prot_P-littoralis_Contig122.41.397 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Match: D8LLI4_ECTSI (SEN1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI4_ECTSI) HSP 1 Score: 1483 bits (3838), Expect = 0.000e+0 Identity = 1057/1992 (53.06%), Postives = 1214/1992 (60.94%), Query Frame = 0
Query: 1 MDVEVISVDDDDGESN-EEGXXXXXXXXXXXXDDDFEIFSQEKVRYQNDDGNSPNSSNAETSPSFGEAAANTAT--IDLTMTAPETA-QDFEQEYDALRRNAQGFMFPFESVSELLLRHSEHWWCRYTDAMTEMLLSLEGGLEDET---HAIRYDEATLRIDSPLISPLHHATGVSIVWQQSSLQLSSCKRCLRCYHAAKERVILRLLSDEERPVDIKRLTTTILEQDSKRLQRSFRSAQKAPAPTSASAIMKVGSRPTATGVAIGQVPEAG--SVAAMVTASASLAPGMNANHAFWEVLSYSQLLEDSGIQDAFVAALARVTSSGADIFSGEEWNQHWPGVLTLLVHKDASVRAWAQLMARRAGKIRAKEYVEVLSPVIDQWVPVLEQGLIGSG-QPVAAVSERGEE-ERLHWSGLHVALQLLEPSAGRLVANGFQTLVDLALQKFDNGPGH--ISLYLQVCGCLASLLRLLGAGIWDYSSRQPSEVLEAFERQIRHEGDDSVLFGVVGAGGRTLRPPNEAIHKKVLEMLPLLVSSVARECSSSQRVGGGMSGDVPYGSGESLGEGREESGMMVGGRDDGPIAADSFSLADEALGFLSRDVALLSAL--DANHGANRRRKMALARTLLDVLEICYNGTSSGGGGASGHSNDAENHDGDPLSPESWPWNSAATGRADHA--VSSSWWHPSWPVRSVPLWGPRLADIAGDRSSRSSGGTSESGSTSGGGALVVDRAARVVELVLRQHSRAAWRKTLATLR----PRTLDSGSAAQKSGGVTRKEAEDKGEVLPLCGPLLERICLELPLMDLPVRVHAAVFEAHGWLSLLPCVGDSAIRAAENRCGPQASRSLAQLHSGMISQFLKLFVPYVEGLTKTVKSRGASVSPALLPQVVPHIFQALLAAVPAARAALEELLLCSVVSDRRFGDAREVFKKGDLRPVLARLPLDCARACFLAVPQALGAMAAAGPHLTLKSWSPLFQAVGVLGCAVLLPPTSGFSDPRRRGGEGDDEEY-DNELWGALEGVWEFIFLQVLPEALPALREQHATRLEDAIRALFGSLESLWPLLTGPVPRSRRPQLADDFYRSRSLWLQPLLAWVSEAWLPLPAREAAAGFVQRALLPLLHSSSRAPPAGAASGKGADQSVFDHQGVSAAASPKSKTRQLRLMGAKLCAVEEEQGRGEGGNGDEFGSEAEEAKILQALESAASAATTT-VAVDPSPVQAAPEGSPEVPWVGLGPSEPTNPFVRTAVPLPGAVRSRERGGSSVASEGWSSTPWQQRLGVASSS-PHLTSAGGASSRPSSSQ-SVRSPPAAPASRFRNEIVRSSA----AGEARRDRQRSAVELSPEELPNHQQIDRSSAVGGAQGSRNQTASSARRREEKLSSISVQMGSWAGSNSATVVAAVKANSTVGSS-GADDGKEYANTAEAAAYVSRAEEVVA------------ARPRGSVVERWREMQRKQMEETQEPASVGSQKGPHQVDQRAQARLSTDAAKAIAPARPETVASHSAAXXXXXXXXXXXXXXXXXXXXGGAKAREPV---ERPVDYTSLAEASSMELHRLVLSTWTIPELLAAPMKSAR-----QGASEGQD--RRWLSSLWLPKVPTRFQSAEQYVDIFRGLLLEEIFATLGAALKGGGEXXXXXXXXRPSEAATLSVESFVETGKEGFSHITMVASDGSSRGGGRQDQGAGGVMAGYFPRFVHDDVLLLSLVERS----GGNDDSLDGSA---NIACLGIFDKEPRGSARGAAGPPGRERSSIRAKVFFRPSAAADRRRDESSNVEKGS---IPKKVTPASPENGEDRREEDGPAGAILRAFREPGTLVRVTRLEGLSTSTREFVALEATPTRGYLLHHLLQATSNPRLLPVPPAALR-PRNNNTNSPNP-RTTLGPPYPVDEASFTDTCKRLSSVEGS-LLGVSGGGDRTAGNRRPSGRGEDERPEGRHPDSGGISGVDKTVPTDLLMRSLGCLASFR 1927
MDVEVISVD ESN EEG D EIFSQE+ D AE P E + AT IDLT E A FEQEYD L R+AQGF FPFE+V+ELLLRH EHWWCRY DAM EMLLSL+GG E E + D +T DS TGV IVWQ SLQLS+CKRCLR YHAAKE V+ RLLS+EERP + +RL +LE D RLQRSFRS KAPA A + GS ATG + V + A TAS+S G++ AFWEVLSYSQLLED GI+ AF+AAL++VTSSG +FSGEEWNQHWPGVLTLLVH++AS RAWAQ MARRAG IRAKEYVEVLSPVID+WVPVLE+GL G P A+ S+ + ERLHWSGLHVALQLLEPSA L+A GF TLVDLALQKFD+GPG +SLYLQVCGCL++LLRLLGA +W+YSSRQPSEVLEA ERQ + GD + G G R L PNEAI KKV EMLPLLVSS A S G G YG+ + +G G + G+ DD AA +AD L FLSR++A LSA+ + N GA+ RR+MALA+ LL VLE CYNG++ GG + D D L PESWPWN+ S +W +PSWPVRSVP WGPRLADIAGDRS R+SG ++ VVDRAARVV+LVLR+H AAWR L+ LR + SGSA+Q SG + ED+ V+PLCGPLLERICLELPLMDLPVRVHAAVFEAHGWLSLLPC G SAIRAAE R GP ASR LA LHSGM+SQF++LFVPYV+GLT+ VK+RGA LLAAVP ARAALEEL+ SV SD ++GDLRP+L R P DCARACF AVPQALGAMAAAGPHL+LKSWSPLFQAVGVLGCAVLLP S ++ELW LE VWEFIFLQV+PEALPALREQHATRLE+A RALFGSLESLWPLLTGP + RRP+L D FYRSRSLWLQPLL+WVS AWLP AREAAA FVQR+LLP LH+SS G+A+G G ++ S SP+ + +RL+G KL AVE GEG + SE EA +L AL+SAA AAT AVDP AA G+ + P NPF +A R GGSS AS GWS TPW+ RLGV +S+ P SAG S + +Q + SP AAP R +R + AG R S G + + S R EK +S +V SNS + VGSS GA K Y AEAA ARPRGSVVERWREMQR+QM ET E + +Q+R XXXXXXXXXXXXXX GG + +DY SLAEAS+ ELH+LVLS+WT+PEL AA KSAR QG G + R SSLWL KVPTRFQS EQY+++FRGLLL+EIFATL AAL GGG XXXXXXXX P EA TL V S VE GK GF HITMVA DG G RF HDDVLLLSL + S GG S DG + ACLG+F+KEPRG+ARG AG PG RSS+RAKV FR +A DR R+ S+ +E+G+ IPKK T S G+ + EE+ A A+LRAFRE G+ VRVTRLEGLSTSTREFVALEA+P R LLHH+LQATS P L P+ R P N+ T++ N T L PPY VDEASF D CKRLSSVE S LLG SG G G P D P + LMRSLGCLASFR
Sbjct: 1 MDVEVISVDGQSDESNLEEGELG-----------DEEIFSQEQPAQGEQD--------AEIPPQQQEQQHDLATDTIDLTAAGCEAAISRFEQEYDDLHRSAQGFGFPFEAVAELLLRHPEHWWCRYPDAMAEMLLSLDGGCESEGLPYAPVTSDTSTTSSDS--------LTGVGIVWQTVSLQLSTCKRCLRRYHAAKETVLARLLSEEERPAETQRLEAAVLEHDRDRLQRSFRSTGKAPAGIPARSD-GAGSGTVATGQGLAGVDGEACKTTGAAATASSSFPLGVDGTLAFWEVLSYSQLLEDGGIEGAFLAALSQVTSSGEGVFSGEEWNQHWPGVLTLLVHREASTRAWAQSMARRAGGIRAKEYVEVLSPVIDRWVPVLERGLSSGGAHPTASGSDPDSDGERLHWSGLHVALQLLEPSAAPLLAYGFPTLVDLALQKFDDGPGPRGVSLYLQVCGCLSALLRLLGAEMWEYSSRQPSEVLEALERQTSY-GDGADTADFRGTGRRML--PNEAIQKKVFEMLPLLVSSAAAVDRPSGATGWGT---AVYGN-QGIGGGTDHPGVAARHIDDAAAAAGVLPVADAVLSFLSREIASLSAVAPENNRGAHGRRQMALAKALLGVLETCYNGSAGGG---------ESDDDSDLLEPESWPWNAXXXXXXXXXXXTSGAWCYPSWPVRSVPSWGPRLADIAGDRSGRASGESTA--------VAVVDRAARVVQLVLREHGGAAWRAALSALRLPPSASSSGSGSASQSSGRM-----EDEECVVPLCGPLLERICLELPLMDLPVRVHAAVFEAHGWLSLLPC-GHSAIRAAEGRGGPAASRVLAALHSGMMSQFVRLFVPYVQGLTEIVKNRGA-----------------LLAAVPTARAALEELVSRSVFSDGG--------RRGDLRPLLGRFPPDCARACFQAVPQALGAMAAAGPHLSLKSWSPLFQAVGVLGCAVLLPKASAADGXXXXXXXXXXXXXXEDELWEVLEAVWEFIFLQVIPEALPALREQHATRLEEAFRALFGSLESLWPLLTGPAAQRRRPRLTDGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHASS----CGSAAGGGDERGARGDDDPSVGVSPR---KTVRLVGDKLRAVE-----GEGRSAWALSSEEPEADLLAALKSAAVAATAKGTAVDPCSPPAATGGAAXXXXXXXXXAAPRNPFALSAA-------RRGNGGSSAAS-GWSRTPWEDRLGVGNSATPSSESAGRPLSESALAQITYSSPAAAPERTARTPGLRRGSHYPKAGGNDXXXXXXXXXXXXXXXXXXXXXFRDSR--GRSTAASTEGGSLGVRPEKTASRAV-------SNSTA-----NDDDEVGSSSGARGRKTYVTAAEAAXXXXXXXXXXXXXXXXXXXXXXXARPRGSVVERWREMQRRQMGETTEVVAS--------APAASQSRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGDSPDGGNGSLATTVAGAATLDYASLAEASATELHKLVLSSWTVPELFAASTKSARSGGRFQGPKRGHEVGRSSSSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAALDGGGSXXXXXXXXXPPEAMTLRVASLVEGGKGGFGHITMVADDGG----------------GSSHRFAHDDVLLLSLAKPSDGAVGGGHVSGDGGSAATTTACLGLFEKEPRGAARGPAGMPGSGRSSVRAKVLFRSTAPGDRGRNRST-IERGAGAIIPKKATAES--RGQGQGEEEA-ASAVLRAFRELGSQVRVTRLEGLSTSTREFVALEASP-RAALLHHILQATSEPSLQPLQETPQRAPGNSTTSNDNLWATKLAPPYLVDEASFADACKRLSSVEDSALLGESGAG-------------------GGSPAIAAGLAADIAGPAESLMRSLGCLASFR 1827
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Match: D8LLI3_ECTSI (Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI3_ECTSI) HSP 1 Score: 899 bits (2322), Expect = 7.180e-286 Identity = 617/1129 (54.65%), Postives = 697/1129 (61.74%), Query Frame = 0
Query: 2042 KSAGSSPDKGAVSSRHDQPPKHSSPPQQLQGQNHQRSPERPSLVPAALWDRLSQEFNSSQLSAIWAAAASALEARQEGSKAVSGTIEAGGTEHVGGV--EAEPIARRTPVIDAAMASRRKSDEGAHRGGGKGGVVLLQGPPGTGKTRTILGVVSAILARGEEKDVAGRGGSFGSGXXXXXXXXXXXSSAGVGNRGMGTTLEVGTKQKRPGLAGRWAAAKTHQRMLVCAPSNGAVDELTNRLALESGGVWDHRGKAFAPRIVRLGKPSEEAPGRVKGVSLEVMVEERVKLHAKSTEARNAEMKVREAYAHIEEAGRALRSGGADAGEIPGVAGIGTYIPCVRVYVRLDTRRRHQLTIHIRRLRGEVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARDLCATLSACGSAPLVEAVSLTGKGFDTVIVDEACQATEPSTLIPLSLGCIRLILVGDPRQLPATVISQRAARLNLEISLFERLESAGHPVHMLTVQYRMHPEIRAFPSERFYDGRLTDAPCVRGEVNQPAAGVPLSSTEPTAVVVATSKPHRPPRPLGPCFPPFLVVDVTSGSERRVGSSYQNPWEASFVAAFLSRLVVSGLRDGRGIKSAGDSGGGTAAGSGTG--SAGVIRVGVITPYRGQVQCIRQELGSSR------RLKGGAEDGGVEVEVSTVDGFQGKEVDVVLFSCVRAPSSLNTGYGGRGGGRGGIGFLADRRRMNVAITRAKRSLVVLGNTRRLSSDTTWKALVDHAKSRERLVSDMADFRGGRXXXXGRESGEALCARLEAKYDASKSGLKGISPSCTRNPDRGLDAESSPNENGVHDGSAGTCPLGGDGDAEEKKHGKARSGQRSSTQQPGSDTETLGRKAADNAPAVEERRTHSLGKSLDRRLHGNGVPHGRQEKPPRSAGATRPPPPVEREGRDGQDRKRTNLNRRHDAGGDSSTSRRRKTTSLSAGETRSPPVQGAGGAERDHRLA---QQAEAVAAGVMGT---GAISSPVGNKRRESRADIPRKRARVAGPEPKRGDISEREKSCLDTGTAKRQSSCKSTAGGFLAGLLNSVAENASGIASGKEYEIRQGLRGGEDDERKRAAAGPRLGGARVTELSHPPTETFGPSLQGRHSPR 3154
KS + PD G+ SS D PK + PP++ Q + Q +P+RPSLVPAALWDRLSQEFN SQL AIWAAAASA EA+++ + A ++ G EA +A R ++ A LLQGPPGTGKTRT+LGVVSAILAR EEKD X G RGMGTTL G +QKRPG+AGRW AAKTHQR+LVCAPSNGAVDEL RLALESGGVWD RG A APR+VRLGKPSE+A RVK VSLE MVEERVKLHAKS EAR AE K+RE +A I+EAGRA+RSGG GE+ GVAGIG+ RRHQL HIRRLRGE+LVAKQRRRDALR LEVERG+IRRSLV +CATLS CGS P+VEAVSL+GKGFDTVIVDEACQATEPSTLIPLSLGC RLILVGDPRQLPATVISQRAARLNLE+SLFERLE AG+PVHMLTVQYRMHPEIRAFPS RFY+GRLTDAPCVR + PA S+E TA+ PLGPCFPPFL+VDV+SGSERR GSSYQNP EASFV+AFL+RLV SGLR GRG+K+ G G +GV+RVGVITPYRGQV CI+QEL RLKGG EDGGV+ EVSTVDGFQGKEVDVVLFSCVRAPSS IGFLAD+RRMNVA+TRA+RSLVVLGN RLSSD TWKALVDH+KSR+RL + R XXX GEALCARLE K G DR D +S+ GG G+A++ G +G GSD + + A PA H G G VP R +A A PP V G DR+ N RH+ S +RRK +S R P G G+ RD QQ A G T A P G A+ P+KRAR G G AKR S+ GGFL GLL+S++ NA GIASGKE++ RQGLRGGED+ER+R AA PRLGGARVTELS P P RHS R
Sbjct: 37 KSPATIPDAGSSSS--DVSPKDTCPPEKQQ-KKRQETPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREAQED--------LAAAARDNDGRATPEAAVLAERRAPVNHAXXXXXXXXXXXXXXXXXXXXXLLQGPPGTGKTRTVLGVVSAILARREEKDCGSX-----------------XXXXXXGARGMGTTLAPGARQKRPGVAGRWVAAKTHQRILVCAPSNGAVDELAQRLALESGGVWDQRGNAVAPRVVRLGKPSEDAADRVKAVSLEFMVEERVKLHAKSAEARTAETKIRETHARIDEAGRAVRSGGV--GEVGGVAGIGS-----------AENRRHQLNTHIRRLRGELLVAKQRRRDALRSLEVERGKIRRSLV-------VCATLSGCGSGPMVEAVSLSGKGFDTVIVDEACQATEPSTLIPLSLGCKRLILVGDPRQLPATVISQRAARLNLEVSLFERLERAGYPVHMLTVQYRMHPEIRAFPSARFYNGRLTDAPCVRDQAAIPAQS---PSSETTALP-----------PLGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVASGLRSGRGVKAGGXXXXXXXXXXGQDREKSGVVRVGVITPYRGQVHCIQQELSGXXXXXXXXRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXXXXXX-------IGFLADQRRMNVALTRARRSLVVLGNVGRLSSDGTWKALVDHSKSRDRLEPEAVKARTSGGXXXXXXDGEALCARLEETAAGKKGGR-----------DRSGDRQST---------GRNRAGRGGRGEADDAV-GSGVAG--------GSDKKEI---QAPRRPAGSRTGGHGRGDGSG----GINVPDDR------AAAAVVVPPAVADIGEHCADRR---ANPRHEPESVGS-GQRRKPSSRGGDGVR--PSAGLEGSVRDRPPVDKRQQRHEEAGGAKPTPRGSACRRPDGGA-----ANRPQKRARADGQ-----------------GAAKRVSTPD---GGFLGGLLSSLSSNAGGIASGKEHDFRQGLRGGEDEERRRVAAAPRLGGARVTELSRPVEPKQAPPA--RHSSR 1021
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Match: A0A6H5J5S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5S7_9PHAE) HSP 1 Score: 757 bits (1954), Expect = 1.700e-235 Identity = 587/1244 (47.19%), Postives = 687/1244 (55.23%), Query Frame = 0
Query: 464 IWDYSSRQPSEVLEAFERQIRHEGDDSVLFGVVGAGGRTLRPPNEAIHKKVLEMLPLLVSSVARECSSSQRVGGGMS-GDVPYGSGESLGEGREESGMMVGGRDDGPIAADSFSLADEALGFLSRDVALLSAL--DANHGANRRRKMALARTLLDVLEICYNGTSSGGGGASGHSNDAENHDGDPLSPESWPWNSAATGRADHAV-SSSWWHPSWPVRSVPLWGPRLADIAGDRSSRSSGGTSESGSTSGGGALVVDRAARVVELVLRQHSRAAWRKTLATLRPRTLDSGS------AAQKSGGVTRKEAEDKGEVLPLCGPLLERICLELPLMDLPVRVHAAVFEAHGWLSLLPCVGDSAIRAAENRCGPQASRSLAQLHSGMISQFLKLFVPYVEGLTKTVKSRGASVSPALLPQVVPHIFQALLAAVPAARAALEELLLCSVVSDRRFGDAREVFKKGDLRPVLARLPLDCARACFLAVPQALGAMAAAGPHLTLKSWSPLFQAVGVLGCAVLLPPTSGFSDPRRRGGEGDDEEY------DNELWGALEGVWEFIFLQVLPEALPALREQHATRLEDAIRALFGSLESLWPLLTGPVPRSRRPQLADDFYRSRSLWLQPLLAWVSEAWLPLPAREAAAGFVQRALLPLLHSSSRAPPAGAASGKGADQSVFDHQGVSAAASPKSKTRQLRLMGAKLCAVEEEQGRGEGGNGDEFGS-EAEEAKILQALESAASAATTT-VAVDPSPVQAAPEGSPEVPWVGLGPSEPTNPFVRTAVPLPGAVRSRERGGSSVASEGWSSTPWQQRLGVASSS-PHLTSAGGASSRPSSSQSVRSPPAA---PASRFRNEIVRS------------------SAAGEA-----RRDRQRSAVELSPEELPNHQQIDRSSAVGGAQGSRNQTASSARRREEKLSSISVQMGSWAGSNSATVVAAVKANSTVGSSGADDGKEYANTAEAAAY-VSRAEEVVA------------ARPRGSVVERWREMQRKQMEETQE---PASVGSQKGPHQVDQRAQARLSTDAAKAIAPARPETVASHSAAXXXXXXXXXXXXXXXXXXXXGGAKAREPVERPVDYTSLAEASSMELHRLVLSTWTIPELLAAPMKSAR-----QGASEGQD--RRWLSSLWLPKVPTRFQSAEQYVDIFRGLLLEEIFATLGAALKGGGEXXXXXXXXRPSEAATLSVESFVETGKEGFSHITMVASDG 1639
+W+YSSRQPSEVLEA ERQ + GD + G G R PPNEAI KKV EMLPLLVSS S+ R GG G YG+ E GE + G DD AA +AD AL FLSR++A LSA+ +A GA+ RRK+ALA+ +L VLE CY+G S GGGAS +++D D L PESWPWN+AA S +W+HPSWPVRS+P +GST+ VVDRAARVV+LVLR+H+ AAWR L+ LRP L S S A+Q SG + ED V+PLCGPLLERICLELPLMDLPVRVHAAVFE HGWLSLLPC GDSAIRAAE R GP ASR LA LHSG +SQF+KLFVPYV+GLT+ VK+RG V P I QALLA +PAARAALEEL+ SV SD ++GDLR +L R P DCARACF AVPQALGAMAAAGPH +LKSWSPLFQAVGVLGCAVLLP S + ELW LE VWEFIFLQV LWPLLTGPV + RRP+LAD FYRSRSLWLQPLL+WVS AWLP AREAAA FVQR+LLP LH+SS +A+ G D+ S SP+ + +RL+G KLCAVE G+GG+ S + EEA +L L+SAA+AATT AVDP AAP G+ P P NPF +A R GGSS AS GWS TPW+ RLG +S+ P L SAG S + +Q S PAA P R I+ S S AG+ R R RS +S GG+ G R EK +S +V +W + + + SSGA K Y AEAAA VS A+ ARPRGSVVERWREMQR+Q+ ET E A SQ ++ A +T + + A G +DY SLAEAS+ ELH+LVLS+WT+PEL AA KSAR QG G + R SSLWL KVPTRFQS EQY+++FRGLLL+EIFATL AAL GGG XXXXXXXX P EA TL V S VE GK GF H+T+VA DG
Sbjct: 1 MWEYSSRQPSEVLEALERQTSY-GDGADTADFRGTGRRM--PPNEAIQKKVFEMLPLLVSSA----SAVDRPSGGTGVGTAVYGNQEVGGE-ADHPGAAARRVDDAAAAASVLPVADAALSFLSREIASLSAVAPEARRGAHGRRKLALAKAVLGVLENCYDG--SAGGGASD-----DDYDSDVLGPESWPWNAAAXXXXXXXXXSGAWYHPSWPVRSLPXXXXXXXXXXXXXXXXXXXXXXXNGSTA---VAVVDRAARVVQLVLREHAGAAWRVALSALRP--LPSASSXXXXXASQSSGRM-----EDDECVVPLCGPLLERICLELPLMDLPVRVHAAVFEVHGWLSLLPC-GDSAIRAAEGRGGPAASRVLAALHSGTMSQFVKLFVPYVQGLTEIVKNRG----------VAPSILQALLATIPAARAALEELVSRSVFSDGG--------RRGDLRLLLGRFPPDCARACFQAVPQALGAMAAAGPHFSLKSWSPLFQAVGVLGCAVLLPEASAGDXXXXXXXXXXXXXXXXXXWEECELWEVLEAVWEFIFLQV---------------------------GYLWPLLTGPVAQRRRPRLADGFYRSRSLWLQPLLSWVSAAWLPRVAREAAAIFVQRSLLPFLHASS----CSSAANGGDDRGACGDDDPSVGVSPR---KTIRLVGDKLCAVE-----GDGGSAWALSSGDPEEADLLAVLKSAAAAATTEGTAVDPCSPPAAPRGAARSRVDPHSPEAPRNPFALSAA-------RRGNGGSSAAS-GWSRTPWEDRLGARNSATPSLESAGRPLSGSALAQVTYSSPAAAPEPTVRTPGVILGSHYPRAGGNDFSQAREGGGSTAGDGXXXGFRDSRGRSTT---------------ASTEGGSLGV----------RPEKTASRAVS--NWTANEDGELGS---------SSGARSRKTYVTAAEAAAARVSEAKXXXXXXXXXXXXXXXXARPRGSVVERWREMQRRQVGETTEVVASAPAASQSRSLXXXXXXXXXXXXXXXRSPRNAAVQTTSKEARAAFATAAQAAARRGDSPDGGNGSLAITAARAATLDYASLAEASATELHKLVLSSWTVPELFAASTKSARSGGRFQGPKRGHEVGRSSSSSLWLSKVPTRFQSVEQYLEVFRGLLLDEIFATLVAALDGGGSXXXXXXXXGPPEAMTLRVASLVEGGKGGFGHVTLVADDG 1117
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Match: A0A6H5J6B2_9PHAE (AAA_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6B2_9PHAE) HSP 1 Score: 464 bits (1194), Expect = 3.550e-141 Identity = 332/641 (51.79%), Postives = 375/641 (58.50%), Query Frame = 0
Query: 1813 QATSNPRLLPVPPAALRPRNNNTNSPNP-RTTLGPPYPVDEASFTDTCKRLSSVEGS-LLGVSGGGDRTAGNRRPSGRGEDERPEGRHPDSGGISGVDKTVPTDLLMRSLGCLASFRLTSELLTSHGRGTATRLKRISKSQVWSPEARDAAARLLHTWRGVVDVSSTAQP-PEVDAKLSRAQERGDDEGGRKV------NAKGKRGVAHVKDRAVAAAAVSGRGDEAKKEEDT--------SRSKRKSAGSSPDKGAVSSRHDQPPKHSSPPQQLQGQNHQRSPERPSLVPAALWDRLSQEFNSSQLSAIWAAAASALEARQEGSKAVSGTIEAGGTEHVGGVEAEPIARRTPVIDAAMASRRKSDEGAHRGGGKGGVVLLQGPPGTGKTRTILGVVSAILARGEEKDVAGRGGSFGSGXXXXXXXXXXXSSAGVGNRGMGTTLEVGTKQKRPGLAGRWAAAKTHQRMLVCAPSNGAVDELTNRLALESGGVWDHRGKAFAPRIVRLGKPSEEAPGRVKGVSLEVMVEERVKLHAKSTEARNAEMKVREAYAHIEEAGRALRSGGADAGEIPGVAGIGTYIPCVRVYVRLDTRRRHQLTIHIRRLRGEVLVAKQRRRDALRGLEVERGRIRRSLVSNAQAR 2436
QATS P L P+P A R N+T S N T L PPY VDEASFTD CKRLSSVE S LLG SG G G P + D P + LMRSLGCLASFR+ ELLTSHGRGTA RLKR+SKS+VW P+ R+AAARLL WRGVVDV A + K S+ +ERG G AK K G + DR AA+ R K++ S S KS PD G+ SS D PK + PP++ Q + Q++P+RPSLVPAALWDRLSQEFN SQL AIWAAAASA EA ++ + A G E V AE RR PV AA LLQGPPGTGKTRT+LGVVSAILAR EEKD A GG +G RGMGTTL +QKRPG+AGRW AAKTHQR+LVCAPSNGAVDEL RLALESGGVWD RG A APR+VRLGKPSE+A RVK VSLE MVEERVKLHAKS EARNAE K+RE +A I+EAGRA+RSG D GE+ G+AGIG+ RDALR L+VERG+IRRSLVSNAQAR
Sbjct: 4 QATSEPSLQPLPETAQRAPGNSTTSNNLWATKLAPPYLVDEASFTDACKRLSSVEDSALLGKSGAG-------------------GGSPATAAGLAADIAGPEESLMRSLGCLASFRVAPELLTSHGRGTAKRLKRLSKSEVWGPDVRNAAARLLRAWRGVVDVGGGATAYSKAATKRSQDEERGGAGSGXXXXXXXXGGAKAKVGAEQIVDRVRPAASTKPRLVGEKEQXXXXXXXXXGISSSGHKSPAPMPDAGSSSS--DFSPKVTCPPEKQQKEQ-QQTPKRPSLVPAALWDRLSQEFNVSQLRAIWAAAASAREAHEDLAAAARGNDGPATPETA--VLAE---RRAPVNHAAXXXXXXXXXXXXXXXXXXXXXLLQGPPGTGKTRTVLGVVSAILARREEKDCASGGGR-----------------SGASARGMGTTLAPEARQKRPGVAGRWVAAKTHQRVLVCAPSNGAVDELAQRLALESGGVWDQRGNATAPRVVRLGKPSEDAADRVKAVSLEFMVEERVKLHAKSAEARNAETKIRETHARIDEAGRAVRSG--DVGEVGGMAGIGS----------------------------------AENRDALRSLDVERGKIRRSLVSNAQAR 564
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Match: A0A6H5J8A4_9PHAE (AAA_12 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8A4_9PHAE) HSP 1 Score: 370 bits (951), Expect = 9.690e-107 Identity = 332/837 (39.67%), Postives = 407/837 (48.63%), Query Frame = 0
Query: 2539 IRAFPSERFYDGRLTDAPCVRGEVNQPAAGVPLSSTEPTAVVVATSKPHRPPRPLGPCFPPFLVVDVTSGSERRVGSSYQNPWEASFVAAFLSRLVVSGLRDGRGIKSAGDSGGGTAAGSGTGS---AGVIRVGVITPYRGQVQCIRQEL---GSSRRLKGGAEDGGVEVEVSTVDGFQGKEVDVVLFSCVRAPSSLNTGYGGRGGGRGGIGFLADRRRMNVAITRAKRSLVVLGNTRRLSSDTTWKALVDHAKSRERLVSDMADFRGGRXXXXGRESGEALCARLEAKYDASKSGLKGISPSCTRNPDRGLDAESSPNENGVHDGSAGTCPLGGDGDAEEKKHGKARSGQRSSTQQPGSDTETLGRKAADNAPAVE-ERRTHSLGKSLDRRLHGNGVPHGRQEKPPRSAGATRPPPPVEREGRDGQDRKRTNLNRRHDAGGDSSTSRRRKTTSLSAGETRS-----------PPVQGAGGAERDHRLAQQAEAVAAGVMGTGAISSPVGNKRRESRADIPRKRARVAGPEPKRGDISEREKSCLDTGTAKRQSSCKSTAGGFLAGLLNSVAENASGIASGKEYEIRQGLRGGEDDERKRAAAGPRLGGARVTELSHPPTETFGPSLQGRHSPRPSTDSRNRPKVADLLGKDSRSRRSHRQIAGRSKAETFTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSHAGSRGDVRRNVAGADHRRSPEERNKRARPVQPAVAGRGDAGNPSVGTGSRRPGGATRPPAPRNYGAAGIGRVGARADSAKKGGAKAGKKSVAGMGVLDILKDISDTWGDSSAKK 3357
+ A S RFY+GRLTDAPCVR + PA +T P A+ PLGPCFPPFL+VDV+SGSERR GSSYQNP EASFV+AFL+RLV SGLR GRG+K+ G +GV+RVG+ITPYRGQV CI+QEL G RRLKGG EDGGV+ EVSTVDGFQGKEVDVVLFSCVRAPSS IGFLAD+RRMNVA+TRA+ SL++LGN RLSSD TW ALVDH+KSRERL ++ R XXX GEALCARLE K A K G + DR D + G AG GG G+A++ +G + AD + E + + G + G+G G R+A A PP + E KR N + ++GG + +RRK + E R PPV E+ + ++A G+ A P G A+ P+KRARV G E AKR S+ S GFL GLL+S++ NA GIASGKE++ RQGLRGGED A PRLGGARVTELS P PS RHS R + AD G+ + R R G + T + RG + P E+ KRAR V+PA A ++G S R G + PA R GA+G R G ++ AKK G++A + G VLDIL+ ISDTWGDSS KK
Sbjct: 9 VPAGSSARFYNGRLTDAPCVRDQAAIPAPSPSSEATGPLALP-----------PLGPCFPPFLLVDVSSGSERRAGSSYQNPREASFVSAFLARLVASGLRSGRGVKAGGXXXXXXXXXXXXRDREKSGVVRVGIITPYRGQVHCIQQELSGGGGGRRLKGGVEDGGVDAEVSTVDGFQGKEVDVVLFSCVRAPSSGXXXXXXXXX----IGFLADQRRMNVALTRARCSLIILGNVGRLSSDATWNALVDHSKSRERLEPEVVKARTSGGXXXXXXDGEALCARLE-KAAAGKKGGR----------DRSGDRQ------GTGRNQAG---RGGRGEADD----------------------AVGSRVADGSDGKEIQAPRRAAGSRTGGHVRGDGS-GGINVPDDRAAAAAVPPAVTDIEEHCAD--KRANPQHKPESGG---SGQRRKPSWRGGDEVRPSARLEESMRDRPPV------EKHQQRHEEAGGAKPTPRGS-ACKRPDGGA-----ANRPQKRARVYGQE-----------------AAKRVSTPDS---GFLGGLLSSLSSNAGGIASGKEHDFRQGLRGGEDXXXXXXXAAPRLGGARVTELSRPVEREQAPSA--RHSSRAAA-------AADATGRQTPVERDDRGGRGSHRGVDSTEVVPPSTRTDARNGGRVVGTSSASTVDARRVAPSTARRDASSARDYRVGRNQFGRGANQH----LQPPPQPSEQRKRARRVEPAAATGAESGGASS-----RAGVGKQLPASRRPGASGS-RSGGKSVGAKKTGSEASRGG-GGTSVLDILQGISDTWGDSSKKK 730
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Match: W7TPV4_9STRA (Helicase sen1 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPV4_9STRA) HSP 1 Score: 298 bits (762), Expect = 9.220e-77 Identity = 235/648 (36.27%), Postives = 326/648 (50.31%), Query Frame = 0
Query: 2148 PVIDAAMASRRKSDEGAHRGGGKGGVVLLQGPPGTGKTRTILGVVSAILARGEEKDVAGRGGSFGSGXXXXXXXXXXXSSAGVGNRGMGTTLEVGTKQKRPGLAGRWAAAKTHQRMLVCAPSNGAVDELTNRLALESGGVWDHRGKAFAPRIVRLGKPSEEAPGRVKGVSLEVMVEERVKLHAKSTEARNAEMKVREAYAHIEEAGRALRSGGADAGEIP---GVAGIGTYIPCVRVYVRLDTRRRHQLTIHIRRLRGEVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARDLCATLSACGSAPLVEAVSLTGKGFDTVIVDEACQATEPSTLIPLSLGCIRLILVGDPRQLPATVISQRAARLNLEISLFERLESAGHPVHMLTVQYRMHPEIRAFPSERFYDGRLTDAPCVRGEVNQPAAGVPLSSTEPTAVVVATSKPHRPPRPLGPCFPPFLVVDVTSGSERRVGSSYQNPWEASFVAAFLSRLVVSGLRDGRGIKSAGDSGGGTAAGSGTGSAGVIRVGVITPYRGQVQCIRQELGSSRRLKGGAEDGGVEVEVSTVDGFQGKEVDVVLFSCVRAPSSLNTGYGGRGGGRGGIGFLADRRRMNVAITRAKRSLVVLGNTRRLSSDTTWKALVDHAKSRERLV 2792
P + A AS + + H+G V LLQGPPGTGKTR I+G++SAI+ S+ V RP L + + R+LVCAPSNGA+DE+T RL + G+ + G+ F P +VRLG +A VK VSLE +E + + + E A+ +V ++ R R DA + G+ G ++R +R+ R R E+ AK+RR + L+ LE E+ RIR +L+ +A+ + +TLS S+ L EAV+ T +GF TV++DEA QA EPSTLIPL GC LILVGDPRQLPATV+S + + SLFERLE GHPVH+L VQYRM P I FPS+ FY +L++AP + E + A L + P F + V +V+S E + G++ N EA F ++RL V D K + VITPYR QV+ + + L R++ G E+G EVST+DGFQG+E +V++FSCVRA T IGFLAD RRMNV +TRA+RSL VL + L +D +W+A ++ A+ R+ LV
Sbjct: 1951 PQLKAISASCFINAQAVHQGCE---VTLLQGPPGTGKTRCIMGLLSAIMHS-----------------RPTSTYYPSHSATNV----------------RPALRVGYRHHQREARILVCAPSNGAIDEITMRL--QRTGLLNAEGQVFKPTLVRLGVVDPDAEEEVKTVSLESQLERALLTNFQKKEYDKADAEV----LRLQRDERDAREIALDARKCRLDHGLHGRNEGEVEESEWLRKAEQRQ-------RISRSELYRAKRRRWECLKALEAEKSRIRNNLIRDAKI--ILSTLSTAASSQLAEAVTSTSRGFGTVVIDEAGQAVEPSTLIPLRYGCRNLILVGDPRQLPATVMSPVLQKYKYDRSLFERLEKGGHPVHLLRVQYRMRPPICRFPSQAFYHNKLSNAPAL--EAAEEDADGDLKRYDRV-----------------PYFGAYRVFNVSSAREIKRGNAISNIEEAIFAVQLIARLRVE-FPDLVAFK---------------------HMAVITPYRAQVRLVEEHL----RVRFG-EEGSSLAEVSTIDGFQGREKEVIIFSCVRANPQGGT-----------IGFLADERRMNVGLTRARRSLFVLCHRASLWTDRSWRAFIEDAEERQSLV 2490
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Match: B6K5E8_SCHJY (Helicase sen1 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K5E8_SCHJY) HSP 1 Score: 261 bits (666), Expect = 1.000e-65 Identity = 212/663 (31.98%), Postives = 320/663 (48.27%), Query Frame = 0
Query: 2143 IARRTPVIDAAMASRRKSDEGA---HRGGGKGGVVLLQGPPGTGKTRTILGVVSAILARGEEKDVAGRGGSFGSGXXXXXXXXXXXSSAGVGNRGMGTTLEVGTKQKRPGLAGRWAAAKTHQRMLVCAPSNGAVDELTNRLALESGGVWDHRGKAFAPRIVRLGKPSEEAPGRVKGVSLEVMVEERVK-LHAKSTEARNAEMKVREAYAHIEEAGRALRSGGADAGEIPGVAGIGTYIPCVRVYVRLDTRRRHQLTIHIRRLRGEVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARDLCATLSACGSAPLVEAVSLTGKGFDTVIVDEACQATEPSTLIPLSLGCIRLILVGDPRQLPATVISQRAARLNLEISLFERLESAG-HPVHMLTVQYRMHPEIRAFPSERFYDGRLTDAPCVRGEVNQPAAGVPLSSTEPTAVVVATSKPHRPPRPLGPCFPPFLVVDVTSGSERRVGSSYQNPWEASFVAAFLSRLVVSGLRDGRGIKSAGDSGGGTAAGSGTGSAGVIRVGVITPYRGQVQCIRQELGSSRRLKGGAEDGGV---EVEVSTVDGFQGKEVDVVLFSCVRAPSSLNTGYGGRGGGRGGIGFLADRRRMNVAITRAKRSLVVLGNTRRLSSDTTWKALVDHAKSRERLVSDMAD 2797
++ + P + M S ++ A H + G L+QGPPGTGKT+TILG+VSA+L G G+G F + G + GTK ++L+CAPSN A+DE+ RL G++DH G F P+I+R+G SE VK +L+ ++E+++ L+ K + M+VR+ + I + ALR+ ++ G P V + +R + ++QL + +R + +A R +++ + +I+ L+ +A+ +C+TLSA G L+++ G F +VI+DEA QA E S LIPL GC R I+VGDP QLP TV+S+ A++ SL+ R+ + +L++QYRMHPEI FPS FY RL D P ++ T++P P F + DV + + S NP EASFV +LV + + G +VG++TPYR Q+Q +R + RR G + V+ +TVDGFQG+E D++LFSCVR GGIGFL+D RR+NVA+TRAK SL ++GN L+ D W AL+ A++R LV+ D
Sbjct: 1257 LSLQPPQLKRVMESYHVNEPQALAIHAACARTGFTLVQGPPGTGKTKTILGIVSALLTSG------GQGRRFDA-------------------PGQNGNTQPGTK-----------------KVLICAPSNAAIDEILLRL---KDGIFDHEGIKFKPKILRVGY-SESINPHVKEFTLDEKMQEQMQVLNLKKNQDNGESMQVRKRHDEILKERDALRA------QLEKARNSGINDPAVEMKLREVMKTKNQLEQRLDDMRRQQGIAN-------RNMDIAKKQIQSQLLKDAEI--ICSTLSASGHDILLKS----GISFPSVIIDEAAQAVELSALIPLKYGCERCIMVGDPNQLPPTVLSKTASQNGYSESLYVRMHKQNPNSSFLLSIQYRMHPEISRFPSSYFYGSRLLDGPDMQK---------------------LTARPWH----HDPTFGIYRFFDVRTRESSSITKSVYNPEEASFVLTLYDKLVQDYIN----VDMEG------------------KVGIVTPYRRQLQELRMQF--ERRY------GPLIFKRVDFNTVDGFQGQEKDIILFSCVRGDMG------------GGIGFLSDTRRLNVALTRAKSSLYIIGNVGTLTKDKMWSALITDAQTRSCLVTSSID 1787
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Match: A0A2G5BIP1_COERN (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BIP1_COERN) HSP 1 Score: 243 bits (619), Expect = 1.600e-65 Identity = 209/638 (32.76%), Postives = 298/638 (46.71%), Query Frame = 0
Query: 2172 GVVLLQGPPGTGKTRTILGVVSAILARGEEKDVAGRGGSFGSGXXXXXXXXXXXSSAGVGNRGMGTTLEVGTKQKRPGLAGRWAAAKTHQRMLVCAPSNGAVDELTNRLALESGGVWDHRGKAFAPRIVRLGKPSEEAPGRVKGVSLEVMVEERVKLHAKSTEARNAEMKVREAYAHIEEAGRALRSGGADAGEIPGVAGIGTYIPCVRVYVR-LDTRRRH---QLTIHIRRLRGEVLVAKQRRRDALRGLEVERGRIRRSLVSNA-----------QARD-LCATLSACGSAPLVEAVSLTGKGFDTVIVDEACQATEPSTLIPLSLGCIRLILVGDPRQLPATVISQRAARLNLEISLFERLE-SAGHPVHMLTVQYRMHPEIRAFPSERFYDGRLTDAPCVRGEVNQPAAGVPLSSTEPTAVVVATSKPHRPPRPLGPCFPPFLVVDVTSGSERRVGSSYQNPWEASFVAAFLSRLVVSGLRDGRGIKSAGDSGGGTAAGSGTGSAGVIRVGVITPYRGQ----VQCIRQELGSSRRLKGGAEDGGVEVEVSTVDGFQGKEVDVVLFSCVRAPSSLNTGYGGRGGGRGGIGFLADRRRMNVAITRAKRSLVVLGNTRRLSSDTTWKALVDHAKSR 2788
G L+QGPPGTGKT+TILG+ A+L+ ++KD AA + ++L+CAPSN AVDE+ RL G+ D RG F PR+VR+G+ S+ V+ +L+ ++E+ L+A +T+A A+ + A R LR+ + + V +R LD++ + T +R +R + KQR++ + LE ER R R + + Q+ D LC TLS G L FDTVI+DEA Q+ E S LIPL C R +LVGDP QLP TV SQ A + SLF R++ +A V +L++QYRMHPEI A PS FY+ RL D P + + P HR R +PPF+ +++ SG E++ + + + V A + +LV +D + R+GVITPY+ Q V+ R+ G S A D +E +TVDGFQG+E D+++FSCVRA G G+GFLADRRRMNV +TRA++SL VLGN + L WK+L+D A +R
Sbjct: 6 GFTLIQGPPGTGKTKTILGLTGALLS--QDKD---------------------------------------------------AARTANNKLLICAPSNAAVDEIVKRL---KSGIRDSRGVTFKPRVVRVGQ-SDHISSTVRDTTLDFLMEQA--LNANTTQALGAKETRKSALGQQ----RTLRA----------------QLDEINVEIRELDSQMQRTDPSSTAALREMREKFHSVKQRKQRVCQQLEQERARAREASKAXXXXXXXXRMQILQSTDILCCTLSGSGHDMLTSLKC----AFDTVIIDEAAQSIELSCLIPLKYECNRCVLVGDPLQLPPTVFSQSATKHGYNKSLFVRVQQNAPESVSLLSIQYRMHPEISALPSRLFYNSRLKDGPEMAAKQCAPW--------------------HRNER-----YPPFVFLNIQSGREQK--GALHSVFNMQEVEAAV-QLVFGLCQDYPKLS------------------WKQRIGVITPYKQQLRKLVEAFRKHFGPS------ATDA---IECNTVDGFQGQEKDIIIFSCVRA-------------GEAGVGFLADRRRMNVGLTRARKSLFVLGNAKMLGGSPLWKSLIDDANTR 492
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Match: A0A061R4Q5_9CHLO (Senataxin n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R4Q5_9CHLO) HSP 1 Score: 245 bits (625), Expect = 4.710e-64 Identity = 216/648 (33.33%), Postives = 301/648 (46.45%), Query Frame = 0
Query: 2175 LLQGPPGTGKTRTILGVVS---------------AILA-----RGEEKDVAGRGGSFGSGXXXXXXXXXXXSSAGVGNRGMGTTLEVGTKQKRPGLAGRWAAAKTHQRMLVCAPSNGAVDELTNRLALESGGVWDHRGKAFAPRIVRLGKPSEEAPGRVKGVSLEVMVEERVKLHAKSTEARNAEMKVREAYAHIEEA---GRALRSGGADAGEIPGVAG--IGTYIPCVRVYVRLDTRRRHQLTIHIRRLRGEVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARDLCATLSACGSAPLVEAVSLTGKGFDTVIVDEACQATEPSTLIPLSLGCIRLILVGDPRQLPATVISQRAARLNLEISLFERLESAGHPVHMLTVQYRMHPEIRAFPSERFYDGRLTDAPCVRGEVNQPAAGVPLSSTEPTAVVVATSKPHRPPRPLGPCFPPFLVVDVTSGSERRVGS-SYQNPWEASFVAAFLSRLVVSGLRDGRGIKSAGDSGGGTAAGSGTGSAGVIRVGVITPYRGQVQCIRQELGSSRRLKGGAEDGGVEVEVSTVDGFQGKEVDVVLFSCVRAPSSLNTGYGGRGGGRGGIGFLADRRRMNVAITRAKRSLVVLGNTRRLSSDTTWKALVDHAKSRERLVSDMA 2796
L+QGPPGTGKT T+ G+++ A LA E + GR S SG SSA V +R + PG+ + R+LVCAPSN A DEL R+ + G G + P +VR+G + R + V ++ +V + + S + ++REA H+ G+ GAD + A + + V+L+ + T H RR R E LE+E LV NA+ + TLS+ G F+TV++DEACQA+E S L PL GC + +LVGDP+QLPATV+S +A +E SLFERL+ A PVHML VQYRMHPEIR FPS+ FY+G+L D C+ + P L P++ DV G E R+G S N EA AA L + L++ + + VGVITPYR Q C+++ S + G A+ G EV + TVD FQG+++DVV+ SCVRA SS R GIGF+ D RR+NVAITRA+ +L VLG+ L TW+AL++ A+ R R++ + +
Sbjct: 112 LIQGPPGTGKTHTVRGILNTWHLVQYQRYYTSLVACLAPKSKIAAEWRQSRGRNSSLNSGVQDIYSGQL--SSAEVDDRLL----------LLPGV-------EPQPRILVCAPSNAATDELLQRIM--NIGFRAGNGSMYWPNVVRVGSEAAPLSQRARDVWVDNIVNQYLSATDISAVISKRDERLREAQRHLGALCHHGQLALQPGADTDRLATEAAQIYDAWYKARQEVVKLNLVISYMQTQH-RRHRNE--------------LELE-------LVKNAEI--IFTTLSSSGRQIFSRLSERKCVKFETVLIDEACQASEVSVLQPLMYGCRKCVLVGDPQQLPATVLSLKAKEHQMERSLFERLQHASCPVHMLMVQYRMHPEIRHFPSDHFYEGKLQDGDCILQRXDPPFYSHSL-------------------------LKPYIFFDVDQGRELRMGGRSLSNQAEADLAAALYVALQKT-LKELEWSEP-------------------VSVGVITPYREQRNCLKKTFKS---VCGEAKAG--EVFIETVDSFQGRQLDVVMLSCVRASSS-----------RSGIGFVGDIRRLNVAITRAQLALWVLGDAATLGLSPTWRALIEDAERRRRIIPNAS 653
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Match: K3WEB8_GLOUD (TFIIS N-terminal domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEB8_GLOUD) HSP 1 Score: 254 bits (648), Expect = 1.640e-63 Identity = 233/725 (32.14%), Postives = 312/725 (43.03%), Query Frame = 0
Query: 2172 GVVLLQGPPGTGKTRTILGVVSAILA---------------------------RGEEKDVAGRGGSFGSGXXXXXXXXXXXSSA-------------GVGNRGMGTTLE-------VGTKQK------------RPGLAGRWAAAK----------THQRM----------------LVCAPSNGAVDELTNRLALESGGVWDHRGKAFAPR---------------IVRLGKPSEEAPGRVKGVSLEVMVEERVKLHAKSTEARNAEMKVREAYAHIEEAGRALRSGGADAGEIPGVAGIGTYIPCVRVYVRLDTRRRHQLTIHIRRLRGEVLVAKQRRRDALRGLEVERGRIRRSLVSNAQARDLCATLSACGSAPLVEAVSLTGKGFDTVIVDEACQATEPSTLIPLSLGCIRLILVGDPRQLPATVISQRAARLNLEISLFERLESAGHPVHMLTVQYRMHPEIRAFPSERFYDGRLTDAPCVRGEVNQPAAGVPLSSTEPTAVVVATSKPHRPPRPLGPCFPPFLVVDVTSGSERRVGSSYQNPWEASFVAAFLSRLVVSGLRDGRGIKSAGDSGGGTAAGSGTGSAGVIR----VGVITPYRGQVQCIRQELGSSRRLKGGAEDGGVEVEVSTVDGFQGKEVDVVLFSCVRAPSSLNTGYGGRGGGRGGIGFLADRRRMNVAITRAKRSLVVLGNTRRLSSDTTWKALVDHAKSRERLV 2792
G+ LLQGPPGTGKT+TI+G++S LA +GE + R S SG S+A GMG+ L G +K R L + +A K QR+ L+CAPSNGAVDEL R+ + G+ D GK R IVRLG P E+AP VK V L +++ + +H K+ + R+ ++E + LR D + P A G P R + + + + +RRLR EV R + G + R I + TLS GS PL S +GFD +IVDEA QA E STL+P+ R++LVGDP+QLPATV S AA + SLFER+ +G ML VQYRMHP +R FPS+RFY G LTD P V + + GV PCF PFL+ DVT+ SE + S N EA F + + A V + VG ++PY+ QV+ +R+E+ S + + +EV+TVDGFQG+E DV++FSCVRA RGGIGFL D RR+NVAITRA+ L V+G+ L D TW ALV A R+ ++
Sbjct: 1473 GISLLQGPPGTGKTKTIMGLLSGFLALRPPASAIIPSKNFKSSSSAASATAVPKGESSSMPPRAESTKSGFSNFQFGREIGSTAQPSPSSARPTFSLSAVTSGMGSILRRTDADPNTGPAKKTTIQALKNATTVRSRLEDKLSARKPSPSAPSSLVVRQRVISSNPTMRSVGKSCNVLLCAPSNGAVDELVLRIVTD--GLMDSTGKVTKVRAPSVHLEALSEDWLSIVRLGNPGEDAPDIVKSVCLPQIIKRELDIHPKALQLRS-----------LQETQQTLRKSIRDFHQKPKDASEG---PKSRKGLAQIHAQLTKCSGEVRRLRDEVFAI----RTKMTGAILSRASI------------IACTLSKSGSGPL----SGLQRGFDALIVDEAAQAVELSTLVPIRERVARVVLVGDPKQLPATVKSVVAANARYDRSLFERIAESGVAPSMLRVQYRMHPFLREFPSKRFYGGMLTDGPSVMERIQKVCPGVYKF----------------------PCFQPFLLYDVTNSSEEDMNGSKYNRIEAQFCIEICQNMFQT-------------------------CADVRKHNWSVGFVSPYKEQVRVLRREITRS------SIPSSISIEVNTVDGFQGREKDVIIFSCVRASR------------RGGIGFLKDIRRLNVAITRARFCLFVVGHVDTLVRDETWSALVRSADDRKLII 2096 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig122.41.397 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig122.41.397 ID=prot_P-littoralis_Contig122.41.397|Name=mRNA_P-littoralis_Contig122.41.397|organism=Pylaiella littoralis U1_48|type=polypeptide|length=3360bpback to top |