mRNA_P-littoralis_Contig1232.14.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1232.14.4
Unique NamemRNA_P-littoralis_Contig1232.14.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: D8LAZ7_ECTSI (Transcription initiation factor TFIID subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ7_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 7.960e-59
Identity = 118/164 (71.95%), Postives = 131/164 (79.88%), Query Frame = 3 
Query:  927 YTLEVAQDARDYADHAGRLDIGMEDVRLAVRRKQDSLSTGP-SREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQWEAKMEPAPTDSKDSAMDVDPEEAPH---GNRNKKAKITPGLETKKPLVLREKKEQEETIRAKAEAKA-RRCMQAQSGRRG 1403
            YT EV  DARDYADHAGR D+GM+DVRLAVR+KQD+LS GP SRED IR+ DE+NRIPL  IPD FG RLPPF+YQ TLPNLQWEA  EP P   +   MDVDPE+AP    GNRNKKAK TPGLETKKPL L+EKKEQEE  RAKAEAKA RR +QAQ+ +RG
Sbjct:   27 YTREVLIDARDYADHAGRTDLGMQDVRLAVRKKQDALSAGPPSREDQIRQADEVNRIPLPVIPDKFGVRLPPFQYQNTLPNLQWEAHAEP-PVHDEAGEMDVDPEQAPSPLSGNRNKKAKTTPGLETKKPLTLKEKKEQEEANRAKAEAKAARRRLQAQNAKRG 189
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BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: D7FU86_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU86_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 8.920e-34
Identity = 139/304 (45.72%), Postives = 176/304 (57.89%), Query Frame = 3 
Query: 1908 LGRADLFWQSHENTAPRFPDDVKHLGD-----RHAHR*PLAPNQRRPDLGAPLPSSGTRLPLPILGPASPS-PQQYLREVMQARYADSMASKRVCVAAAAAXXXXXTRGTADSAGAXXXXXXXXXXXXXXXPSVALAGRRVFQPFGRDVCRHPGDGDDHFEVPSVTEEAAAQVTGGFVAFGGVMNVIKAIHKELFDMGAEIDGVNPDGTREFKETFEVSAVIQREGESEGGDVGLLARVFRVVPTDALKGDQDQAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXRGDYHRYRHVEDVLVSRLTS 2801
            LGR DLFWQSH+NTAP  P+D KHL         AHR  +      P + A         P        P  P+  LRE MQ  Y  SMASKR+C   ++      +RGTADSAG         XXXXXX  S       V  P  R   R PGD  D FEVP++ EE AA+VTGGF+A G + N++KA+ + LF++GAE +G+     R F++T +VSAVI  + +   G VG++A+VFRVV    ++G    AG       XXXXXXXXXXXXXXXXXX   RGDY+RYR VE++LV+RLT+
Sbjct:  390 LGRQDLFWQSHQNTAPLLPEDAKHLIQAMLTVNPAHRINVDQIMNHPYVVA--------APRGAFWKGRPEDPRAVLREKMQELYEQSMASKRLCTVPSS------SRGTADSAGPEGSGSPSAXXXXXXRGSAGY----VENPHDRPTWRGPGD--DLFEVPTMLEEDAAKVTGGFMATGDLKNLVKAVEQALFELGAEENGL-----RTFRQTAKVSAVIPEDPKLGSGRVGVVAKVFRVVSRREVEGS---AG-------XXXXXXXXXXXXXXXXXXRRKRGDYYRYRKVEELLVARLTT 658
[Close]
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A6H5KK56_9PHAE (Protein kinase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK56_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.970e-33
Identity = 106/247 (42.91%), Postives = 134/247 (54.25%), Query Frame = 3 
Query: 1908 LGRADLFWQSHENTAPRFPDDVKHLGD-----RHAHR*PLAPNQRRPDLGAPLPSSGTRLPLPILGPASPSPQQYLREVMQARYADSMASKRVCVAAAAAXXXXXTRGTADSAGAXXXXXXXXXXXXXXXPSVALA----GRRVFQPFGRDVCRHPGDGDDHFEVPSVTEEAAAQVTGGFVAFGGVMNVIKAIHKELFDMGAEIDGVNPD-GTREFKETFEVSAVIQREGESEGGDVGLLARVFRVV 2618
            L R DLFWQSH+NTAP  P+D KHL         AHR  +      P + A   S G     P        P+  LRE MQ  Y  SMASKR+C  A++      +RGTADSAG                PS        G  V  P  R   R PGD  D FEVP++ EE AA+VTGGF+A G + N++KA+ + LF++GAEI GVN + G R F++T +VSAVI  E +   G VG++A+VFRVV
Sbjct:  466 LSRQDLFWQSHQNTAPPLPEDAKHLIQAMLTVNPAHRINVDQIMNHPYVVAASASRG-----PFWKGRPEDPRAVLREKMQELYEQSMASKRLCTVASS------SRGTADSAG----------PECSGSPSAGSGAPGRGGYVENPHDRSTWRGPGD--DPFEVPTMLEEDAAKVTGGFMATGDLKNLVKAVEQVLFELGAEIAGVNKENGLRTFRQTAKVSAVIPEEPKLGSGRVGVVAKVFRVV 689
[Close]
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A4V1J4V0_9FUNG (Transcription initiation factor TAFII31 n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4V1J4V0_9FUNG)

HSP 1 Score: 70.1 bits (170), Expect = 3.180e-10
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 3 
Query:  927 YTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQ 1172
            YT+EV QDA  Y++HAG+ D+ +EDVRLA++ R   S +T PS+E  +   +E N  PL  +P+ FG RLPP ++  T  N Q
Sbjct:   43 YTVEVFQDALIYSEHAGKNDLDVEDVRLAIQGRVNHSFTTPPSKEFLLELAEERNSTPLPLLPEKFGIRLPPEKHCLTAVNFQ 125
[Close]
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A151Z337_9MYCE (Transcription initiation factor TFIID subunit n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z337_9MYCE)

HSP 1 Score: 73.2 bits (178), Expect = 9.280e-10
Identity = 36/88 (40.91%), Postives = 56/88 (63.64%), Query Frame = 3 
Query:  909 LRCSVEYTLEVAQDARDYADHAGRLDIGMEDVRLAVRRKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQ 1172
            L    +Y  ++ QD++ YA+H+G+ ++ + DVRL+++ + +  ST P RE  +   +E N+IPL AIP+ FG  LPP EY  T PN Q
Sbjct:   89 LEFMTKYVFDILQDSQVYAEHSGKTEMDVSDVRLSIQSRVNHTSTPPPREMVVGIAEEQNKIPLPAIPNKFGVFLPPDEYCITNPNYQ 176
[Close]
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A197JZG0_9FUNG (TFIID-31kDa-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JZG0_9FUNG)

HSP 1 Score: 69.7 bits (169), Expect = 2.460e-9
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = 3 
Query:  927 YTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQWEAKMEPAPTD---SKDSAMDVDPEEA 1244
            YT +V QDA  Y++HAGR D+G++DVRLA++ R   S ++ P +E  +   +E NR+PL  IP+ +G RLP   +  T  N Q   ++ P PT    +K++A+    +EA
Sbjct:   40 YTTDVFQDALLYSEHAGRTDVGLDDVRLAIQGRVNHSFTSPPPKEFLLELAEEKNRVPLPLIPEKYGIRLPHERHCLTAVNFQLIPEL-PPPTHKDIAKEAALSAGQDEA 148
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BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A261Y2B0_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y2B0_9FUNG)

HSP 1 Score: 65.1 bits (157), Expect = 2.300e-8
Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 3 
Query:  909 LRCSVEYTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQWEAKMEPAPTDSKDSAM 1223
            L  +  YT +V QDA  Y++HAG+ ++ ++D++LA++ R   S +T P +E  +   DE N+ PL  IP+ +G RLPP  +  TL  + ++   E  P D++D  M
Sbjct:   37 LEFAYRYTSDVFQDALVYSEHAGKSELDIDDIQLAIQGRVNHSFTTPPPKEFLLELADEKNKQPLPLIPEKYGIRLPPERH--TLTAINYQILPEVPPKDAQDVEM 140
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BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A4V1IWR4_9FUNG (Transcription initiation factor TAFII31 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4V1IWR4_9FUNG)

HSP 1 Score: 63.9 bits (154), Expect = 5.660e-8
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 3 
Query:  927 YTLEVAQDARDYADHAGRLDIGMEDVRLAVRRKQDSLSTGPSREDHIRE-GDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQ 1172
            Y  +V QDA+ YADHAG+ D+ ++DV+LA++   ++  TGP   + + E   E N  PL  IP+ +G RLPP +Y  T  N Q
Sbjct:   35 YMTDVFQDAQLYADHAGKRDVDLDDVQLAIQGIVNNSFTGPPPREFLTELAAEKNSAPLPLIPERYGIRLPPEQYCLTGANYQ 117
[Close]
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A1Y2GSY7_9FUNG (Transcription initiation factor IID, 31kD subunit-domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GSY7_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 6.030e-8
Identity = 35/91 (38.46%), Postives = 57/91 (62.64%), Query Frame = 3 
Query:  927 YTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQWEAKMEPA 1196
            YT +V QDA  Y++HAGR ++G+EDV+LA++ R   S ++ P +E  +   +E N++PL  IP+ +G RLP   +  T  N Q   ++ P+
Sbjct:   40 YTTDVFQDALLYSEHAGRTEVGLEDVKLAIQGRVNHSFTSPPLKEFLLELAEEKNKVPLPLIPEKYGIRLPHERHCLTAVNFQLIPELPPS 130
[Close]
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Match: A0A8H7PEA1_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PEA1_MORIS)

HSP 1 Score: 63.9 bits (154), Expect = 2.240e-7
Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 3 
Query:  927 YTLEVAQDARDYADHAGRLDIGMEDVRLAVR-RKQDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQWEAKMEPAP 1199
            YT +V QDA  YA+HAGR DI + DV+LAV+ R   S ++ P RE  +    E N++PL  IP+ +G RLP  ++  T  N Q      P P
Sbjct:   49 YTSDVFQDALVYAEHAGRQDIDLADVQLAVQGRVSHSFTSPPPREFLLELAQEKNKVPLPLIPEKYGIRLPHEKHCLTAINFQVLPNAPPPP 140
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1232.14.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LAZ7_ECTSI7.960e-5971.95Transcription initiation factor TFIID subunit n=2 ... [more]
D7FU86_ECTSI8.920e-3445.72Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5KK56_9PHAE1.970e-3342.91Protein kinase domain-containing protein (Fragment... [more]
A0A4V1J4V0_9FUNG3.180e-1045.78Transcription initiation factor TAFII31 n=1 Tax=Di... [more]
A0A151Z337_9MYCE9.280e-1040.91Transcription initiation factor TFIID subunit n=1 ... [more]
A0A197JZG0_9FUNG2.460e-939.09TFIID-31kDa-domain-containing protein n=1 Tax=Linn... [more]
A0A261Y2B0_9FUNG2.300e-835.85Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
A0A4V1IWR4_9FUNG5.660e-842.17Transcription initiation factor TAFII31 n=1 Tax=Th... [more]
A0A1Y2GSY7_9FUNG6.030e-838.46Transcription initiation factor IID, 31kD subunit-... [more]
A0A8H7PEA1_MORIS2.240e-742.39Uncharacterized protein n=1 Tax=Mortierella isabel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1232contigP-littoralis_Contig1232:39209..49708 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LAZ7
Preferred nameTAF9
PFAMsTFIID-31kDa
Model size5810
Max annot lvl2759|Eukaryota
KEGG koko:K02868,ko:K03133,ko:K05030,ko:K14535
KEGG TC1.A.13.1
KEGG Pathwayko03010,ko03022,ko04924,ko04972,ko05168,map03010,map03022,map04924,map04972,map05168
KEGG ModuleM00177
Hectar predicted targeting categorysignal peptide
GOsGO:0000123,GO:0000124,GO:0000228,GO:0000428,GO:0000785,GO:0000790,GO:0000988,GO:0000990,GO:0000991,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005694,GO:0006139,GO:0006325,GO:0006338,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006996,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016043,GO:0016070,GO:0016569,GO:0016570,GO:0016573,GO:0016591,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0022607,GO:0030880,GO:0031248,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032774,GO:0032947,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043933,GO:0043966,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044798,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046695,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051123,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051276,GO:0055029,GO:0060255,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070461,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090575,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902493,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1905368,GO:1990234,GO:2000112,GO:2001141
Exons9
Evalue7.5e-67
EggNOG OGsCOG5094@1|root,KOG3334@2759|Eukaryota
DescriptionRNA polymerase II transcriptional preinitiation complex assembly
Cds size681
COG categoryK
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko03021,ko03036,ko04040
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1232.14.4prot_P-littoralis_Contig1232.14.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1232 39934..41694 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789538.25934-UTR-P-littoralis_Contig1232:39208..399331680789538.25934-UTR-P-littoralis_Contig1232:39208..39933Pylaiella littoralis U1_48UTRP-littoralis_Contig1232 39209..39933 +
1680789538.3063498-UTR-P-littoralis_Contig1232:41694..421951680789538.3063498-UTR-P-littoralis_Contig1232:41694..42195Pylaiella littoralis U1_48UTRP-littoralis_Contig1232 41695..42195 +
1680789538.3244488-UTR-P-littoralis_Contig1232:42420..425311680789538.3244488-UTR-P-littoralis_Contig1232:42420..42531Pylaiella littoralis U1_48UTRP-littoralis_Contig1232 42421..42531 +
1680789538.3391676-UTR-P-littoralis_Contig1232:43799..439071680789538.3391676-UTR-P-littoralis_Contig1232:43799..43907Pylaiella littoralis U1_48UTRP-littoralis_Contig1232 43800..43907 +
1680789538.3517654-UTR-P-littoralis_Contig1232:44623..449861680789538.3517654-UTR-P-littoralis_Contig1232:44623..44986Pylaiella littoralis U1_48UTRP-littoralis_Contig1232 44624..44986 +
1680789538.3606086-UTR-P-littoralis_Contig1232:45390..455801680789538.3606086-UTR-P-littoralis_Contig1232:45390..45580Pylaiella littoralis U1_48UTRP-littoralis_Contig1232 45391..45580 +
1680789538.3690417-UTR-P-littoralis_Contig1232:45592..456711680789538.3690417-UTR-P-littoralis_Contig1232:45592..45671Pylaiella littoralis U1_48UTRP-littoralis_Contig1232 45593..45671 +
1680789538.380615-UTR-P-littoralis_Contig1232:46656..497081680789538.380615-UTR-P-littoralis_Contig1232:46656..49708Pylaiella littoralis U1_48UTRP-littoralis_Contig1232 46657..49708 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789538.274264-CDS-P-littoralis_Contig1232:39933..402661680789538.274264-CDS-P-littoralis_Contig1232:39933..40266Pylaiella littoralis U1_48CDSP-littoralis_Contig1232 39934..40266 +
1680789538.284738-CDS-P-littoralis_Contig1232:40675..408371680789538.284738-CDS-P-littoralis_Contig1232:40675..40837Pylaiella littoralis U1_48CDSP-littoralis_Contig1232 40676..40837 +
1680789538.2958832-CDS-P-littoralis_Contig1232:41508..416941680789538.2958832-CDS-P-littoralis_Contig1232:41508..41694Pylaiella littoralis U1_48CDSP-littoralis_Contig1232 41509..41694 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1232.14.4

>prot_P-littoralis_Contig1232.14.4 ID=prot_P-littoralis_Contig1232.14.4|Name=mRNA_P-littoralis_Contig1232.14.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=227bp
MFGRRVSPRPLALKIIYNLTMLLVVAALLVGVIDVRAATPLYCYCCRVFS
ASPVHPSAKRTLRCSVEYTLEVAQDARDYADHAGRLDIGMEDVRLAVRRK
QDSLSTGPSREDHIREGDELNRIPLRAIPDLFGARLPPFEYQTTLPNLQW
EAKMEPAPTDSKDSAMDVDPEEAPHGNRNKKAKITPGLETKKPLVLREKK
EQEETIRAKAEAKARRCMQAQSGRRG*
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mRNA from alignment at P-littoralis_Contig1232:39209..49708+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1232.14.4 ID=mRNA_P-littoralis_Contig1232.14.4|Name=mRNA_P-littoralis_Contig1232.14.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=10500bp|location=Sequence derived from alignment at P-littoralis_Contig1232:39209..49708+ (Pylaiella littoralis U1_48)
GCTTCTCAAGGATTCAAGGGTGGCCTTGCACGAGCCGAGGGTGTTGAGCC
ATCTGGTAGACCGTATGCGAAGTGAGTTCTGCTGTGGTGCATTAGTCCTC
GTACAATACATCCATTTGACAAGACAAGATTTATCTCAGTTCAGTTGAGC
TCGGTGTGGGCATATACTTGTCATGTAGAGCGATTTTCGACTCGAATCTT
GTTTTTTTGCCGTGGAGCTTCAACACACAAGAGACCTCGCGCCTGGCCAG
CGTCCTAGCCGAGAACAATTCTCTAGGTAGCTGTCATAGGATCAAAGGAA
AAACTCCGGTGTTGACTTTCTTCCTGTCTGTCGTGACCCCGGCCGGTGCG
CCCAAATTATACCGAAACGTGTAGACTGCCGTCCAGAATGAATGAGATGG
CATACACACACGCACACGCATTTGGGACCGATACTGATGAGATGAAAAAT
CCTCAACCCACCGCTTGGGCATGACCAGCCCAAGGAATGTTGCACGTAAA
CTCGTCCTGCAGTCGTGTGGGTACAACACAGCAAAGTGCTATTTTAGACT
CATGCTGCCGCTTGCCGTACAGCGGCAAAACGCCTTTCCCGAGCATCGAC
CCAAAACATTTCATCTGGCGTATCGATGTATCGTGTGCTTGTGCAAACTC
AGCCAGTCGTTCAGACGTCTGTTGAACTTTTCCTTGGGTGTACCAACGGA
AGTTGTGGATGGGTACTTGTATTAAATGTTTGGGCGCCGAGTTTCTCCCC
GACCATTGGCTCTCAAAATCATCTACAATCTGACGATGCTGCTTGTTGTG
GCGGCGCTCTTGGTTGGTGTTATCGATGTTCGAGCTGCGACACCGCTTTA
TTGCTATTGCTGTCGGGTTTTTTCCGCTTCTCCTGTGCACCCCTCCGCGA
AACGAACACTCCGTTGTTCGGTAGAATATACACTCGAGGTGGCGCAGGAT
GCGAGGGACTACGCGGACCACGCGGGCAGGCTCGATATCGGCATGGAAGA
CGTGCGATTAGCCGTGCGCAGGAAGCAAGATTCGCTGTCCACCGGCCCGT
CACGAGAGGTATGCGCGTTGAGGCTGGCGCTGCTGCCATCGACCAATCTA
CGATAGTAAACCGGATATCCGATACTGGTTCGGTGGGGCCCAGCATCTGG
ATCCGATTGTTTCATGGCATCTATTGAGTGCACAAGACTGTGTGCCGTTG
ACCCTCTCCGATCCGATAAACTGGCCCTGCTATCTAGAACCTGTGTAAAC
ATCCGACATACGGCGCCGTAACCATGGCAACGGTTGGTCGAACACACTTG
CCGGTTTGTGGTAACACGCAATGCAAAGCACCGAATTGCGCAGCGATCAC
ACACGGGCTTGCACTGACTTCAGCGAAGCGAGCCGTGGCAACAATATCTC
TCTCTCGCTCCTTCAGCCTGTCTTGCATCTTTCCCCCTCCATCCTTGTCT
CTTTCACCCCCTCTCAGGACCACATCCGAGAAGGCGATGAGTTAAACCGG
ATACCCTTGCGCGCCATCCCCGATCTATTCGGGGCGCGGCTACCGCCTTT
CGAGTACCAGACCACGCTCCCCAACTTGCAGTGGGAGGCGAAAATGGAGC
CGGCGCCAACCGATTCCAAGGATAGCGCGGTGAGTCCCCCCTTTCCTCGT
AGCGAATACTTGCCTCTACCCTCACGTCGACAATTAGCCGTCGAGCGTTT
TTATTTCCCCGCTCGGTCTGTTTTCCGTTTGCCGACACTGATTTCTGTGT
GTGTAACTCCACTCTTTCGTTTTTCCCTCCCAGCAGCCTTCCCTTTTCGG
TTCAACGGCCCGAGGCCTACTTTTGTCTTGTGCTTTGAAAGCTATGATAG
TCCGGGATCTCACACAGAATGATTTCCCTGCAGTTTTGGTCTCGCTGAAC
TTTTTTTTTAATGTTTATTGGTATTGTGGGTGGGTTGTACCCCATCAAAC
AAGACTGTGATAAATGGTTTTCCATCTCTGCGCACACAACAGGTTGTAAA
CATTATCCTTTTAGCCGCGGGCTCGCCTGTGCGCTCTCAGAACCTCATGT
AACGCTGCACTAGACCGCGTATCGCGCTATCTTTGACAAACACGAGCGCC
CCGGTCTTTACCTTTCTTCGTGTGATATCCCCCCGGCCGCCCAGGCTCGC
TTGTTCTGTTACGGTCTGCTCTGTACGGCCCGCCCGGATGTTGCTCGTCC
CCTGCAATACTTCGCGTCGGTTTCCAAGACGAATTTCGCCTCACAGTAGC
CAACCTCCGCTCAATCTTCCGCCCGACACAACCCCTTTTGTGATGTGCAG
ATGGATGTAGACCCAGAGGAAGCGCCGCACGGCAACCGCAACAAGAAGGC
CAAGATCACCCCGGGGCTCGAGACGAAGAAACCCCTGGTACTCAGGGAGA
AGAAGGAGCAGGAGGAGACCATCAGGGCCAAGGCAGAGGCGAAGGCGCGG
AGATGTATGCAGGCTCAAAGTGGCAGGAGAGGTTGACTTGACGTGTCTTC
GCCACAATGGCTCGAGGATGGGCCGAATAAGTTTGGCTGGCTGCCTGGCT
GACTGTTATCACGCCTTTTCAGCCAGGTTTGGGGTTGTATGGCTGCGGAT
ACGAAGTGTAGTCCACGTACATCAGATTCTTGAGCGAAGCCAAAAAAGAA
ACAGGTGGGAGCTCTAGCTGCCGCCAGCCATGGTTTGGGGACAACAGAGC
TCGCATTGAGCCGCATCCAACACCGGAGTATTGCTGCTTCATCTCCATTG
CCACGCTTTGGGAGAAAAAGGGCCTCAGAGAGCAAACAGAGAGCGACAAC
ACTCGAAGAAATCCTGTGCTGCCATGTCTGAGGCGAGAGAACAAATTAGG
TTGGATTGGCTTTGCGCGCGACGAAGGGCCGGCCAGGACGGGGAGCATAA
ACTAGCGGGGTAATAACGTAGAGAGACCGGACTGCTGATTTCTTTTCACG
AAAGTGCTATTTTACGTGAAGCAGTGTACTCTGTGATGTTGCCATTTTCC
AATTCCGAGCCCCGGCCCGGACGAGTTATTTGTCAGCGATAGGCTGAAGG
GCGGGAGAAAATGCCTACTTAATGTGAAACACCAACACCAACACCAAACA
ACAACACCGAACAACAACACCGAACAACAACAACAACAACAAACAACGAC
AACCGCTATTGTTATCGCTATTCCTTCCGTGCCTTTACCATACCGCCTCT
TTTCGTTTCCAGCTCGGCCGCGCGGACCTGTTCTGGCAGAGCCACGAGAA
CACCGCCCCCCGCTTTCCCGACGACGTCAAGCACCTGGGTGACCGCCATG
CTCACCGTTGACCCCTCGCGCCGGTAAGTCAAGCCATTTTGGGGGCTAGC
ACTGGCTGTAATGTTAGTGTTCACTAGACGTACGGTCAGGGTTTGGTTCA
GGGGCCATTTTGGGGTTGCGATATCGTAGTACTGTGCTGTGTTCACCTAG
ACTTAGGCTCAATTTTTTTTTTTTTTGTTTAGTTGAGCGCAGCAGCTATA
TGTGGCCGTTCCATTGCTACAAGAAGGCGTGATGGCGAGACTCGAGATTC
CGGAAAAAATGTGCAGCCTCCGCGATGAGAGAGAGGAAGAAAAGAGGGGG
GGGGGGTACCCACACTATTCCCTTGTATTATGTAGAAGGAATGCGGCTGG
CCGTGTCCGAGCTTCGCCGCGCGTACGCGATAAGAAAAGCAAGGCTCCGG
CGATCAAGGGCAAATAATCTTGTGGCAGGGCCGGTGGTAGGTAGGTCGTC
TGTGGGCTACATAGGGTTGCGTGGGAGTGTTCCTTGTAGCGACACGTTCT
CGACACAGTTGGAGTCACCGAAACCTCCGTCAGCCGAGGGTGCCGGATGG
ATGCCCTCGCCTCTTTCGGACACCCCTTGGCGAGGTCGAAAAGGGGGTGG
GTAGGTCTCCAGAAGGAATGAGGGCATTCGACACCTCGGCGGAAGGGGGA
GAGTTGAACGTCCACCCGTGCGTGCGTGTATCATTTTGAGTGTATCATAT
GATTCTCTATGAGGTGTCGAGAATGGACGTTGGCCGTCGAATTGAAGCGT
TCTCACGTGACGTGACGTTGATGGATCGGCGCGGCAGTTCTGCACATACA
TTGCTGTTCAATGCGATGCAATGTCCCTAACCCCCCCCCCCCCTCCCTTT
TCTCCCCGGTACGTGTGTATCTCACAGCAGTACTCAAGCACGATAACAGC
AGTTTCATATCCTGCAGGTATCACAGCACTAGTACATAACTTTATGAGGA
GTACGGCGGACCGCCTTTTGATGACGAGCGTATCATATACAGTAGAGGTT
CAAGCCTGGATTTATCCCAACCACGCGTTAAAACTCCCGTGTGACCTTCC
TTCCGTGCGACGCCGGCTGGTGCACCCGCTTCATATCGAAAAGCTGTAGC
AGACAGGTGCCCAAAATGAATGGGACGAAAGCAAACACACACGCACACAC
GAACACAAACACACATATACACACACTACACTACAACAACAACAACAACA
CAAACACAAACACCGGTGCACCTTTTTATCCATGCTACCCCCGCGCCCGC
GCCCCCGCTCCTGCTCCCGCGTACTTATGATACAATTTCAGAATCAGCGT
CGACCAGATCTTGGCGCACCCCTACCTAGCTCCGGCACCCGTCTCCCACT
TCCGATTCTGGGACCGGCGAGCCCGAGCCCTCAACAATACCTTCGAGAGG
TGATAATTAAGAACTGATTGAGAGGCACGTGAGAATACGAAACGGTGTGT
GCTGTGGGCTTGAACAAATGGGGGGGGCGGCCTCGACACATTCTAATTTT
TTCATGGATGGGCCTGAAGCAGGGAAAATATCCGAGCGTGGTTTTGTGAA
CGAACCTGGTTTTGAAAAGATTGTTGACTTGGAAATTGTTCACGTGGTAT
TCAAATACGAAATACTTCGTAAACTTTTGCATCAAGCTCGAACACAGCAG
TTGACCGGTTTTAGGAGCTCGACAGCATCTCCACGCCCAATAAGAGAAAC
GGGGAGGGACCCTGAGTAGTGTGATGTGGAGACATGAACGGCCCCAAAAA
CATTTACGACACATCACATGATATCGTTGTAGGACAACACACAACAGGTA
GGTGTGATGATCACATTGGAGGCGGCCACATCAGACCCTGGGTACTTACT
TGCTTGCACGGCCTTTGAAACCATAGACTTGAAGTTTATACACGAAGTGT
GGTTTTTGCTCATCACATTTCACGACAAACAGCAGATATTACTCTACCGG
TACTTGCGAACATGATTTTGAAACCGCTTATTTTCCCTCCGTGGTCATTA
CGTCACACGACAGATACCAGACATTCTCCTTGCGAGCACGATCTTGAAAC
CATTTTTTCGTTTTTCATTTCCTTTGGTCATCACATTACACGCCAACCAC
ATGAAACAAAAGCAGGTGATGCAGGCCCGCTACGCCGATTCCATGGCGTC
GAAACGCGTCTGCGTGGCGGCGGCGGCGGCGGCGGCGGCGAGCAGCACGA
GAGGGACCGCCGACTCCGCCGGTGCTGAGCCATCCGGCTCTTCCCCGTCG
GCAGCAGCATCGTCCGCGGCACCCTCGGTGGCCCTTGCGGGGCGACGAGT
GTTCCAGCCGTTTGGCCGCGATGTTTGTCGACATCCAGGCGATGGCGACG
ATCACTTTGAGGTCCCCTCCGTGACGGAAGAGGCTGCGGCTCAGGTGACG
GGGGGGTTCGTGGCGTTCGGGGGCGTGATGAACGTCATCAAGGCTATTCA
CAAGGAGCTGTTCGATATGGGTGCCGAGGTGAGAATGATGTGCGTGTGGT
ACACGTGTGGATTTTCACGTGTTGGCAAGAGTATCCGAAACCGGAGGACC
GGCATGCGAAAACAACAGAAGCAATACGGTGATTAATACTGTAGTGATAA
TTGTAGCAATACTTAGATTCAAACCATATTAAATGTAGTAATAACACCAT
TCCAGTTTCTTCTGCTTTCCCAAAATCATTAAAATAACGTGAGTTCTGAC
AAGCACACCATTACAGTAGTACGCTTTGTCCTGCCCCACACGCACACACC
GAAAAATAAGGACTGAAAACACAAAATATTTCAATTGCACAAGTATGACA
CCGTATGTATTACGTACCTTAAACAAACCCGCGTATACGTATGTTACTTT
ACCCTGCAACTTTGTCACCGCTGATCCCACAGATCGACGGGGTCAACCCT
GACGGCACGAGAGAGTTCAAGGAAACGTTCGAGGTGTCTGCGGTGATCCA
GCGGGAGGGCGAGAGCGAGGGCGGGGATGTAGGCCTGCTCGCCAGGGTGT
TCCGCGTCGTGCCGACGGATGCTCTGAAAGGGGACCAAGACCAAGCTGGT
GGTGGTACCGATGCCGCTACTCCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCCACTGGTGATAAGCTGGTGGTGGTGCTCAGGAGAAGGCGGG
GCGATTACCATCGGTGAGACCCCCTTTGGGGGAGAGATTGAGTGACGCCT
CCGTAGGCCCCTCTTTTTGTTATACAGCCTGCAAAAAGGGGAGACCTTTT
GTGCGTTTTTTGTGTGGTATGTCTCTCACCCATTTCGGACGCCAGTCCAC
GTACACCACCCAAGCGGTGTCTCCCATCTGTCATATCTCTCACAGAATCT
GTGTCAGCGGCAGCGGACGGGTTGCTGCGGTTGCTGCCGCCCGAGCTCTC
GCGGCTGTGTTGGGGCCCTACTGCTGTGTGAGCTGCCGGTGGCATGAAGC
ACCGGTAGGCAAGACCTCGGGTTTCATGTTGTAATGAAGCGGCACCTGGT
ACGAATAAAATAAAGTTTGTACCCCACGTTTTTGGCGTATCACAATTTAG
GCCCCACCATAGAAAATGTCATGTACATTTGGGTTTTGATACCAGTAGTG
GCCGCACTACCTGCTGAATAAGTACCTGAAATACCAGGTGGTGCTATAAA
GATTTTTCGCGCCACGTATCTATCGGAGAATTCGACGGGCAGCAGATGCT
GTGGCCAACTTTTCCGGAACAGCGGCGGCAAGGATACATACGCAGCAGCA
GACCGGACCCACTCCATCGATCTCTTCAACTTTACTTGGGATACAGTATT
ACTTGATGCATTAAACAGCAGCATGGTACCTGGTGCTTCGAAGTACTGTA
TATACTTGTTGTGGACTATTACACTTGCTTCGTTATTTTTCGCCTGGATT
CGCTACCGTGCCACTCCCACTGGCTAGATTGTACGATAAGCTGATGTGGG
AATCATCATCAGCAACACTGATCACAAGAAGCACCACCGCAACATCTCAA
CCACCACAACAACGACATCTCAACCACACTTGCCGGCACCCGTCTCATCC
CTCCATCTACCTTCCCCTCTATCATACCCCTCCTATGATATTGATATTGC
TTTGCCGCCGTTGTCGGCCTCACCCGGTCGTTCCTCCCTCCCTCCCAGCT
ACCGCCACGTAGAAGACGTGCTCGTATCCCGCCTGACTTCGGAGGCTGTG
ACGAAGAAAGAGGAGCCCGTCGGGACGAAAAATCAGAGGAGTCCCGCCCG
ACCGTCTCGCGCCAAACAAGAATCCGTCGGGATGAACAGCGAGAGGGACG
CCGAAATGTCTTACGTGAACGTGTCTCCTACGCCCTAGCGGATGGTTACA
GACACGGGCGCACGGAAACGGGAGCAGGCGCGTTGGGAAAGGATGGAACC
CTATCAAACTGAAGGAACGATACGGAGCTTTTTAAGGGAATAACGTGGAG
AGTGAAGCATAGCACAATGAATGATGGTCGAGACAGGAGGATGGGACCCT
GCGGAAGGGATAATGCGCGGCTTCAAAGGGGGAAGAGCGTGGAGATGGGA
TGTAACACTACTATATCATACTGCAGGAAAATTAAGGAGATTCGGGGGAG
AGCGTTGAGAATGAAGCAGAACATTAAGGTCGCAAGCATGTTTTTCATCG
GTGTAAATGTACTGGTTTGGTGCGGAGTAGACAAGCAGGCCCCAAGCGTG
TCTGCCTGTGGTTCTCCCATGACATGAATGAAGTGAGTCAATCAAGTGAC
GGACGTGTGAACATAAGACATTCAGAGTGTCAAGGAACCGCACCGCCAGG
AGAGCTTTTTTCTCTCTCTTTTGTTTTTCTTTGTGCTCTGTATCGTAGTG
TTTTCTGTCTCTTTTTTTTGTGCACGAAGTATTACACGAACTTGTTTCCC
TCTTTTTTCATCCACGGAGTATTGCACGAGCTTGTTTCTCTTTTTCTTTT
TCTGTCTTTTTGTTTTCCTTTGTGCTTTGTATCATACAAAGTAGTTTTAT
TCTCTCTTTTTTCTTTATGCACGAAGTATCAGGTTGTACACGCTTTTCAG
CTTGTCTCTCCGGCGATGATGTGACCTGGACAATTCAGGTCACAGACATG
CCCATCAACTTGGACTGTTGCAGGCGTTATCAACGCGGGCGCGGCGGCGG
CGGCAGGGGAGAGGGGAGAGGGGACCTCAAGAACCGAGGCATCGAGTGGC
CGCAAATTTAGAGAAAGACAAAAACACCGAGGTGACGCGCCCCAGGAGGA
AGGTGGTTGTTTTTCAAGTATTGGGCGGCGTTGGTTTCATGACAGGGTCG
TGACGGCACACATTGGTCGTGTGCGGTATGTGGATGGCGTGCGGCAACTC
GTCTTTCCGGCGAAGGAGGATCTGAAATAAACACCACGTTCCCAAGTATT
CTCCGGTGGTGGTGGTGGTGGTGGTGGCTGTATGGAGGCTGTTCGGGTAC
GATTCGAGGTTGAGTCACTGAAACCCTTGCATGTTCGTATGGAACGGGTA
TTAAATCTATCATATCGAGTACGGAGCATATGACGATACTACTCAAGAAC
TGGCATGACACGTGATTTCAATGGGTGAAATGGCTTTTTCCTGTCCGTGT
GACCCCCCCCCCGATGATGCGCCAGCGTACGTGCGCACTCCGAAAATATT
TGACTGCCGTGTGCATGACAGATGGGATGGCAACACACTCACACATACAG
ACATGGCTGGATGCTTGTTGGTGTTTTTTCTTTCATGTTTGTGAAATAAG
TGGCCTGGGTCTCTTTGAAAGGTTACCTTGCTCAGTGCGACGGGCCTTAC
AGGCACCCTTGATGACTGGAAGGCGTTATCAACGAGGGTTAGAGCGGCCT
GACCGCGGTGGGGCCGTGCTGCATCGAGAGGTGACGCTTTATATCAGGGT
AGGATTTGTCGATCGTGCATGCATGCGTCCGTTGGTCCGTATTCGGCAGT
ATTCATGCACTTCGTACTTTTACATCCAAGCCCGGCACCTCCCTTGCAGT
GAAGGATCGGTGGGTGGGTGTGTGTATGTGTGACGTATACGAACCTGAAA
CAAACATTATTATCGTTATTCGCCTTTAGAAAGTGTGAAACACGAAGAAG
TAAAAACATAACGCAAAGTAGTGTCTACGGAGTATTTCGTACATCTTGTC
AGGGATATACTTCGAAGTATACATCTTGAGCGTGGTGAAGGCTAAGAACG
CACAAGTATTCTCACTTGCTTTTGCGGTGTCGGCAACTCGACTAGCAGTT
GGATTGGTCAGGAGCATTATTACATCTTCTGGGAAAGATTCCAGAAGGGT
TCCAGAAGGGTTCTGGTCTTAGCTCTAGAAGGGTTCTAGAAATGGTTCCA
GAAGGGTTCTAGAAATAGTTCCAGAAGGGTCCTTGGACTAGTTCCAGAAG
GTTCGATATCTAGAAGTATTTCGTAGCCATATCGAGACGGTGGCGCTTCG
CCCAACCTTCTCACTCCTCAACATCACCATCAAACCTGGCCCTGGGGTCA
GTCAGTGTGATAATACAAGTCATTTCATCTGTTTTCTGCCGCAGACACCT
CTCTGCCGAGTGAGTGCGTCCAGCAGCTCTACTGCTGTACAACCTCTGAG
AGCTACACAGCTCGACACAGGGATACGCTTTGCAACACAGCGAGCTACAC
CGCTGCAACAAGCAATATCCTTTCACACATCTCATATACAGAAAACGTGA
GAGATGTCAAACTTGTACCCAGCAGACACACCAAAACACACTGTATCAAT
CTACTACTTCGTGTCAATGTATCTATTCACCGTATACTTGTATCGTTCCT
TGTTGTTGCAGTGAATTAATGATCAACAGACCCAGCCGCGCAAACAGCGC
ATTTTTTCGTTTCGTGTGACACAGATTGGGGTTTGACACTCTTTTTTTGT
TGATGGGTATTACGAGGTAAAACCATGGTTGAGGTTTGTCTTGGTTATTT
TTTGTTTGTCGGACTGTTTCCAATTTTTGTTTTTCTTTCGAGCCTGTTAT
TTTATATCTGTATTTTGTTTGGTACTCTGGCCACCACAGATGGTACCCCA
ACGGTACCATATCTGATTTGACTGTGGGTGATCATAGTCCATATATTATA
TTTTTATTTTTTTCCTCCTAGCACGATATGTGCCTGGTTTGTGACCACGG
GCCAGACTGCGGCGGTAGTGAGCTAATGTGAGAATCATCAACAACAACAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1232:39209..49708+

>mRNA_P-littoralis_Contig1232.14.4 ID=mRNA_P-littoralis_Contig1232.14.4|Name=mRNA_P-littoralis_Contig1232.14.4|organism=Pylaiella littoralis U1_48|type=CDS|length=681bp|location=Sequence derived from alignment at P-littoralis_Contig1232:39209..49708+ (Pylaiella littoralis U1_48)
ATGTTTGGGCGCCGAGTTTCTCCCCGACCATTGGCTCTCAAAATCATCTA
CAATCTGACGATGCTGCTTGTTGTGGCGGCGCTCTTGGTTGGTGTTATCG
ATGTTCGAGCTGCGACACCGCTTTATTGCTATTGCTGTCGGGTTTTTTCC
GCTTCTCCTGTGCACCCCTCCGCGAAACGAACACTCCGTTGTTCGGTAGA
ATATACACTCGAGGTGGCGCAGGATGCGAGGGACTACGCGGACCACGCGG
GCAGGCTCGATATCGGCATGGAAGACGTGCGATTAGCCGTGCGCAGGAAG
CAAGATTCGCTGTCCACCGGCCCGTCACGAGAGGACCACATCCGAGAAGG
CGATGAGTTAAACCGGATACCCTTGCGCGCCATCCCCGATCTATTCGGGG
CGCGGCTACCGCCTTTCGAGTACCAGACCACGCTCCCCAACTTGCAGTGG
GAGGCGAAAATGGAGCCGGCGCCAACCGATTCCAAGGATAGCGCGATGGA
TGTAGACCCAGAGGAAGCGCCGCACGGCAACCGCAACAAGAAGGCCAAGA
TCACCCCGGGGCTCGAGACGAAGAAACCCCTGGTACTCAGGGAGAAGAAG
GAGCAGGAGGAGACCATCAGGGCCAAGGCAGAGGCGAAGGCGCGGAGATG
TATGCAGGCTCAAAGTGGCAGGAGAGGTTGA
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