prot_P-littoralis_Contig988.28.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig988.28.1
Unique Name	prot_P-littoralis_Contig988.28.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	105

Homology

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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.310e-57
Identity = 83/102 (81.37%), Postives = 93/102 (91.18%), Query Frame = 0

Query:    3 LNRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQDGSHK 104
            +NRIDYSEKYVDG++EYRHV+LPKET K+LP+SRLLTE+EWR+LGVQQSRGWQHYAVH PEPHILLFRRPLGT+PVTG VDP LE EAKEKY +EL DG  K
Sbjct:    1 MNRIDYSEKYVDGSFEYRHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSDGIRK 102

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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA)

HSP 1 Score: 159 bits (402), Expect = 9.720e-49
Identity = 71/98 (72.45%), Postives = 85/98 (86.73%), Query Frame = 0

Query:    1 MNLNRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKEL 98
            M+  +I+YSEKY DG YEYRHV+LPK++ + LPK+R LTE EWRN+GVQQSRGW+HYA H+PEPHILLFRRPLGTDPV+G VDP LE EA+EKY +EL
Sbjct:    1 MSTKQIEYSEKYQDGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQEL 98

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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA)

HSP 1 Score: 157 bits (398), Expect = 8.620e-48
Identity = 71/99 (71.72%), Postives = 81/99 (81.82%), Query Frame = 0

Query:    1 MNLNRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQ 99
            M + RI+YSEKY D  YEYRHV+LPKE  K LPK+RLL+E EWR +GVQQSRGW HYA+HRPEPHILLFRRPLGTDPVTG +DP LE EAK+ Y   L+
Sbjct:   18 MAVARIEYSEKYQDDKYEYRHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLE 116

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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.020e-47
Identity = 71/96 (73.96%), Postives = 82/96 (85.42%), Query Frame = 0

Query:    5 RIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQD 100
            RI+YSEKY D ++EYRHV+LPK+  K LPKSR+LTE EWR LGVQQSRGW HYA+HRPEPHILLF+RPLGTDPV+G VDP LE EAK+ Y +EL D
Sbjct:    4 RIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELAD 99

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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.610e-47
Identity = 70/95 (73.68%), Postives = 82/95 (86.32%), Query Frame = 0

Query:    4 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKEL 98
            +RI+YSEKY+D  +EYRHV+LPKE  + LPK RLLTE+EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGTDPVTG V+  LE EAKEKY + +
Sbjct:    3 SRIEYSEKYMDDNHEYRHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESM 97

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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.280e-46
Identity = 70/95 (73.68%), Postives = 79/95 (83.16%), Query Frame = 0

Query:    4 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKEL 98
            +RI+YSEKY D A+EYRHV+LPKE  K LPK+RLL E EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGTDPVTG VD  LE +AK+ Y   L
Sbjct:   22 SRIEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASL 116

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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A7S1UE56_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE56_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.920e-46
Identity = 68/97 (70.10%), Postives = 81/97 (83.51%), Query Frame = 0

Query:    4 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQD 100
            +RI+YSEKY D  +EYRHV+LPKE  K +PK+R+L E EWRNLGVQQSRGW+HYA+HRPEPHILLFRRPLGTDP TG VD  L+ EAKE Y + L++
Sbjct:   36 SRIEYSEKYNDEDFEYRHVILPKELAKSIPKTRILAEQEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDADLQREAKESYLRTLRE 132

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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA)

HSP 1 Score: 152 bits (383), Expect = 7.650e-46
Identity = 67/95 (70.53%), Postives = 80/95 (84.21%), Query Frame = 0

Query:    4 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKEL 98
            +RI+YSEKY D A EYRHV+LPK+  K LPK+RLL+E+EWR +GVQQSRGW HYA+HRPEPHILLFRRPLGTDP +G VDP LE EA+E+Y  + 
Sbjct:    5 SRIEYSEKYADTANEYRHVILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEYKNQF 99

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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A7S0UH58_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UH58_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.280e-45
Identity = 67/96 (69.79%), Postives = 81/96 (84.38%), Query Frame = 0

Query:    4 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQ 99
            +RI+YSEKY D   EYRHV+LPKE  K LPKSRLL+E+EWR +GVQQSRGWQHYA+HRPEPHILLFRRPLGTDP +G VDP +E +A+++Y  + Q
Sbjct:   35 SRIEYSEKYADDLNEYRHVILPKELAKTLPKSRLLSESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPEMERKARDEYRSQYQ 130

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BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Match: A0A1Z5K5B7_FISSO (Cyclin-dependent kinases regulatory subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5B7_FISSO)

HSP 1 Score: 150 bits (379), Expect = 3.020e-45
Identity = 68/91 (74.73%), Postives = 78/91 (85.71%), Query Frame = 0

Query:    4 NRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQSRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKY 94
            +RI+YSEKY D   EYRHV+LPKE  K LPKSRLLTE+EWR++GVQQSRGWQHYA+HRPEPHILLFRRPLGTDP +G VDP L   A+E+Y
Sbjct:    5 SRIEYSEKYADEVNEYRHVILPKELAKTLPKSRLLTESEWRSIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPQSGRVDPELLKAAREEY 95

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig988.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L2I6_9PHAE	1.310e-57	81.37	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S3MEH0_9STRA	9.720e-49	72.45	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S2BBH9_9STRA	8.620e-48	71.72	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
D7G7T5_ECTSI	1.020e-47	73.96	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
W7T145_9STRA	1.610e-47	73.68	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S2BWV6_9STRA	3.280e-46	73.68	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S1UE56_9STRA	4.920e-46	70.10	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A6S9ANL1_9STRA	7.650e-46	70.53	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S0UH58_9STRA	1.280e-45	69.79	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A1Z5K5B7_FISSO	3.020e-45	74.73	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000789	Cyclin-dependent kinase, regulatory subunit	PRINTS	PR00296	CYCLINKINASE	coord: 20..34 score: 62.56 coord: 42..56 score: 76.41 coord: 57..71 score: 78.97 coord: 5..19 score: 54.36
IPR000789	Cyclin-dependent kinase, regulatory subunit	SMART	SM01084	CKS_2	coord: 5..74 e-value: 2.8E-42 score: 156.5
IPR000789	Cyclin-dependent kinase, regulatory subunit	PFAM	PF01111	CKS	coord: 6..72 e-value: 3.8E-35 score: 119.9
IPR000789	Cyclin-dependent kinase, regulatory subunit	PROSITE	PS00945	CKS_2	coord: 60..70
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	GENE3D	3.30.170.10		coord: 1..82 e-value: 2.1E-37 score: 129.4
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	SUPERFAMILY	55637	Cell cycle regulatory proteins	coord: 3..78
None	No IPR available	PANTHER	PTHR23415:SF29	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT	coord: 5..77
None	No IPR available	PANTHER	PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	coord: 5..77

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig988	contig	P-littoralis_Contig988:69649..79713 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig988.28.1	mRNA_P-littoralis_Contig988.28.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig988 69624..81787 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig988.28.1 ID=prot_P-littoralis_Contig988.28.1|Name=mRNA_P-littoralis_Contig988.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=105bp
MNLNRIDYSEKYVDGAYEYRHVMLPKETVKVLPKSRLLTENEWRNLGVQQ
SRGWQHYAVHRPEPHILLFRRPLGTDPVTGMVDPGLELEAKEKYTKELQD
GSHK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000789	Cyclin-dep_kinase_reg-sub
IPR036858	Cyclin-dep_kinase_reg-sub_sf