prot_P-littoralis_Contig122.165.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig122.165.1
Unique Nameprot_P-littoralis_Contig122.165.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length89
Homology
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BLAST of mRNA_P-littoralis_Contig122.165.1 vs. uniprot
Match: D7FKI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKI6_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 2.330e-28
Identity = 54/80 (67.50%), Postives = 63/80 (78.75%), Query Frame = 0 
Query:   10 LVILMAMVLHMASAGFE-LAVDSEGDTIRTQDRDPFKEDYFNMVLASFLLMFFFIGCMFSVRICLGKRRGNDSQSFFLVA 88
            L++L+A VLHM  A  E   V +   +IR QDRDPFKE YFNM+++ F LMFFFIGCMFSVRICLGK+RGNDS SFFLVA
Sbjct:    8 LLVLLAAVLHMMGAAAEDFEVSTGVGSIRAQDRDPFKEGYFNMIISCFALMFFFIGCMFSVRICLGKKRGNDSHSFFLVA 87
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.165.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKI6_ECTSI2.330e-2867.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig122contigP-littoralis_Contig122:504186..504452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig122.165.1mRNA_P-littoralis_Contig122.165.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig122 504182..504469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig122.165.1 ID=prot_P-littoralis_Contig122.165.1|Name=mRNA_P-littoralis_Contig122.165.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=89bp
MLSMMKSPLLVILMAMVLHMASAGFELAVDSEGDTIRTQDRDPFKEDYFN
MVLASFLLMFFFIGCMFSVRICLGKRRGNDSQSFFLVA*
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