mRNA_P-littoralis_Contig988.28.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig988.28.1
Unique NamemRNA_P-littoralis_Contig988.28.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 5.470e-52
Identity = 83/102 (81.37%), Postives = 93/102 (91.18%), Query Frame = 2 
Query:   32 LNRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQDGSHK 337
            +NRIDYSEKYVDG++EYRHV+LPKET K+LP+SRLLTE+EWR+LGVQQSRGWQHYAVH PEPHILLFRRPLGT+PVTG VDP LE EAKEKY +EL DG  K
Sbjct:    1 MNRIDYSEKYVDGSFEYRHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102
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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA)

HSP 1 Score: 159 bits (402), Expect = 2.910e-43
Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 2 
Query:   26 MNLNRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKEL 319
            M+  +I+YSEKY DG YEYRHV+LPK++ + LPK+R LTE EWRN+GVQQSRGW+HYA H+PEPHILLFRRPLGTDPV+G VDP LE EA+EKY +EL
Sbjct:    1 MSTKQIEYSEKYQDGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQEL 98
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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA)

HSP 1 Score: 160 bits (404), Expect = 3.280e-43
Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = 2 
Query:   17 PSEMNLNRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQ 322
            P  M + RI+YSEKY D  YEYRHV+LPKE  K LPK+RLL+E EWR +GVQQSRGW HYA+HRPEPHILLFRRPLGTDPVTG +DP LE EAK+ Y   L+
Sbjct:   15 PHSMAVARIEYSEKYQDDKYEYRHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLE 116
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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 1.950e-42
Identity = 71/96 (73.96%), Postives = 82/96 (85.42%), Query Frame = 2 
Query:   38 RIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQD 325
            RI+YSEKY D ++EYRHV+LPK+  K LPKSR+LTE EWR LGVQQSRGW HYA+HRPEPHILLF+RPLGTDPV+G VDP LE EAK+ Y +EL D
Sbjct:    4 RIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELAD 99
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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.950e-42
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 2 
Query:   35 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKEL 319
            +RI+YSEKY+D  +EYRHV+LPKE  + LPK RLLTE+EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGTDPVTG V+  LE EAKEKY + +
Sbjct:    3 SRIEYSEKYMDDNHEYRHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESM 97
[Close]
BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA)

HSP 1 Score: 154 bits (389), Expect = 3.750e-41
Identity = 71/101 (70.30%), Postives = 80/101 (79.21%), Query Frame = 2 
Query:   35 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQDGSHK 337
            +RI+YSEKY D A+EYRHV+LPKE  K LPK+RLL E EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGTDPVTG VD  LE +AK+ Y   L     K
Sbjct:   22 SRIEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLAVNQRK 122
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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A7S1UE56_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE56_9STRA)

HSP 1 Score: 154 bits (388), Expect = 7.830e-41
Identity = 68/97 (70.10%), Postives = 81/97 (83.51%), Query Frame = 2 
Query:   35 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQD 325
            +RI+YSEKY D  +EYRHV+LPKE  K +PK+R+L E EWRNLGVQQSRGW+HYA+HRPEPHILLFRRPLGTDP TG VD  L+ EAKE Y + L++
Sbjct:   36 SRIEYSEKYNDEDFEYRHVILPKELAKSIPKTRILAEQEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDADLQREAKESYLRTLRE 132
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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.120e-40
Identity = 67/95 (70.53%), Postives = 80/95 (84.21%), Query Frame = 2 
Query:   35 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKEL 319
            +RI+YSEKY D A EYRHV+LPK+  K LPK+RLL+E+EWR +GVQQSRGW HYA+HRPEPHILLFRRPLGTDP +G VDP LE EA+E+Y  + 
Sbjct:    5 SRIEYSEKYADTANEYRHVILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEYKNQF 99
[Close]
BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A7S0UH58_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UH58_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.920e-40
Identity = 67/96 (69.79%), Postives = 81/96 (84.38%), Query Frame = 2 
Query:   35 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQ 322
            +RI+YSEKY D   EYRHV+LPKE  K LPKSRLL+E+EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGTDP +G VDP +E +A+++Y  + Q
Sbjct:   35 SRIEYSEKYADDLNEYRHVILPKELAKTLPKSRLLSESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPEMERKARDEYRSQYQ 130
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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A1Z5K5B7_FISSO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5B7_FISSO)

HSP 1 Score: 150 bits (380), Expect = 4.050e-40
Identity = 68/95 (71.58%), Postives = 79/95 (83.16%), Query Frame = 2 
Query:   35 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKEL 319
            +RI+YSEKY D   EYRHV+LPKE  K LPKSRLLTE+EWR++GVQQSRGWQHYA+HRPEPHILLFRRPLGTDP +G VDP L   A+E+Y  + 
Sbjct:    5 SRIEYSEKYADEVNEYRHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELLKAAREEYKDQF 99
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2I6_9PHAE5.470e-5281.37Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7S3MEH0_9STRA2.910e-4372.45Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A7S2BBH9_9STRA3.280e-4370.59Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
D7G7T5_ECTSI1.950e-4273.96Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
W7T145_9STRA2.950e-4273.68Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7S2BWV6_9STRA3.750e-4170.30Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A7S1UE56_9STRA7.830e-4170.10Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A6S9ANL1_9STRA1.120e-4070.53Cyclin-dependent kinases regulatory subunit n=2 Ta... [more]
A0A7S0UH58_9STRA1.920e-4069.79Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]
A0A1Z5K5B7_FISSO4.050e-4071.58Cyclin-dependent kinases regulatory subunit n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig988contigP-littoralis_Contig988:69624..81787 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMM5
PFAMsCKS
Model size1720
Max annot lvl2759|Eukaryota
KEGG koko:K02219
KEGG Pathwayko04111,ko05200,ko05222,map04111,map05200,map05222
Hectar predicted targeting categoryother localisation
Exons4
Evalue7.01e-59
EggNOG OGsKOG3484@1|root,KOG3484@2759|Eukaryota
Ec32 ortholog descriptionCyclin-dependent kinase, regulatory subunit
Ec32 orthologEc-06_003970.1
Descriptioncyclin-dependent protein serine/threonine kinase activator activity
Cds size315
COG categoryD
BRITEko00000,ko00001
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig988.28.1prot_P-littoralis_Contig988.28.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig988 69649..79713 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791908.1888168-UTR-P-littoralis_Contig988:69623..696481680791908.1888168-UTR-P-littoralis_Contig988:69623..69648Pylaiella littoralis U1_48UTRP-littoralis_Contig988 69624..69648 +
1680791908.2606015-UTR-P-littoralis_Contig988:79713..797271680791908.2606015-UTR-P-littoralis_Contig988:79713..79727Pylaiella littoralis U1_48UTRP-littoralis_Contig988 79714..79727 +
1680791908.2714558-UTR-P-littoralis_Contig988:80421..817871680791908.2714558-UTR-P-littoralis_Contig988:80421..81787Pylaiella littoralis U1_48UTRP-littoralis_Contig988 80422..81787 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791908.2088609-CDS-P-littoralis_Contig988:69648..697071680791908.2088609-CDS-P-littoralis_Contig988:69648..69707Pylaiella littoralis U1_48CDSP-littoralis_Contig988 69649..69707 +
1680791908.2200747-CDS-P-littoralis_Contig988:77868..779911680791908.2200747-CDS-P-littoralis_Contig988:77868..77991Pylaiella littoralis U1_48CDSP-littoralis_Contig988 77869..77991 +
1680791908.2391906-CDS-P-littoralis_Contig988:79580..797131680791908.2391906-CDS-P-littoralis_Contig988:79580..79713Pylaiella littoralis U1_48CDSP-littoralis_Contig988 79581..79713 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig988.28.1

>prot_P-littoralis_Contig988.28.1 ID=prot_P-littoralis_Contig988.28.1|Name=mRNA_P-littoralis_Contig988.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=105bp
MNLNRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQ
SRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQD
GSHK*
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mRNA from alignment at P-littoralis_Contig988:69624..81787+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig988.28.1 ID=mRNA_P-littoralis_Contig988.28.1|Name=mRNA_P-littoralis_Contig988.28.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=12164bp|location=Sequence derived from alignment at P-littoralis_Contig988:69624..81787+ (Pylaiella littoralis U1_48)
CTGTATAGCGCTTTCTCCCTCCGAGATGAACCTGAACAGGATCGACTACT
CGGAAAAATACGTGGACGGTGCTTACGAATATCGGTAAGAGAGGACATTT
CTTGTTAACAGAAGCAGGCGGAAGGGAAGGAAATGAGAGGTTGATGTCAG
AGGAGCGGGACCCGTTAGTTGGTCGATTTCCGTGCACGAGATACAAGAAT
GATCTGATGTCCTGTGTGAAGTATGATATGTACGATGAAGAGGTTTTAGA
AGATTTCTTTTTGGCGCTCGCTCTGACGAACAAACAACAACCTGCCGGCA
GGGCGTGTCCTCACTGTTGCTGCTTGCTGTAGATTGCTGGGGATGCACTC
CTGTGGGTCCGGTCTAAGGGTGTCGTTGTTTGCTCCGTAATTTGGTGTTG
CAACACACACGCACAACAACAACAACAACAACAACAACAACAACAACACC
GCAGTTCGGCACTACAGCAGTACACACACCCGCTCTTTTCTGGCGAACAT
CGTCGTCTCAGACACGACAGCGAACTCTCGAACACTTCGCATACAGCATT
ATCTACAAAGATATGCGTGGACCTTTGTCCAGCACCAGCAGCAGCCGTAG
CAAGCAGCTGGCTTCGCGTGCGGCACTCACTTCGCACTTTTTTCTCCATG
GACAAATTAGGAAAGAGCATCCAATCCTCTTTAGAGTCTGTGGCGGCGAG
CACAGCAGTGGAAGAGGAAGATGCTTTTTGGGTTCAGTCCAGTTTGCGAA
TTTGTAGCCACTACTGCGGGCTTCGATATTTAAGCCCTTGCAGCAGATCT
GAGCGTCTCAATACACACATCGCTGCTGCAGAGTGTCTTCTACTGATATC
GCCTTTAACTCTTTGAACCCCTCAATCCCAATTAGGGACAATTTGGGGAC
ACCTGTTTTTTTTTTGTGACTTGGGTTTGGAAGGCGCCTATCTACAGGTA
TTTTGGGTGTGGTTCCGTGCGCTCGATGGAATGTGTTGTTGTTGTTGTTG
ATTCTCACATTAGCTCACTACCGCCGCAGTCTAGCCCGTGGTCACAAACC
AGGCACACATCATGCTAGGAGGAAAAAAATAAATGAAATATATGGACTAT
GATCACCCACAGCAGTCAAATCAGATATGGTACCGTTGGGGTACCATGTG
TGGTGGCCAGAGTACCAAACAAAATACAGAAAAAAATAACAGGCTCGAAA
GAAAAAACAAAAATTGGAAACAGTCCGACAAACAAAAATTAACAAAGACA
AACCTCAACCATAACCATACTTGTATACTTCGAAGTACTTCGTACATCTA
ACCAGGGCCCAGGGCCATGACAGACCAAGGCAAAGGCAAACCAGGGCGAC
GTCCAGTAACTATATGATCAATAGACGAAAGACAAGAAAAAAAGAAGATA
CAGGGAGGGCACAAAGCTGAGGGAGTGCACTCGTGCACAAATACGACAAA
ACAGGCCGCCAAAGAAAGATGAAGAAGGGGAACGGAAAAGGGAAAAGGAA
AGAAGAGACAAAGAGGAACAAAATACATGAAGTACTGGAAGTGCAGAGGG
AAGACTGGAAGTGAGTACCGGAAGTCGGGGAGGGGGGGGGGGGAGGTGAC
AAAATAAAAACAAAAGGCATGCAATCAATCGCAAACATGTCTTGCCACGA
GGTCCGCCTGTTCACGCTTGCTCTCCTCAGTCGCACTCATGCCTCCTGCT
ACTGGCACCACCATACCCAGTTGTTTCTGCCCCACATCTTTGGCAGCAGC
TACACCACCATTCCGCCCTACAGGTTTTCCACTCCGGCCACCCCGTAGCT
TGGCTTTGGACTGCTTCTTCTTGTGCTGTGCAACTCCAACCCCACTACCC
CGCTGCCCTTGTGCCCCCCCGTACCCCTCCTCTCGTTTATTCCCGCCATC
CGTTCTCCCTCTTTTCGCCAAGGCCTGCCCCTCAGCCGCGTCCCTCTCCC
TTTTCCGTCCACGTGTCTCTGATAAGCCTCCCTCTTTCTTGAGCCACTCG
TCCGTGAACCGCCGCGCACCTTCGTCGATCCTGTCGTACCACTCGTCAGC
TCTCTTGGCACTTGCCTCCCACCCCCCTTTTTTGTCGACCACGATGTCGA
ACGCTTCGAGGTCCTCCTGCATTCGCCTCAGCCAGTCAAACTCTTGCCCC
CCCAGATACCTCGCTCCCCCCTGCAATTCTCCCAAAAGAGCAATTTTCGG
GAGTCTCTCGTCTCTCATGCGCGCAACGAATCCTGCGAAGCACAGTCGCC
GCTTGCGCACGGTGGCCTCAACGCTCTCGTCGCCACCCGCGGTGATCAGG
ACTTTGGCGTAGGAGAGGGGTCGGTCTGTTCTCTCCCTCTTTTTCCATCC
GATGCAGCGAAGGAGGAAGAAGTGGTGGGCTGACCGAAGCTTGCGGTACT
CCGCTGGCTTCAGATTCCATGTGACACACCCGTAGAGTAGGGTCTCCACG
ACTTCAGCTTGGAGGAGTCGTACTTTTAGTCGAAGAGGGGCCCCCGGGCG
GTCGTACATTGCCTGGCTGTTGCGCCGGAAGCAGGCGTGCGCTCGCTGCA
CTCGGTGGTTAATCTCGCCCTCAATGCTACCGTCCTCACAAATCTTACCC
CCGAGATAAACGAAGTCTTTCTTCTGCTTGAAGACCATCCCGGCAGCGTC
GATCGTGAACGAGCACGCCTCCATCCCTTTCGCGAGCATACACATGGTCT
CCGTCTTGGGTTCTGACACCAACAGCCCAAACCACCCGGCCACACGTACG
ATGATCGACATCATCTTCTCAAGGCTCCCAGGTGATTGAGATACAATACA
GGCGTCGTCGGCGTAGAGCATACTCCAGATGGACCTCACTGCCTCCACCA
GTCGGGCGTTCCTCCCCTTCCCCTTCGTCACCTTCCTCTTGACCGTGGCC
ATGTCCGCCATCACCTCCGCGTCCTTGCTGATCTCGGCAAAGGCCACCAT
GAGCATCGCAGCAAAGAAAAGGTTGAACAGCAGGGGTGCCAGATTGCATC
CCTGTCGGAGTCCCTGCCCCACGTCAAGCCAGTCGGGCACCTCCCGTCGT
CCATCCGTACGCATGCTCTCACTCCGTCGTGGAATTGGCGAATGACCGCA
TGCATCTTGGGGGGCACTCCGAGCCGCTTGAGCACCGACCACAGTAGTTC
CCGGTCTACGGAGTCGTAGGCTTTCGTGAGATCGATAAAGCAGGTGTACA
GTGGGGTTGACTTCTTCCGCGCAAGCTTGTGTAGGCGTCGAACCACGAAC
ATCGTGTCAACCGTGTGGATCGACCAATCGTTGGCTGCCTCGGTGCCACA
TTTAGTTTTTTATTATTACTATGGGAGGGCAAGCGCGCCCGACCGTTATA
GGTTTGTTGTGTGTTACTGTGTCTTCCCTTTACAGCGTAGACACAACTAA
CTACGATCGTCTTGCATCACACACCATGCCAGCACCCCTCCCTGCCTTGC
ACACATACACACAAACATAATACGGAGTACATGATACATATGTTAAGACT
AAACCGCTGCGATGAAACGCTGATTGACGATGACGTTCTGCTGCTGCACT
TAAAACACGTACACCCTGATTTCTGGGACTGACTGCTGTTGTGCATGCTG
CAGCAGCTGATTGATGTGTCGTGCGATTGGTTGGTGAGACACACACCACG
CGCACGCGGGCCGACACTACAAACAGACACATCGTGCAATGCACGTTTGA
AAGCTCACACACATACCCGACGATCTCGTACGGGTATCATCACATGGGCA
CCATCACATGACGATGCCCTTGCGTTGATCATGCAACATGTGAAATATGT
GTTTGTCATGGGACTGCTGTATCGTAGTGAAGCTGCTGCTGCTGCTGATG
ATGACGATGCTGTAGACCCTGAGCGAATGTCGTGCGCGGGTATAACCTTG
CGGAGTGGAACCCTACTGCTGTGTGGTTGTCGAGCGGGGTACCCTGATCT
ACCATGCTAAGTGGCGGTGTTGCTGCTTGCGTGCTACTTCCATACAGCAG
TATCCCTTTGTTTGAAGCAACATCCTGTAAAGCTAAACAACTTTTGTGTA
GGTGACCCCCCAAAAAAGATTGGTGTAGCTTTAGACTGGAATCTGTCCCC
ATTTTTTTCGGGGCAAATTGGGGAGAGATATCTGTGTATAACCAAGTCAC
ACCCTTTTTTCACCGGACAGCGCCAGCGAGACGTCAGTCCGTTTTTTTCC
ATGAGACTGTCCACCATTCGCCAATCATCGGCGCACCGGAATCAGTTAAT
TTTTGGCTCCATGATTATTTTTTTCAGACTCCTGGGGGGTCAAAGGGTTA
AGATTGGGACTCCTCCGGCGGGAAACCTTATTTGAGCCCAAGCCTTATTG
GCTGTTTTGTCTTGATGTTAGACGGGTGGGATGTTTTGTCTTGGTTTTAG
AGGGGGATATTGGATATATAGAATCGTCATATGCGTGTCATTGTGAAGAA
ATGCCTCTAGCGCCGCTCTGTGCGATAATCAACGATCTTTTTCTTGCATG
ACACCTTCCTACTGGTGTGAGGTACCCAGTGTCTGATGATTGCTGAGTGC
GTCGCAAGTTTTCAAAATCGGTCAATTCAAAAACAGGTTGGCAGCGGAAC
CTAATCCGGTCTCCGTGGAAAAACATAAGGGTTCACTAGCTTCGCTTTCT
CCCATACATACGAAGGTCTACAGGTGGTTCAGTTGATTATCCTCCAAATC
TTCCGACACTCACGCTTGAGTTCGAATCCCGGTGCAGTACCACGATCCGG
AATTCTTCTTATGTCATGCGTGAGGGTGGAAAACGATTAATTCGTGAGTC
AACAAAAATTGAAGGGTCCACGAGGGAAAGGGATGGCTGTACCCTTTCTC
GCGAGAAAAAATGAAGGCAAGTACCGCAGTGGGAAATGGAGAAAGAAAAG
AAAAGAAATAAAAGAAAAAAACCCTTTTGTGTTGACTTCCTACTGTGTGA
CCCCGGTTGGAGGTCTACCTACCGAAAGGTGTAGAGTGGCGCCCAATTAA
AGGGATGACAACACACACATACACACACACGTTAACCATCTCGCACATCA
AAACAGACGTGTCCGGAAACCGCGGAATAACACCCATCCATGCCGAATTT
TGGAAGAGGAACGAACAAACCGTGGTGTGTGCGGCTGACGATCGACCATC
AAGCATTTGTGGTGTGGTTTTCCCACAGTTTCCGCGAGATTCAGAGTGCT
TCCGCGCTCATGACAGGCGAGTTTGCGAGTTTTTCGGTTTTCTTCGGCTA
TTACCGGAGCCGGTTTTTGTCTAAAAATCGAAAAATCAAATAACATCAAA
GAAATATTTTTTGTTGTTCATTGCTCCGCAGCGCCAAATTTAGAAACCTC
TTGGCACGCGCGGCGCGCCAGCGCGCCCCCCTTTTTGTGGGGCAGTTTCA
GCAACATCTCGACGAGAGATGTTGGACTCGGTTTTTATCCCGCATTCTTG
CCTTTTTGGATAGCCAAGTAAGCTCAGCTTACTTGGCTATCATTCTTGCC
TTTTTGGATAGCCAAGTAAGCTGAGCTTGTGTGTTTTCTGCACCTACAAC
ATTTGGTGATCCGTAGAATTGAAACAGACTTGTTGCCAATACTTGAATAT
TTGAATAATGGCACAATTCTTCTGTGTGCTGTCGTCCCCGAATATTGCAC
GTGGAATATTTTCTGTCGAGATTAAGATTGTGAGCACAATGCCATCAAAA
TACAAACTAAACGAAAGGGATAGTATCATGGTTTGCACGTTGACCACACA
ACAGGGCCGCGCGGTTTTTACTCTTGTCACAACAATCAATGTCCCCAAGT
ATCAATCTCACGAGAAATGGGAACACATTTCGAAATGGGAACGGACAGCC
GCCGTTTTGCATGATTTCAAGTCGGAGAATCAATTTACTTTGAAGGCCCC
GTGGGGACGGGGGGGAGACGTATGATATTACGGCCATTCGTTGGGATACT
GCTCCGTGTTTGTGGGGGGTGGGAATTGCACCATGTGGGGGGTGGAGCGT
GGGGGGTAGGGGGGGGGATGGGGGTAGCCCTTGGGATAGATACACGTACA
TGTAGATACCCTCCGAAGGTGCCTTCGAAAGGGTCTAGATTTCGAATCGA
AAACATGCAAAGCGGTTCCTGCCCGCCGTTTCGATTTCAAAATCCTTCCC
CATCTTTCAATTTTTGGCTTCGGTCGCCCCGGTGGTTCAGTCGTAGCCCC
GAAAACTACTCACATCCAGGACGTGCGGTGGAATCCCGGTGAACTCGCAC
GATATCCGATTTTTTTCCCAATAGTCCTAGGGAGCGGAAAACGAATACGA
AGTTATGTCGAGTAAACAAGCACACTCCGGCCTCAACAGTTGACGAGGGC
AAGGCATGGTTGAACCCCTCGCGATAAAAAGCCGAAAGGCTACAAAGACA
AGCAGCGCAGAATGTGGGTGGAGAGAAAAAAAAATTGTGTCTCCTTCCTT
CTTCAATCTATGTGACTCCGGCTGGTGCACCCACTTCATACCGAAAAGTG
TAGATAGACTGGTGCCCAGATTAAACGGGACAACAAACACACACACACAC
ACACACACACATGTCGTTCGAAGAAAAAAAGTAAAAAGATGACCGAAAAT
CGATTTGAGGTTGCATGCTTATCATTCCGCTCTCTCATTTTACGGCATAC
AAGGCCCGCTTGACATCGCCCTTGGTGGTACGTGTACGTACCGTCGGAAG
TTCGGCTTGCGACTTCGATGGAAAGTCCATGCATCGCTACTGCTGGTAAT
TTTGTCGTCGATGACGGGTACCCCTTTTCATCGCACGTGGTTGATGATTT
TGCCAGCCGATAGAGTTGATGGCCAATTGCTGCAAGCCTTGGCCATGTTT
TCTACTTTCCATTTTGTTTTTTGGTCCGGGTGATGTCGAAAGGAATTTCG
GCCAATCACGCTGTGTGCAGACGACGGCCTCCCTTTGGCAGACCATTTGA
TCTTCTGGATTATTCTTTGTTTTTCAGAATGAAAGGAATCTGGAATCAAA
CATTCGTTTGATTGCAGTCACGGGGCCAGCTCGGGAAACCCCCGACAAAG
TCCGTTTAGAATGCACCCTTTTGCGCAACCACCCTTCTCATGGGGCTACA
ACACTGCTTCGTTTTCAGGGTTTCAGAAATCATTCAAAGCGCGATATTGC
GACCATGGCTGACGTCACTCACCACCGGACGGGACAGGGATTTTTTTTTG
GCCATTCAGAATACAGCTGTACCAACGTTGACCGATAGGAAAACTGCGGG
CGCGAGCAAGTAGTGACTGTTTCCCTACGCCACGCAAGCAGTGACGCAAA
TGGGCCGGCCGCAAGTCCCTGGCTGCTGTAGTATTGAGTGCGAGAAACCC
ACCGTGTTTGGTGGAGGCGGGGACGTGGGCGTTGTACCTAGACGCGACAG
CACAGACAGCTCCCGTAGCTCAATTGTGTCATGCGCATTACCAGAGGTGT
CATCCGATGTGAAAATATTTCCACGTTTGAAACGCTCAACAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAGCGGTAC
ATTACTTACTGCGTGTTTTCATCGCAGAGTTTTCGATTATTCCAGCTGGG
TTATCCATGCATTTACTTGTATTGTGTGTTTCCCTATCTGCCGGTCCTCT
CGCTCATTCACACAACAGCAGCAATTGCTCGAAAACACAGAAACATACAC
AAACTGTTTTGTTCCGCGCAATGCCCACTCTCCTTTGCGAGCCTAAAGTT
CAACATCGCCTCCCGTGTGGGGCTTGCTCTGTGAGGCACTCAACGCAAAG
TAACAGCAAATCCGCCCCAAAGCAACCAAATCCTCGCCCTTCTTGCTCCA
CCTTGTATCATAAACCATGCAGTGACACATCGCGCCCTTGGTCTAGGGTT
ACTACGCTGTGGTTGCCTGCGTCTTGTCACAAGATTTACTCTAAGTTGGG
ATGTATGTTTGAACTCATGTTTGTACATACTTGAAAATTATGTGTACATC
AGACGGTTTTTAGTTATTCTTGGGAATACGTGTGAATGAAAGCATGCATG
GATGAATGAATACATGTTTTGCTCGGGGACATTCATAAGTCGAACCAACT
GACGAAATAAATAACGAGCGTCACTTTGTTTGTTTTGCGTTTTGGTGGAA
CGAAGTATGATCTTGGTTTTGGTTTTGGGGAAAACAAATGACAAATGAAA
GATGTGTGTGTGTCTGTTTGCCCGGTTGGTTTCGTTTTTACGCAGGCATG
TCATGCTGCCAAAAGAAACGGTCAAGGTGTTGCCGAAGTCCCGCCTTCTG
ACCGAGAACGAGTGGAGGAACCTGGGCGTGCAGCAGAGCCGTGGCTGGCA
ACACTACGCCGTTCACCGGTGAGAGAGCGAGCGAGCGAGCTACGATAGCT
AGCGAAGAGCTCTTTTTAGCCGCCTCCCCTCCCCTCGCCTCGCTTCACCT
CACTCGACGTCACCTCGCCACCACTAGCACAGACTCCGCTGCCCCTGCAA
CGCCACCCCTACCACAGACTCTGCTGGTGTTACCCCCCCCCCTACAAAGC
AAACGAGGGAAACAACACGCATCTTTTTCAGGGCCGGCGAAAGTGTGCCT
GCCTGCAAATACTTTGTCTGTGTTTTTCCAGTGATGGTCATCGTCAATCA
TCATCGCTAGGTAGGTACGCACGCGCCCACCCAGTGATTTGCTGCTGCGG
TAGTTTGCTTGGTATCCAAGAGATTTTCATCATTCGAGTTCTCTCGCTTC
TGTTGTACCTGCTGTTAGGGTTTGGGTGCTGGAGGCATGTAGCAGGGACT
TTTGTTGTGGTAAATACACGCCTATGGACTGAACTGGTTTTGGCTTGTTT
TGCTTCGAAACCCTAGATGCATACCTGGCACGCAGACACCAAAAACGCCG
ACACAGGCCAAGTGTAAGGGTTCTTGAGGGTGTGCTCTAAAGACCGAGCT
CGTCCTGGTCACGATACTGTATCGCCGCAAGCAAGAAACGAGCACGCACG
CACGCACGCACGCATGCCAGAGCACCAAAATCATCCCCTGTGCGCCGTGA
ATAGACACGCGCAGGCAGGTCGGGGCTGTGCGGCCCAACAGGGCGGCAGG
ACTCTGAAAGCCAGCATTCTACATGAGCCCGTTACCATAAGAAGTATCGC
ATGTGCACGAAAAAGCGCGTTTATCTAGCGTGCGTCGCGGGGGGAATAGA
CCCCATTCATTCGGCGACGACACTAGAGCGCGCAACAACCTCTCACAACA
TGAGAGAAGAAAAAACGATTGATTTTTACCAAGTACTCCGGCGGTGTGGG
CCCGCGTCAGAAGACCGCGGCTCATTTCTTGGAACGCCGGCATCATGTCG
TCAAACAAACGCGGTCAACAACACACGCACGCACGCACGCACGCACCGCT
GACGGCAACACACTTACACGCCCCGAGAAAGCGAGACCCACGGTATGATG
TCAGGACCCCGTCCAATCCAACAGGTGGCAGGCAGGCAGGCAGGCAGGCA
GGCAGGCAGGCAAGAAAAAACAGAAATTGGCCGGACGGGGGAGAGGGTGC
TCAGGGCGTATTTACCCTCTTTTACCTTTCGCAAGTAGTTCTGAGGATTT
GCGTGTCTGCGAACGACAGCCGGGCGTTGCGGGCACTTACTTCTCGCGTA
TCATATACTGCCGTGGGGATGTTGTCTGTGCTCATGGCGGCCCCGAGGGG
TGTGGATAGAGTTTGGAAGTGAATTAATTACCCGCGAGAAGTCTGCCTCC
TTGTCTGCGGAGTTCTTGCACGCAAGTACTGCGCGTACCACCCCATCGCT
CTCCACCCCCCCACCCCCTCTCTCTATCTCTCTCTCTCTCTCTGTCTGTC
TCCCTCTCGCGCGCACTCTGCCCTTCTGCCTTTTTTTTGTTTTTAAGGTT
TTTCTGTTTTATCCATCTTTTCCCTCCCTCCCCACCTCTTTCCCACATTT
TTTACAGTCCGGAACCTCACATCCTGCTCTTCCGGAGGCCCCTTGGCACC
GACCCCGTTACGGGGATGGTTGACCCGGGGCTGGAGCTAGAGGCGAAAGA
AAAGTACACCAAGGAGCTTCAAGACGGCAGCCACAAGTAAACCTAATGTG
AAGGGTGAGGAGTGAGAGGGGGGGATTAGGTAAATGCATTTACCATCTCG
GCGTTGTCTAGACCAAAAGACTTACCAGGTACTGTTCATGGGGGGAGTTT
GCATGGTCAATGCGCAACGAGGAATATGCAGAATGTGGAAGTTTTTTTTG
TTGACAAAACTTTTCCTTATTGATACCGGTGTGTAGTTATTGGCAACGCA
ACCGACGTTTTGGTCGGCGTTGTGGCAACCAGCTAGCTGATCCTTTCTGC
GTGGAGTTTTACCAGGTGTTGTATTTCCCAGGGTTGAAGGGGGGGGCGGA
GTCAGCCAAAAATCGCAAGGCGACGTGTATGTGTTGACCCCGGTGACTTG
AGAGGGAAGAAAGAGGCGAGCCGCCAAACAGCGATGCAAAAGCAACAGCA
TGGCAATGTTATGTGTCGATGACCGGATGTTGTGCATCTATGTATCCCTT
ACCAGCGGCTTTCTGGCTGACTACATCGCTAGAGTTGGTTGCGTCCTTGT
CCCGGCCCGTCGGCTTGGCGTGTGTCTGCCACGCTTTTAGGAGTACGTTC
GAACTTCGTCATGCCAGCGGCAGCGGCATCTGTAGCAGAAGCAGAAGCAG
CAGCAGCAGCAGCGGAGAAAGACATCACGTGCCGGCAGTTTTCCTTTTGG
GTAACATTGGTGCCGCTGATTTTCTAATGCCGCCTTTCTCGCTTGCAGCA
CCTGTTGTCGGAGAGAGAAACGTGTGGGGGAGGGGGTTACGCCGCGCTTG
CCGTGCGCGTGCGTGTTGCTGGAGAGGTGCGCATGTTTCCCCTTCTTGGC
GTTCGTCAGCAACGTTCAACGGCAGTAGCAGCCGGGTGAATCGAACGAGT
TGGTGGAGGGCGCGGTGATTTAGCACGAACTCAATTCACCAGAGGGACAC
AGAAACGTCCTGTGGCGGTGGGTGGAGTAAATCACAATTTTTTGTGTGTG
GTGTGCGGCGGGCCTCACAGGTTCGCGCCTTTGTTTTTGTTTTTGCGACC
ACCACGTAGACCCTCCCCCCTCATAAAACTCGATTTATTGTCTGTGTGCG
TATGTTGGTGGCTGTGCGAATTGTTGGTTTGGTGGCCGGCCGTGTCTCAG
TGGTGTTGCGCGTGATCTTTTGCGTTCCCCCTCCCCCGCGTGTGCACGCC
AAACGCTACGTATCACAGTGCCTCCAAGAGAGGGACAAACTGCGTTACCT
CCTGATGCACGCCTGCTCTTTGATGTTGTTGCGTTCGTAGATCACGGCCT
GACTTTAGGATTAAGATTGGTGTATGATATGTGTTGGTATATACCTCGAA
GTATTGATCAGTCGGTGTACTTCGTCTTTTCTTTTTTTTATGTTTTTGGT
GTTAATTTTGTAGCTCATCTAGATGATATTTATGTTCATCATGGGTTCGG
TTGTTCTGGTGTTTTTGTTTTCGATGGGGCGTGATTCATTTTTTGTAATT
GTTTTTGTTACAGGAGAAGACGATAAAAAAGTTGGCGTCGGTCTAACATG
ATGGCGGTTTTCAGCTTTAGGGATTGCGTGCCCAGCTTGTGGTGCACAAA
TATACACCCCGTCCTTTGTGGGCTTTTGTTACTGTCACGGACTGGCTAAT
GCATTCAGTCGGTGTACGCGCGCGTTATTGGGTGTCGTTGTCCCGTTCAA
GTGTGCAGAAATTCTGTTTCTTGCCGGTGGCGCAGCGCGGCTCCTTCTAT
CTTCGACCGCCGCCCGCCTTCTGATCGTAGCACCGAAAGGGTGTAGACCG
GCGTCCGGAAAACGAAGTTGAGTGTTTCCTGCGACCCGCATAAAAGAAAC
GTCAATTATTTGGGGTCGAGACTCACTCGCTTTGGGAGCAAACATCACCG
TAAGTTTTAAGTACGACCCATGATGAATAACCCGATGTCTACGTTGGGTG
AGAGTACTCGTAGGATAGTACCTGGCGAGAGCCAAGATTTTTCTCACCTT
CACAATCTTTTTTTCCTCATGGCTGAGTAAGGCTGACGGATCAGGCTGTT
TTTTTTTTACATTTTCTGGGCTTCAGTATTGTTCTTCAAGTTTATGGTAT
CGTCTCCTAATTTC
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Coding sequence (CDS) from alignment at P-littoralis_Contig988:69624..81787+

>mRNA_P-littoralis_Contig988.28.1 ID=mRNA_P-littoralis_Contig988.28.1|Name=mRNA_P-littoralis_Contig988.28.1|organism=Pylaiella littoralis U1_48|type=CDS|length=315bp|location=Sequence derived from alignment at P-littoralis_Contig988:69624..81787+ (Pylaiella littoralis U1_48)
ATGAACCTGAACAGGATCGACTACTCGGAAAAATACGTGGACGGTGCTTA
CGAATATCGGCATGTCATGCTGCCAAAAGAAACGGTCAAGGTGTTGCCGA
AGTCCCGCCTTCTGACCGAGAACGAGTGGAGGAACCTGGGCGTGCAGCAG
AGCCGTGGCTGGCAACACTACGCCGTTCACCGTCCGGAACCTCACATCCT
GCTCTTCCGGAGGCCCCTTGGCACCGACCCCGTTACGGGGATGGTTGACC
CGGGGCTGGAGCTAGAGGCGAAAGAAAAGTACACCAAGGAGCTTCAAGAC
GGCAGCCACAAGTAA
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