAIQGRVNHSFTTPPPKEFLLELAQEKNKQPLPLIPEKYGIRLPADKHCLTGINFSIVPDAPPPPRPTLDKSSSMMIDTQE 152          
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A6B2LQ22_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LQ22_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 2.380e-7
Identity = 40/106 (37.74%), Postives = 54/106 (50.94%), Query Frame = 0
Query:   54 VHPSAKRTLRCSVEYTLEVAQDARDYADHAGRLDIGMEDVRLAVRRKQDSLSTGPSREDHIREGDELNRIPLRAIP-DLFGARLPPFEYQTTLPNLQWEAKMEPAP 158
            V P     L C   Y  EV  D +DYA HAGR +I + DVRLA+  K D  +  P R++ IR     N+  +  +P  + G  LPP EY  T  N Q  ++M+  P
Sbjct:   22 VVPQLLEFLHC---YVSEVLLDGQDYAFHAGRSNIELADVRLAIESKLDKGTRPPGRQELIRIARRKNQSAIPPLPFKVAGVLLPPDEYCLTKDNYQVVSEMDNPP 124          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D8LAZ7_ECTSI4.580e-6671.95Transcription initiation factor TFIID subunit n=2 ... [more]
A0A4V1J4V0_9FUNG8.750e-1245.78Transcription initiation factor TAFII31 n=1 Tax=Di... [more]
A0A151Z337_9MYCE1.160e-1140.91Transcription initiation factor TFIID subunit n=1 ... [more]
A0A197JZG0_9FUNG5.550e-1139.09TFIID-31kDa-domain-containing protein n=1 Tax=Linn... [more]
A0A261Y2B0_9FUNG8.200e-1035.85Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
A0A1Y2GSY7_9FUNG1.630e-938.46Transcription initiation factor IID, 31kD subunit-... [more]
A0A4V1IWR4_9FUNG2.160e-942.17Transcription initiation factor TAFII31 n=1 Tax=Th... [more]
A0A8H7PEA1_MORIS6.930e-942.39Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
S2JKY5_MUCC17.690e-937.04Transcription initiation factor TFIID subunit 9B n... [more]
A0A6B2LQ22_9EUKA2.380e-737.74Uncharacterized protein n=1 Tax=Arcella intermedia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 21..101
e-value: 1.1E-7
score: 34.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 62..99
IPR003162Transcription initiation factor TAFII31PFAMPF02291TFIID-31kDacoord: 67..148
e-value: 2.8E-11
score: 43.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..226
NoneNo IPR availablePANTHERPTHR48068:SF4TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTORcoord: 67..213
NoneNo IPR availablePANTHERPTHR48068TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTORcoord: 67..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1232contigP-littoralis_Contig1232:39934..41694 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1232.14.4mRNA_P-littoralis_Contig1232.14.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig1232 39209..49708 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1232.14.4 ID=prot_P-littoralis_Contig1232.14.4|Name=mRNA_P-littoralis_Contig1232.14.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=227bp
MFGRRVSPRPLALKIIYNLTMLLVVAALLVGVIDVRAATPLYCYCCRVFS
ASPVHPSAKRTLRCSVEYTLEVAQDARDYADHAGRLDIGMEDVRLAVRRK
QDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQW
EAKMEPAPTDSKDSAMDVDPEEAPHGNRNKKAKITPGLETKKPLVLREKK
EQEETIRAKAEAKARRCMQAQSGRRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003162TFIID-31