prot_P-littoralis_Contig123.38.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig123.38.1
Unique Nameprot_P-littoralis_Contig123.38.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length324
Homology
BLAST of mRNA_P-littoralis_Contig123.38.1 vs. uniprot
Match: A0A6H5KLN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN5_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 5.380e-95
Identity = 175/344 (50.87%), Postives = 217/344 (63.08%), Query Frame = 0
Query:    1 MKAAVGLTFGVILSAAPAVIADECHNICAEVKKGISFKAGCTPFRNSLPKPKVSSKCQSGFKAAIDMNCYDACVNGGHLQPYISEQRLDEVCKGTVNETPRPLCHDACVRGYRSGVNDMSTSLAKFMDEAAPKILAALQEDTAVRQAAQSAHDIGPVTSFTTVETDVKPIASTEGVLGTGGREAVKT--GAVVPL----EHDEI--LDENVGEREEVEGVDEDLPPSVDEIETVED---------NAAVAIDGEKKEK------KEAGNQDEDIYMWIEDE-EMVLLSLPITVDNAQKELTIFEGDDAMDVVQAFCRENMPGEGAACADELIRVVQEKISPGHA 320
            MKA +  T  VILS   A  ADECH+ICA VKK + FKAGC+ FRNSLP+PKVSSKC +GFKAA++ NC+DACVNGG LQP++ E+RLDE C G +N+TPRPL        YRSGV DM+TSL K M EA+P ++ AL+ +T  RQAAQ  H +    S T   T   PIA  E  +    + A  +  G   P+    EH E   L+   G + + + + ++ P +  +I  VED         +A +A DGE   +      K+  N+ ED YMWIEDE E VLLSLPITVDN  KEL I +GD  +DVV AFCRENMP EG ACADELIRVVQ+KIS G A
Sbjct:   24 MKAPLVFTINVILSVT-ATSADECHDICANVKKSVGFKAGCSEFRNSLPRPKVSSKCHTGFKAAVERNCHDACVNGGRLQPFLVERRLDEACNGALNDTPRPLXXXXXXXXYRSGVKDMTTSLGKLMAEASPAVITALKGNTLSRQAAQKTHVVATDDSKTVEGTSEGPIAFAEDAIARPSQMADLSDHGNDTPVPEEKEHGEAQDLESKGGLQTDAQVIGDEPPLAAGDIYKVEDEPDLARDADSALIAPDGEMDAQHKLAAIKDGENKGEDNYMWIEDEKENVLLSLPITVDNVLKELVIVKGDQPLDVVLAFCRENMPEEGPACADELIRVVQDKISTGKA 366          
BLAST of mRNA_P-littoralis_Contig123.38.1 vs. uniprot
Match: D7FJ15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ15_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 8.680e-36
Identity = 117/327 (35.78%), Postives = 142/327 (43.43%), Query Frame = 0
Query:    1 MKAAVGLTFGVILSAAPAVIADECHNICAEVKKGISFKAGCTPFRNSLPKPKVSSKCQSGFKAAIDMNCYDACVNGGHLQPYISEQRLDEVCKGTVNETPRPLCHDACVRGYRSGVNDMSTSLAKFMDEAAPKILAALQEDTAVRQAAQSAHDIGPVTSFTTVETDVKPIASTEGVLGTGGREAVKTGAVVPLEHDEILDENVGEREEVEGVDEDLPPSVDEIETVEDNAAVAIDGEKK------EKKEAGNQDEDIYMWIE-DEEMVLLSLPITVDNAQKELTIFEGDDAMDVVQAFCRENMPGEGAACADELIRVVQEKISPGHA 320
            MKA +  T  VILS   A  ADECH+ICA+VKK + FKAGC+ FRNSLP+PK                   A   G   +P    Q  D    G     P    H                                               +I  + S   ++TD +        +G G   AV  G +  +E +  L  +                         D+A +A DGE        E K+  N+ ED YMWIE +EE VLLSLPITVDN  KEL IFEGD  +DVV AFCR+NMP EG ACADELIRVVQ+KIS G A
Sbjct:    1 MKAPLAFTVNVILSVT-ATSADECHDICADVKKSVGFKAGCSEFRNSLPRPKPI-----------------AFAEGAIARP---SQMADLSYHGKDTPVPEEKEHG----------------------------------------------EIQVLESKGGLQTDAQ-------AMGDGPPLAV--GDIYKVEDEPDLARDA------------------------DSALIAPDGETDAQHELPEIKDGENKGEDNYMWIEHEEENVLLSLPITVDNVMKELVIFEGDQPLDVVLAFCRDNMPEEGPACADELIRVVQDKISTGKA 227          
BLAST of mRNA_P-littoralis_Contig123.38.1 vs. uniprot
Match: A0A7S2BSI7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BSI7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.720e-6
Identity = 26/62 (41.94%), Postives = 41/62 (66.13%), Query Frame = 0
Query:  255 IEDEEMVLLSLPITVDNAQKELTIFEGDDAMDVVQAFCRENMPGEGAACADELIRVVQEKIS 316
            +E+   V+ +LP+TVD +   L I+EG  A + V AFC+++M   G AC D+L+  V++KIS
Sbjct:  225 VEEVRKVVATLPVTVDESDINLVIYEGQQAAEAVDAFCKKHMASAGTACMDQLLPHVEKKIS 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig123.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KLN5_9PHAE5.380e-9550.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJ15_ECTSI8.680e-3635.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2BSI7_9STRA3.720e-641.94Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig123contigP-littoralis_Contig123:192153..194933 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig123.38.1mRNA_P-littoralis_Contig123.38.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig123 192041..195398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig123.38.1 ID=prot_P-littoralis_Contig123.38.1|Name=mRNA_P-littoralis_Contig123.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=324bp
MKAAVGLTFGVILSAAPAVIADECHNICAEVKKGISFKAGCTPFRNSLPK
PKVSSKCQSGFKAAIDMNCYDACVNGGHLQPYISEQRLDEVCKGTVNETP
RPLCHDACVRGYRSGVNDMSTSLAKFMDEAAPKILAALQEDTAVRQAAQS
AHDIGPVTSFTTVETDVKPIASTEGVLGTGGREAVKTGAVVPLEHDEILD
ENVGEREEVEGVDEDLPPSVDEIETVEDNAAVAIDGEKKEKKEAGNQDED
IYMWIEDEEMVLLSLPITVDNAQKELTIFEGDDAMDVVQAFCRENMPGEG
AACADELIRVVQEKISPGHAEEH*
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