mRNA_P-littoralis_Contig94.130.10 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI) HSP 1 Score: 907 bits (2343), Expect = 1.040e-311 Identity = 465/693 (67.10%), Postives = 545/693 (78.64%), Query Frame = 2
Query: 377 MEARAPYSGDSVQAGGAAEPTTEPHA--SLNSSF------SSQTLEEVKRLLADRKPWPAFLHAGLAS-----DCPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTMLDIGALIRRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVNHVISHLVGVRKQSNLRCLIVLDDVWDPQMVPLFLRTGFHCLVTTRDLAVVPRRLRGTCTAVDMLTETEALELLKKASRAPSSIPRDEGLKVADDCGFLPLAVAIIGAMGSLRADPLSPETWKGVHARLVEEPTLVQDHVGGALAVSFRELNENARTRFRKLGVLVRGVWAPVDMVAHLWEQDLSDTILLMSDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLKGKVQLVTSRQAQYLGTTSVLEDYARAGEVLRGFYALIALWQSVEDISGDKQLEVSTYSVKLKALEGSEPTAGVAFTNWAAGRLFHLQGKYAEAEPLFERVQTIQEKLRGPEHPDVATSLNNRAELL 2416
M ARAP SG SVQAGG AEP T ++ L+ S+ S Q L+EV+RLLA RKPWPAF+ AGL + +CPE VGEAL WMAS VGLL++ASVGPL PVC+AF LI+AAEGA E + L EL+SWC+FL V ++HGK+ D+L P+ P+ FV+TT +LAKRAK + ARGKCTALLC RD KQ+Q+FD KLR IW+DIQG T+L + R LPPKT MA+VP+NA+ LPPAFVER DL +AVV +LVATDRAT AHVL G+PGGGKT+ A AVVRCEDVRRSF+DGIFWVQVGQVGTGNP+ALL+GLA DLAHAPS++PHTVPHEF DV H +SHL GVRK+ NLRCL+VLDDVWD Q+VPLFL GFH LVTTRDLAV+PR L+G CT V+MLT EALELLK ASRA ++IP +EGLKVA DCGFLPL +AI+GAMGS RADP S ETW+G+HA L +EP LVQD VG LAVSF L ARTRFRKLGVL +G APVDMVAHLWE D D+ LL+ DLVDKSLVKV E +YYLHDLVLDFAKDELRKLK +V+LVT RQAQYLG SV++DYA+AGEV+ GFYAL+ALW+SVED+SGD QLE STY +K E SE + VA+ WA GRLF LQGK+AEAE L++R Q I E+ GPEHP VAT+L+ RA L+
Sbjct: 1 MAARAPSSGGSVQAGGTAEPVTAEYSFGGLHCSWTTLGIGSGQMLQEVERLLASRKPWPAFVQAGLQARYEWNNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTSLIEAAEGAIEVAKNLEELVSWCSFLVGVFIEHGKQEDNLRPIAKPMKDFVATTIELAKRAKAMGARGKCTALLCHRRDGKQVQDFDVKLRHIWDDIQGVTLLAFYSDFRATLPPKTAYMARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLAHAPSHQPHTVPHEFVDVEHAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLVTTRDLAVIPRDLQGVCTEVEMLTNAEALELLKNASRATAAIPTNEGLKVAKDCGFLPLPLAIVGAMGSSRADPDSAETWRGIHALLQQEPELVQDPVGSVLAVSFCGLKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVMGGFYALMALWRSVEDLSGDNQLEASTYGATVKPSEESEASEDVAYLTWAVGRLFELQGKFAEAEELYDRCQAINEEALGPEHPSVATTLHGRAGLM 693
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE) HSP 1 Score: 758 bits (1958), Expect = 2.680e-263 Identity = 381/475 (80.21%), Postives = 413/475 (86.95%), Query Frame = 2
Query: 485 LEEVKRLLADRKPWPAFLHAGLASDCPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTMLDIGALIRRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVNHVISHLVGVRKQSNLRCLIVLDDVWDPQMVPLFLRTGFHCLVTTRDLAVVPRRLRGTCTAVDMLTETEALELLKKASRAPSSIPRDEGLKVADDCGFLPLAVAIIGAMGSLRADPLSPETWKGVHARLVEEPTLVQDHVGGALAVSFRELNENARTRFRKLGVLVRGVWAPVDMVAHLWEQ 1909
LEEV+R L RK WPAFLH A+ CPE+VGEALAWMASG VGLLNVASVGPL+P+CEAFKGLIQAAEGAAEADE LRELI+WCAFLT+VLLQHGKE+D LAPV PL FVSTTN+LAKRAK LA R KC ALLCF RD KQIQ+FDAKLR IW DIQG T+L + A R PPKTGEMAK+P NA LPPAFVERS LVEAV +L A +RAT+ A VL GIPGGGKTV AS+VVRCE+VRRSF+DGIFWVQVGQVGTGNP ALLKGLAEDLAHAPSNRP TVPHEFRDV HV+SHLVGV +Q NLRCL+VLD+VWD +MVPLFLRTGF CLVTTRD+A+VPR L GTCT VDMLTE EALELLKKASRA SSIPRDEGL+VADDCGFLPLA+AIIGAMGS R +P SPETW+GVHARLVEEP+LVQDHVGGALAVSFREL+E AR RFRKLGVL RGV APVDMVAHLWEQ
Sbjct: 9 LEEVQRHLEGRKKWPAFLHGEWANGCPEDVGEALAWMASGVVGLLNVASVGPLMPICEAFKGLIQAAEGAAEADENLRELIAWCAFLTDVLLQHGKEVDALAPVMKPLRDFVSTTNQLAKRAKRLATRRKCAALLCFARDGKQIQDFDAKLRSIWNDIQGVTILWVSAEFRAARPPKTGEMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPRTVPHEFRDVEHVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLVTTRDVAMVPRHLWGTCTPVDMLTEAEALELLKKASRATSSIPRDEGLEVADDCGFLPLAIAIIGAMGSSRVNPHSPETWRGVHARLVEEPSLVQDHVGGALAVSFRELSEKARARFRKLGVLARGVRAPVDMVAHLWEQ 483
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 473 bits (1218), Expect = 4.900e-143 Identity = 312/702 (44.44%), Postives = 404/702 (57.55%), Query Frame = 2
Query: 386 RAPYSGDSVQAGGAAEPTTEPHASLNSSFSSQTLEEVKRLLADRKPWPAFLHAGLASD-----CPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQ-----GHTMLDIGALIRRGLPPKTGEMAKVPQNARVLPPA-FVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVNHVISHLVGVRKQSNLRCLIVLDDVWDPQMVPLFLRTGFHCLVTTRDLAVVPRRLRGTCTAVDMLTETEALELLKKASRA---PSSIPRDEGLKVADDCGFLPLAVAIIGAMGSLRADPLSPETWKGVHARL--VEEPTLVQDHVGGALAV----SFRELNENARTRFRKLGVLVRGVWAPVDMVAHLWE-QDLSDTILLMSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLKGKVQLVTSRQAQYLGTTSVLEDYA--RAGEVLRGFYALIALWQSVEDISGDKQLEVSTYSVKLKALEGSEPTAGVAFTNWAAGRLFHLQGKYAEAEPLFERVQTIQEKLRGPEHPDVATSLNNRAELLQ 2419
RAP SG QAG AA EP + + L+ V +LLA++KPWPAFLH G + CP V EALAWM + AVG+L VASVGPLVPVCEAFK LI+AAEGAAE +KL+ L+S CAFL VL+QHG+ + LA V+ P+ FV TTN+LA A A GKC A C D + F+ LR+I DI H + AL LPP +MA VP A LP + +VER+ + E V + + T + + + G+ GGGK+V ASA VR VR F+ GIFWV+VG+ + LALL+GLA D+ AP++ PH VPH + V HL V L+VLDDVW+ ++V F+ GF L+TTRD +VV G DM TE EALELL+K S P R + KV CG LPL +AI G+M +R L+ W+ + L V + + ++ V SF L + F K+ VL G AP++M+ +LWE +D T LV K L+ V Y +HDLVL+FAK +R + V+ T+ QAQYLG VLE Y G +G + L ALW+SVE +SGD +LEV++Y L LE E T VA + W+ G LF++QGKYAEAEPL+ER IQEK+ GPEHPDVATSL+NRA LL+
Sbjct: 46 RAPASGG--QAGLAAAAVVEP-------TTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSL-LPPSLPDMAAVPTGALELPSSSYVERAAVQE--VADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPA-GRLELGDM-TEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLE 733
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 461 bits (1185), Expect = 2.590e-136 Identity = 306/696 (43.97%), Postives = 400/696 (57.47%), Query Frame = 2
Query: 386 RAPYSGDSVQAGGAAEPTTEPHASLNSSFSSQTLEEVKRLLADRKPWPAFLHAGLASD-----CPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQ-----GHTMLDIGALIRRGLPPKTGEMAKVPQNARVLPPA-FVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVNHVISHLVGVRKQSNLRCLIVLDDVWDPQMVPLFLRTGFHCLVTTRDLAVVPRRLRGTCTAVDMLTETEALELLKKASRA---PSSIPRDEGLKVADDCGFLPLAVAIIGAMGSLRADPLSPETWKGVHARL--VEEPTLVQDHVGGALAV----SFRELNENARTRFRKLGVLVRGVWAPVDMVAHLWE-QDLSDTILLMSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLKGKVQLVTSRQAQYLGTTSVLEDYA--RAGEVLRGFYALIALWQSVEDISGDKQLEVSTYSVKLKALEGSEPTAGVAFTNWAAGRLFHLQGKYAEAEPLFERVQTIQEKLRGPEHPDVATSLNN 2401
RAP SGD QAG AA EP + + L+ V +LLA++KPWPAFLH G + CP V EALAWM + AVG+L VASVGPLVPVCEAFK LI+AAEGAAE +KL+ L+S CAFL VL+QHG+ + LA V+ P+ FV+TTN+LA A A GKC A C D + F+ LR+I DI H + AL LPP +MA VP A LP + +VER+ V+ V L A + + V+ G+ GGGK+V ASAVVR VR F+ GIFWV+VG+ + LALL+GLA D+ AP++ P VP + V HL V + L+VLDDVW+ ++V F+ GF L+TTRD +VV + + +TE EALELL+K S A P R + KV CG LPL +AI G+M +R L+ W+ + L V + + ++ V SF L + F K+ VL G AP++M+ +LWE +D T LV K L+ V Y +HDLVL+FAK +R + V+ T+ QAQYLG VLE Y G +G + L ALW+SVE +SGD LEV++Y L+ LE E T VA + + G LF++Q KYAEAEPL+ER + IQEK+ GPEHP VATSLNN
Sbjct: 29 RAPASGD--QAGLAAAAVVEP-------TTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSL-LPPSLPDMAAVPAGALELPSSSYVERA-AVQEVADGLTAPEESRAPYTVV-GMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVG--VPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSLNN 710
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 432 bits (1111), Expect = 5.120e-134 Identity = 291/700 (41.57%), Postives = 381/700 (54.43%), Query Frame = 2
Query: 485 LEEVKRLLADRKPWPAFLHAGLASD-----CPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQ-----GHTMLDIGALIRRGLPPKTGEMAKVPQNARVLP-PAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVNHVISHLVGVRKQSNLRCLIVLDDVWDPQMVPLFLRTGFHCLVTTRD--LAVVPRRLRGTCTAVDMLTETEALELLKKASRA---PSSIPRDEGLKVADDCGFLPLAVAIIGAMGSLRADPLSPETWKGVHARLVEEPTLVQ------DHVGGALAVSFRELNENARTRFRKLGVLVRGVW-----------------------------APVDMVAHLWE-QDLSDTILLMSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLKGKVQLVTSRQAQYLGTTSVLEDYA--RAGEVLRGFYALIALWQSVEDISGDKQLEVSTYSVKLKALEGSEPTAGVAFTNWAAGRLFHLQGKYAEAEPLFERVQTIQEKLRGPEHPDVATSLNNRAELLQ 2419
LE V +LLA+++PWPAFLH + CP EAL W+A+ VG+L+VASVGPLVPVCEAFK LI+AAEGAAE+ KL+ L+S CAFL VL+QHG+ + LA V P+ FV TTN LA A A GKC A C D + +F+ LR+I DI H + AL LPP +MA VP A LP ++VER+ + E V + + + + + G+ GGGK+V ASAVVR VR F+ GIFWV+VG+ + LALL+GLA ++ A ++ PHTVPH + V HL V L+VLDDVW+ ++V F+ GF L+TTRD + VVP G DM TE EALELL+K+S A P R + KV CG LPL +AI G+M ++ L+ WK + L ++ + L SF L + F KL VL AP++M+ +LWE +D T LV K L+ V Y +HDLVL++AK +R V+ VT+ QA +LG VL+ Y G + + L ALW+SVE +SGD +LEV ALE E T VA + W+ G LF++QGKYAEAEPL+ER Q IQE + GPEHPDV TSLNNRA LL+
Sbjct: 16 LERVGKLLAEKRPWPAFLHIEARATEEWEACPTVAQEALTWIATATVGVLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSL-LPPSLPDMAAVPAGALELPCSSYVERAAVQE--VADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPA---GRLEVGDM-TEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEV--------ALESCEATEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLE 700
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 429 bits (1104), Expect = 1.230e-127 Identity = 273/672 (40.62%), Postives = 366/672 (54.46%), Query Frame = 2
Query: 485 LEEVKRLLADRKPWPAFLHAGLAS-----DCPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTMLDIGALI----RRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVNHVISHLVGVRKQSNLRCLIVLDDVWDPQMVPLFLRTGFHCLVTTRDLAVVPRRLRGTCTAVDMLTETEALELLKKASRAPSSIPRDEGLKVADDCGFLPLAVAIIGAMGSLRADPLSPETWKGVHARLVEEPTLVQDHVGG------------------ALAVSFRELNENARTRFRKLGVLVRGVWAPVDMVAHLWEQDLSDTILLMSDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLKGKVQLVTSRQAQYLGTTSVLEDYARAGEVLRGFYALIALWQSVEDISGDKQLEVSTYSVKLKALEGSEPTAGVAFTNWAAGRLFHLQGKYAEAEPLFERVQTIQEKLRGPEHPDVATSLNNRAELLQ 2419
LEEV+ LLA++KPWPAFL A + + DCPE +AL WMAS AVGLL++ASVGPL+PVC+AF LI+AA+GA E E LREL++WCAFL V ++HGK++D+L + PL VSTT +LAKRAK +A RGKCTAL C +D K I FDAKLR++W DI+G +LDI ++ R P MA VP A LPP+ V+R L +V+ L ATD + GI W++VG+VG AL + L A +P F +I +L + + L L+VLDDVW+ +V TG LVTTR +VV +RG T V + EA ELLK S A ++P+ E +VA CG+ L +AI G++ ++ DP S TW+ RL E T ++ V G L +S L + F L VL RGV AP M+A +W++D V SL++ V+ S+ LHDL+LDF + K + RQ+QYLG +VL+DY G+ L GFY+LI LW+ + ++ G KQLEV Y L L G + + G + A GRL L+G +AEA+P R I EK+ GPEHPD+A LNNRAELL+
Sbjct: 62 LEEVETLLANKKPWPAFLRAAVETRGEWDDCPEGATDALEWMASTAVGLLDIASVGPLIPVCKAFTALIEAAQGATEVVENLRELVTWCAFLVGVFIEHGKQVDNLQKIAKPLNELVSTTGELAKRAKVVAGRGKCTALFCHKKDAKTIASFDAKLRRLWTDIRGLAILDIQQIVIRLEERSRPVPVPGMADVPAAALKLPPSHVKRVGLEAEIVNSLTATDAS----------------------------------GISWLRVGRVGEDQLQALFEALTRGAFPAAK-----LPPRFNSPEEIIQYLTVLVAEDKLPRLVVLDDVWERAVVDTLRPTGLRLLVTTRLDSVVA--MRGGRTTVGNMDGGEARELLKSRSGA-IALPKTEADQVAAACGWHALTLAIAGSLRFVKDDPNSASTWR----RLASEMTQTKNSVRGPKMDADIGDDPTKKSLFPVLELSLESLGGDRERLFLSLLVLARGVSAPAPMLASIWDKDDMGARNEADFFVSNSLLQEVDSSFRLHDLLLDFVRTRCEK--KIIDEAVKRQSQYLGRLAVLQDYEAKGDSLEGFYSLIVLWRKLAELCG-KQLEVEVYHASLGKL-GDDVSTGASDAFSAVGRLHELEGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLR 683
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 436 bits (1122), Expect = 6.850e-126 Identity = 282/674 (41.84%), Postives = 383/674 (56.82%), Query Frame = 2
Query: 479 QTLEEVKRLLADRKPWPAFLHAGLASD-----CPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTMLDIGALIRRGLP----PKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVNHVISHLVGVRKQSNLRC-LIVLDDVWDPQMVPLFLRTGFHCLVTTRD--LAVVPRRLRGTCTAVDM--LTETEALELLKKASRA---PSSIPRDEGLKVADDCGFLPLAVAIIGAMGSLRADPLSPETWKGVH------ARLVEEPTLVQDHVGGALAVSFRELNENARTRFRKLGVLVRGVWAPVDMVAHLWE-QDLSDTILLMSDLVDKSLVKVV-EQSYYLHDLVLDFAKDELRKLKGKVQLVTSRQAQYLGTTSVLEDYA--RAGEVLRGFYALIALWQSVEDISGDKQLEVSTYSVKLKALEGSEPTAGVAFTNWAAGRLFHLQGKYAEAEPLFERVQTIQEKLRGPEHPDVATSLNNRAELLQ 2419
+ LE V +LLA+++PWPAFLH G + CP EAL WM + AVG+L+VASVGPLVPVC+A K LI+AAEGAAE ++K++ L+S CAFL VL+QHG+ + LA V P+ FV TTN+LA A A GKC A C D + F+ LR I DI L+ L LP P+ +MA VP A LP +VER+ V+ V L A + V+ G+ GGGK+V ASAVVR VR F+ GI WV+VG+ + L LL+GLA ++ AP++ PH VP + V HL V + L+VLDDVW+ ++V + GF L+TTRD + VVP R +D+ +TE EALELL+K S P R + KV CG LPL +AI G+M +++ L+ W+ + A+ + + L SF L + F ++ VL G AP++M+ +LWE +D T LV+K L+ V + Y +HD+VL+FAK +R + V+ T+ QAQ+LG VL+ Y G RG + L +LW+SVE +SGD +LEV+TY L+ LE + T +A + A G LF Q KY EAEPL ER Q +QEK+ GPEHP VA SLNNRA+LL+
Sbjct: 26 ERLEHVGKLLAEKRPWPAFLHIGARATEEWEACPTLAQEALTWMTTAAVGVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERA-AVQEVADGLTAPEEPRAPYTVV-GLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPAR------RLDLGDMTEEEALELLRKTSGTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSLNNRADLLR 691
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI) HSP 1 Score: 373 bits (957), Expect = 1.450e-105 Identity = 269/700 (38.43%), Postives = 360/700 (51.43%), Query Frame = 2
Query: 386 RAPYSGDSVQAGGAAEPTTEPHASLNSSFSSQTLEEVKRLLADRKPWPAFLHAGLASD-----CPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDI------QGHTMLDIGALIRRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVNHVISHLVGVRKQSNLRCLIVLDDVWDPQMVPLFLRTGFHCLVTTRDLAVVPRRLRGTCTAVDMLTETEALELLKKASRAPSSIPRDEGLKVADDCGFLPLAVAIIGAMGSLRADPLSPETWKGVHARL---------VEEPTLVQDHVGGALAVSFRELNENARTRFRKL--GVLVRGVWAPVDMVAHLWEQDLSDTILLMSDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLKGKVQLVTSRQAQYLGTTSVLEDYARAGEVLRGFYALIALWQSVEDISGDKQLEVSTYSVKLKALEGSEPTAGVAFTNWA-AGRLFHLQGKYAEAEPLFERVQTIQEKLRGPEHPDVATSLNNRAELL 2416
RAP SG A EPT +++ L+ V +LLA++KPWPAFLH G + CP V EAL WMA VG+L++ASVGPL PVC+AFKGLI+AAEGAAE+ +KL+ LIS CAFLT VL+QH + + LA V+ P+ FV+TTN LA A T A GKC AL C DR + +F+ LR I DI + H +L A+ R+ PP MA VP L + R L+ + L T + VL G+ G GK+V ASAVVR E VR F G+FWV+ A L+G A +A T V V +L V S L+VLDDVW+ ++V TG LVTTRD +VV + G C V + E EALE+L+ A ++ LP A A+ G P P++W+ +H L + V V L VS + ++ + R L VL G AP DM+ LW++ T + LVD+S+++ ++ +HDLVL F K +L+ + + TSR A+YLG VL Y GE G YAL+ALW+SVED+ G+ ++ + Y L+ + P W AGR+ L GKYAEA+PL+ R I E GP+HP +AT LNNRA LL
Sbjct: 3 RAPTSGGQAGLVAAVEPT-----------AAERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALVWMARATVGVLDIASVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLL--AVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNT-AVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRARDA-KDQLHACLEGFALRVASTSG----TTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVS--MPGECVEVGDMEEDEALEVLRVGCGASKNLE-------------LPRAEALQGP-------PQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPNR-PIATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRV-AAVYMNNLQGVPEHAP--------WRQAGRVLELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLL 651
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE) HSP 1 Score: 345 bits (885), Expect = 1.770e-101 Identity = 260/697 (37.30%), Postives = 359/697 (51.51%), Query Frame = 2
Query: 377 MEARAPYSGDSVQAGGAAEPTTEPHASLNSSFSSQTLEEVKRLLADRKPWPAFLHAGLA-----SDCPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTMLDIGALIRRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVNHVISHLVGVRKQSNLRCLIVLDDVWDPQMVPLFLRTGFHCLVTTRDLAVVPRRLRGTCTAVDMLTETEALELLKKASRAPSSIPRDEGLKVADDCGFLPLAVAIIGAMGSLRADPLSPETWKGVHARLVEEPTLVQDHVGGALAVSFRELNENA---RTRFRKLGVLVRGVWAPVDMVAHLWEQDLSDTILLMSDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLKGKVQLVTSRQAQYLGTTSVLEDYARAGEVLRGFYALIALWQSVEDISGDKQLEVSTYSVKLKALEGSEPTAGVAFTNWAAGRLFHL--------QGKYAEAEPLFERVQTIQEKLRGPEHPDVATSLNNRAELLQ 2419
M ARAP SVQAG AA PTT + LEEV+ LLA +KPWPAFL AG+ +CPE +AL WMAS AVGLL++ASVGPL PVC+AF LI+AA+GA E + LREL++WCAFL VL++HGK++++L V PL FV+TT +LAKRA +A RGK + R P +MA VP A LPP+ V+R L ++ L TD A+ +VL G+ G GK++ AS+VVR E+VR+ F+ G FW++VG G AL LA + A +P +F + +I HL V + L L+VLDDV + +V TG LVTTR ++V +RG T V + EA ELLK S A +P E + G P A IG D + E+ V ++ Q + +L V R ++ A + + +G+ V ++ V ++ ++ +D V SL++ V+ S+ +HDL+LDFA+ K + RQ+QYL +VL+DY G+ L G Y+LI LW+ + + G++Q+EV Y L L G + +AG A A GRL L QGK EA PL++R I E GPEH VAT+LNNRA LL+
Sbjct: 1 MAARAPSDVSSVQAGAAAAPTTP-----------ERLEEVETLLAYKKPWPAFLCAGVDVHGEWDNCPEGARDALEWMASTAVGLLDIASVGPLTPVCKAFTALIEAAQGAMEVVKNLRELVTWCAFLVGVLIEHGKQVENLKAVNKPLNEFVATTGELAKRANVVAGRGK--------------------------------------MEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTTTD-ASGAPYVLLGVGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLFALCDILARKVTPATK-----LPQQFNSLEDIIQHLTVVVAEDRLPRLMVLDDVLERAVVDTLRPTGLRLLVTTRLDSLVA--VRGGRTVVGNMDRAEARELLKSKSGA-IELPETEADQTKTILG--PQMDADIG-------DNPTKESLFHVLDLSLKYLGRHQHRLFLSLVVLARGVSAPAPMLASIWDMVGLCVIKCATSLEKVDNMGARNEADFF------VSNSLLQEVDGSFRVHDLLLDFARTRCEK--EILDEAVKRQSQYLRRLAVLQDYRAKGDPLEGLYSLIVLWRKLAEHCGNEQVEVEAYHASLGEL-GDDESAGAADAFSAVGRLLGLETHLYVSFQGKLDEAGPLYDRAIRIWEAALGPEHSQVATALNNRARLLR 621
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Match: A0A6H5KK53_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK53_9PHAE) HSP 1 Score: 323 bits (828), Expect = 9.110e-97 Identity = 201/430 (46.74%), Postives = 260/430 (60.47%), Query Frame = 2
Query: 377 MEARAPYSGDSVQAGGAAEPTTEPHASLNSSFSSQTLEEVKRLLADRKPWPAFLHAGLA-----SDCPENVGEALAWMASGAVGLLNVASVGPLVPVCEAFKGLIQAAEGAAEADEKLRELISWCAFLTEVLLQHGKELDDLAPVRNPLVAFVSTTNKLAKRAKTLAARGKCTALLCFWRDRKQIQEFDAKLRKIWEDIQGHTMLDIGALI----RRGLPPKTGEMAKVPQNARVLPPAFVERSDLVEAVVHELVATDRATEKAHVLHGIPGGGKTVTASAVVRCEDVRRSFQDGIFWVQVGQVGTGNPLALLKGLAEDLAHAPSNRPHTVPHEFRDVNHVISHLVGVRKQSNLRCLIVLDDVWDPQMVPLFLRTGFHCLVTTRDLAVVPRRLRGTCTAVDMLTETEALELLKKASRAPSSIPRDEGLKV 1639
M ARAP SG SVQAG AA PTT + LEEV+ LLA +KPWPAFL AG+ +CPE +AL WMAS AVGLL+VASVGPL PVC+AF LI+AA+GA E E LREL++WCAFL VL++HGK++D+L V PL FV+TT +LAKRA +A R KC A LC +D K + FD KLR+ W DIQG +LDI ++ R P +MA VP A LPP+ V+R L ++ L ATD A+ +VL G+ G GK++ AS+VVR E+VR+ F+ G FW++VG G AL +GLA LA + +P F + +I HL + + L L+VLDDVW+ +V + TG LVTTR +VV +RG T V + EA ELLK S A ++P E +V
Sbjct: 1 MAARAPSSGSSVQAGAAAAPTTP-----------ERLEEVETLLAYKKPWPAFLCAGVDVHGEWDNCPEGARDALEWMASTAVGLLDVASVGPLTPVCQAFTALIEAAQGAMEVVENLRELVTWCAFLVGVLIEHGKQVDNLKAVNKPLNEFVATTGELAKRANVVAGRSKCMAFLCHKKDAKMMASFDDKLRRFWTDIQGLAVLDIQEIVTRMEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTATD-ASGAPYVLLGMGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLQALFEGLAR-LAIPEAK----LPQRFNSLEEIIQHLTVLVAEDKLPRLVVLDDVWERAVVDILRPTGLRLLVTTRLDSVVA--VRGGRTVVGNMATGEARELLKSKSGA-ITLPETEADQV 410 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig94.130.10 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig94.130.10 >prot_P-littoralis_Contig94.130.10 ID=prot_P-littoralis_Contig94.130.10|Name=mRNA_P-littoralis_Contig94.130.10|organism=Pylaiella littoralis U1_48|type=polypeptide|length=977bp MEARAPYSGDSVQAGGAAEPTTEPHASLNSSFSSQTLEEVKRLLADRKPWback to top mRNA from alignment at P-littoralis_Contig94:580981..586295- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig94.130.10 ID=mRNA_P-littoralis_Contig94.130.10|Name=mRNA_P-littoralis_Contig94.130.10|organism=Pylaiella littoralis U1_48|type=mRNA|length=5315bp|location=Sequence derived from alignment at P-littoralis_Contig94:580981..586295- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig94:580981..586295- >mRNA_P-littoralis_Contig94.130.10 ID=mRNA_P-littoralis_Contig94.130.10|Name=mRNA_P-littoralis_Contig94.130.10|organism=Pylaiella littoralis U1_48|type=CDS|length=2931bp|location=Sequence derived from alignment at P-littoralis_Contig94:580981..586295- (Pylaiella littoralis U1_48)back to top |