mRNA_P-littoralis_Contig915.18.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig915.18.2
Unique NamemRNA_P-littoralis_Contig915.18.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: D7FT92_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT92_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 6.520e-73
Identity = 223/256 (87.11%), Postives = 235/256 (91.80%), Query Frame = 1
Query:    1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSVS 768
            ME+V++LVPHPD NGLLNLT              KREL+ LNVSFNNIEYLPPELGDLVLLKEL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLD+VP +LHS+TAMILWVCRLHKDH++DA+QL+ LNDALE KAQKIEETKLRLKEEIR+LQEQRRALLKERPGAYLAAKRKVD TVSKVCSVS
Sbjct:    1 MEEVDELVPHPDSNGLLNLT--------------KRELIVLNVSFNNIEYLPPELGDLVLLKELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDVVPAALHSDTAMILWVCRLHKDHAEDAEQLQRLNDALENKAQKIEETKLRLKEEIRILQEQRRALLKERPGAYLAAKRKVDATVSKVCSVS 242          
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A2P4YKA4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YKA4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.530e-22
Identity = 133/255 (52.16%), Postives = 169/255 (66.27%), Query Frame = 1
Query:    1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
            MED+ D    PD+NG+L+L  + WV LD V+W+    L+ LNVS N + ++   +G+L LL+EL                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LEE+ C GN  L  +PESL SNT ++LW+C   K H  +  +L  +N  LE+ A+  +E +L+L+EEI  LQ ++++L  ERP  YL  K++V+   S+VCSV
Sbjct:    1 MEDLADASLTPDENGILDLQDKHWVTLDEVVWSYAHSLLVLNVSRNQLVHISEAVGNLNLLRELLLANNRISSIPVQIARCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPVLEEVGCEGNEGLTDIPESLRSNTKLVLWICSTVKRHRTEVAELVEINSELERMARLGDEERLKLREEIADLQRKKKSLEDERPHNYLFMKKQVERITSEVCSV 255          
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: H3H307_PHYRM (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3H307_PHYRM)

HSP 1 Score: 100 bits (249), Expect = 8.870e-21
Identity = 147/255 (57.65%), Postives = 179/255 (70.20%), Query Frame = 1
Query:    1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
            MED+ D    PD+NG+L+L  + WV LD V+W     L+ LNVS N + ++   +G+L LL+EL      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LEE+ C GN  L  +PESL SNT ++LW+C   K H  +  +L  +N  LE+ A+  +E +L+L+EEI  LQ ++R L  ERP  YL  K+ V    S+VC+V
Sbjct:    1 MEDLVDASLIPDENGILDLQDKHWVTLDEVVWAYAHSLLVLNVSRNQLVHISEAIGNLDLLRELLLANNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPLLEEVGCEGNDGLTDIPESLRSNTKLVLWICSTVKRHRGEVAELVEINSELERMARLGDEERLKLREEIADLQRKKRILEDERPHNYLFVKKHVARITSEVCNV 255          
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A6A3JPH2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3JPH2_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 3.210e-20
Identity = 148/255 (58.04%), Postives = 182/255 (71.37%), Query Frame = 1
Query:    1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
            ME++ D    PD+NG+L+L  + WV LD V+WT    L+ LNVS N + ++   +G+LVLL+EL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LEE+ C GN  L  +PESL SNT ++LW+C   K H     +L  +N  LE+ A+  +E +L+L+EEI   Q +++AL  ERP  YL  K+ V    S+VC++
Sbjct:    1 MEELVDASLTPDENGILDLQDKHWVTLDEVVWTYAHSLLVLNVSRNQLVHISEAVGNLVLLRELILANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPLLEEVCCEGNDGLTDIPESLRSNTKLVLWICSTVKRHRGQVAELVEINSELERMARLGDEERLKLREEIADQQRKKKALEDERPHNYLFVKKHVVRITSEVCNL 255          
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A225UQY5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UQY5_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 8.420e-20
Identity = 142/255 (55.69%), Postives = 176/255 (69.02%), Query Frame = 1
Query:    1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
            MED+ D    PD+NG+L+L    WV LD ++WT    L+ LNVS N +  +   +G+L  L+EL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX     LEE+ C GN  L  +PESL SNT ++LW+C   K H  +  +L  +N  LE+ A+  +E +L+L+EE+  LQ +R+ L  ERP  YL  K++V    S+VC++
Sbjct:    1 MEDLVDASLTPDENGILDLQDNHWVTLDEIVWTYSHSLLVLNVSRNQLVQISEAIGNLTHLRELLMANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSYNDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDCPLLEEVGCEGNEGLTDIPESLRSNTKLVLWICSTVKRHRTEVAELIEINTELERMARLGDEERLKLREELADLQRKRKKLEDERPHNYLFMKKQVVRLTSEVCAI 255          
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A836CI12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI12_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.830e-19
Identity = 41/64 (64.06%), Postives = 54/64 (84.38%), Query Frame = 1
Query:    1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKEL 192
            ME+ ++L+PHPDK G L+LTHR+WV LDSV+WT  +EL+ LN++FNNIE LPPELG L LL++L
Sbjct:    1 MEEYDELIPHPDKAGCLDLTHRSWVELDSVLWTFSKELLVLNIAFNNIERLPPELGHLTLLRDL 64          
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A8J5JBD1_9STRA (AAA domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JBD1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 7.470e-19
Identity = 149/255 (58.43%), Postives = 184/255 (72.16%), Query Frame = 1
Query:    1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
            MED+ D    PD+NG+L+L  + WV LD V+WT    L+ LNV+ N + ++   +G+L LL+EL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LEE+ C GN  L  +PESL SNT ++LW+C   K H  +  +L  +N  LE+ A+  +E +L+L+EEI  LQ +++ L  ERP  YL  K+ V    S+VC++
Sbjct:    1 MEDLVDASLIPDENGILDLQDKHWVTLDEVVWTYAHALLVLNVARNQLVHISESVGNLELLRELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPLLEEVGCEGNEGLIDIPESLRSNTKLVLWICSTVKRHRAEVSELVEINSELERMARLGDEERLKLREEITNLQRKKKVLEDERPHNYLFVKKHVVRVTSEVCNL 255          
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A8K1C3I3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3I3_PYTOL)

HSP 1 Score: 94.4 bits (233), Expect = 1.500e-18
Identity = 137/255 (53.73%), Postives = 175/255 (68.63%), Query Frame = 1
Query:    1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
            ME+  D    PD NG+L+L  + WV LD ++W+  + L+ L VS N + ++PP++ +LVLL+ELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           X  XXXXXXXXXXXXXXXXXXXXXXXXXXXX     LEE+ C  N  L  +PESL  NT ++LW+C   K H  +  +L ++N  LE+ A+  +E +L+L+++I  LQ ++ AL  ERP  YL  K  V    S+VC++
Sbjct:    1 MEEFFDDSLVPDANGILDLQEKHWVTLDEIVWSFGQSLLVLIVSRNQLVHIPPDVANLVLLRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEIIDASYNEXATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAKLEEVVCDENPQLQDIPESLRDNTKLVLWICGTMKQHRAEVDELVAINTELERMARLSDEERLQLRQQIATLQREKAALEAERPHHYLFVKHHVLRVSSQVCTL 255          
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A3R7J8U7_9STRA (DNA helicase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J8U7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.340e-18
Identity = 145/255 (56.86%), Postives = 182/255 (71.37%), Query Frame = 1
Query:    1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
            ME++ D    PD+NG L+L  + WV LD V+WT    L++LNVS N + ++P  +G+L LL+EL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        L+E+ C GN  L  +PESL SNT ++LW+C   K H  +  +L  +N  LE+ A+  +E +L+L+ EI  LQ +++ L  ERP  YL  K+ +    S+VC++
Sbjct:    1 MEELVDASLIPDENGTLDLQDKHWVTLDEVVWTYAHSLLTLNVSRNQLVHIPEAVGNLDLLRELILANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPALQEVGCEGNDGLTDIPESLRSNTKLVLWICGTVKRHRAEVTELVDINSELERMARLGDEERLKLRGEITDLQRRKKTLEDERPHNYLLVKKHILHVTSEVCAL 255          
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A2D4C0D4_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0D4_PYTIN)

HSP 1 Score: 92.4 bits (228), Expect = 1.660e-16
Identity = 143/260 (55.00%), Postives = 183/260 (70.38%), Query Frame = 1
Query:    1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKV----DETVSKVCSVS 768
            ME++ D    PD NG+L+L  + WV LD V+W+  + L+ LNV+ N + ++PP++G+L LL+EL    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LE + C  N DL  +PESL  NT ++LW+C   K H    ++L  +N  LE+ A+  +E +L+L++EI  L  ++ AL  ERP  YL  KR++     + + + CS +
Sbjct:  684 MEELLDDSLQPDANGVLDLQDKHWVTLDEVVWSFSQSLLVLNVARNQLVHVPPDVGNLHLLRELLLSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPQLERVSCQENPDLADIPESLRENTKLVLWICGTMKQHRAQVQELVGINAELERLARLSDEERLQLRQEIARLSREKAALEAERPHHYLFVKRQLHRVSSQELKRACSTA 943          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D7FT92_ECTSI6.520e-7387.11Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A2P4YKA4_9STRA2.530e-2252.16Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
H3H307_PHYRM8.870e-2157.65Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]
A0A6A3JPH2_9STRA3.210e-2058.04Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A225UQY5_9STRA8.420e-2055.69Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A836CI12_9STRA1.830e-1964.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J5JBD1_9STRA7.470e-1958.43AAA domain-containing protein n=1 Tax=Phytophthora... [more]
A0A8K1C3I3_PYTOL1.500e-1853.73Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7J8U7_9STRA4.340e-1856.86DNA helicase n=4 Tax=Phytophthora kernoviae TaxID=... [more]
A0A2D4C0D4_PYTIN1.660e-1655.00DNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig915contigP-littoralis_Contig915:45910..49693 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FT92
PFAMsLRR_8,NB-ARC
Model size1140
Max annot lvl2759|Eukaryota
KEGG koko:K19613,ko:K22038
KEGG TC1.A.25.3
KEGG Pathwayko04014,map04014
Hectar predicted targeting categoryother localisation
Exons7
Evalue2.47e-75
EggNOG OGsCOG4886@1|root,KOG0619@2759|Eukaryota
Descriptionregulation of response to stimulus
Cds size771
COG categoryU
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig915.18.2prot_P-littoralis_Contig915.18.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig915 46279..49693 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791825.3290675-UTR-P-littoralis_Contig915:45909..462781680791825.3290675-UTR-P-littoralis_Contig915:45909..46278Pylaiella littoralis U1_48UTRP-littoralis_Contig915 45910..46278 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791825.342196-CDS-P-littoralis_Contig915:46278..463171680791825.342196-CDS-P-littoralis_Contig915:46278..46317Pylaiella littoralis U1_48CDSP-littoralis_Contig915 46279..46317 -
1680791825.3587573-CDS-P-littoralis_Contig915:46785..468661680791825.3587573-CDS-P-littoralis_Contig915:46785..46866Pylaiella littoralis U1_48CDSP-littoralis_Contig915 46786..46866 -
1680791825.3691502-CDS-P-littoralis_Contig915:47394..474861680791825.3691502-CDS-P-littoralis_Contig915:47394..47486Pylaiella littoralis U1_48CDSP-littoralis_Contig915 47395..47486 -
1680791825.387465-CDS-P-littoralis_Contig915:48004..482391680791825.387465-CDS-P-littoralis_Contig915:48004..48239Pylaiella littoralis U1_48CDSP-littoralis_Contig915 48005..48239 -
1680791825.4008555-CDS-P-littoralis_Contig915:48614..487531680791825.4008555-CDS-P-littoralis_Contig915:48614..48753Pylaiella littoralis U1_48CDSP-littoralis_Contig915 48615..48753 -
1680791825.4116251-CDS-P-littoralis_Contig915:49227..493111680791825.4116251-CDS-P-littoralis_Contig915:49227..49311Pylaiella littoralis U1_48CDSP-littoralis_Contig915 49228..49311 -
1680791825.425011-CDS-P-littoralis_Contig915:49592..496931680791825.425011-CDS-P-littoralis_Contig915:49592..49693Pylaiella littoralis U1_48CDSP-littoralis_Contig915 49593..49693 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig915.18.2

>prot_P-littoralis_Contig915.18.2 ID=prot_P-littoralis_Contig915.18.2|Name=mRNA_P-littoralis_Contig915.18.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=257bp
MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEY
LPPELGDLVLLKELDVSCNKLETLPLEVGKCIRLRKLRANGNHMEEIPTE
LGHCSLLEELVLSENKIQEVPESLAHLKALRILRLQNNRLKTLPHELGAV
ITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLND
ALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVS
KVCSVS*
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mRNA from alignment at P-littoralis_Contig915:45910..49693-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig915.18.2 ID=mRNA_P-littoralis_Contig915.18.2|Name=mRNA_P-littoralis_Contig915.18.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3784bp|location=Sequence derived from alignment at P-littoralis_Contig915:45910..49693- (Pylaiella littoralis U1_48)
ATGGAAGATGTCGAAGATCTTGTGCCACATCCAGACAAGAATGGCCTCTT GAATCTCACGCACAGAGCTTGGGTGCTCCTGGATAGTGTTATATGGACCA TGTGAGCTTCCACCATTGTTGTGCTTCGAAGAATGCACCACATCCGGTTT CGATGTTTCCCCCGTGTTTTTATTCGAACAGTAGTCCAAGCAGTGTTCAT GCAGCTCGCAGCTCGCGCGAAAATATAACTCAGCACGATCTAATAAAAAC CAACGGCAAATAAATGTATTAACCCCAACGAGTGTATGAACTACATGCTG TGACATCACGTGTATGATACTGAGTATCGCACTCGTGTCTTTTCCTTTAT CCGGGGTTTCCGGGGGTGAATCCTGGGCGCAGGAAACGAGAGCTCGTCTC CCTCAATGTATCGTTCAACAACATTGAGTACCTTCCTCCTGAGCTTGGAG ACCTCGTCCTTCTCAAGTGAGCCCGCCAGATCGACCTGCAGTCACTCCTG TACGTTGTTAACTCACATTGAACACGAGTGGTATCACAACACAGCGCATA ATTGTTGTGTCAGCCTCACGACTGTTAGTGGTGTATGACTCACGTAAACA ACGCTTCAAATCTAACGATGAAGCTGACACTCCCCGCTCGTGTTCCAATA ATATTGTTCAGGGTTGTTTCCGTATTCCTTTGCCCTATATTATTTGACTA CACCTCTGACTAAAGTCCCCACAGCAGTGTACGTAGCCCAACGGAAATTA AGCCTCAGATTGACGGAAAGTCTATTTACTATTTTAGTTTATACAGCAGT ACCAAATACGTGCAGGAACTTTAACCCTATTATTTTCTTGTGAAAGAGGC CGGTGCTGTAGTACATACAGCAGTACCTGTGAACATGAAGTCACTTCGTG TCACTGATTTGCAACTGCTCCTTTACTTGTATCGATGCAGGGAGTTAGAT GTGTCATGCAACAAACTTGAGACCTTGCCTCTTGAGGTAGGGAAGTGTAT CCGGTTACGGAAGCTCAGAGCCAACGGCAACCACATGGAGGAGATCCCAA CAGAATTAGGGCATTGCTCCTTGCTTGAGGTATGTGTTACGGAGGCAAAC ATGATCTGCACAAATAATCAAGATGTTGCACTAACGGATCGGGACTCGCT ACCGCGTGTACCATCAACAAAGCAGGCAGCAAGGCTGTCCTAGATTATTT TTTACCAACGTACAATTGTCAAACCCACAATTCAATATCATAGTGCATCA TTTCTACGTCGTCTCTCTTCTTTCAATGCCAGAATATCAAAATATCCCTG ATCACCATTTACTTCTCTGGTGTAAAAATGCAGGTACATCAGCAAGACCT TAAAACTGTTCGAAAAACACCTCGAATGGATCCCCCACGCTCATGCTATG ATTCCTCCCGACTCATTCCTTCCTCCTTGTTGTTCATCCTCTTCCCGCTC GCAGGAGTTGGTACTGTCCGAGAACAAAATACAGGAAGTTCCCGAATCGC TGGCCCATCTGAAGGCGCTACGAATCCTCCGGCTGCAGAACAATCGGCTA AAGACTCTCCCGCACGAGCTCGGAGCCGTAATCACTCTGGAAGAACTCGA TTGCGCGGGCAATGCGGACTTGGATATTGTTCCGGAGTCTTTGCATAGTA ACACGGCCATGATCCTCTGGGTGTGTCGCCTACACAAAGGTATGGTACAC AACGGGAGGTCGGTGCAGCTCTGGAAGTGACAAAAAAGTGTCTCACATGA TTTTGGCCTATATACCTGCACCTTTTCTGGCGTTTTTACGTTCAGAAGAG CAAAGAATATCATGCGAAGGATAGAGGTTACAACTGCTGTGGAGATTGGT AGAAAACATAACACGGACAATCAATCTGCACACCATCGTGGCGCTGAGGC GTACCTTCGGGGAAAGCAATAGATCTCGGTGTCTAACGGTCATTTCCGGT AAGCCCACTCCTACCAAGCCCGGAAAGAACAGGTTAGATTTGGAAGGAAG ATTAAAGATGCTACTGCGCAAACCTTATTCGTCAATTTGACAGTCAAAGT CCTTCACGACTTAAACCTGTGGATTCGGAGCGAACTTCCTTGTGGCCGCC TGTTTGGACCTAACGGATCCGCCACGCGCCTCCACGTGCAAAACAGAGAA TATGTGGGTCTCTCTGTGACCTCGCCCATGCTCCAAACATGCGTCGTAAT GACCCAGACCACTCGGACGATGCGAAGCAACTCGAAAGCCTCAACGATGC CCTGGAAAAGAAGGCCCAGAAGATAGAAGAAACAAAGCTACGATTAAAGG TGCCGATGCAGAGAGAACGTCCCTAAGAATACACCTGGTGTGATGTGCGC ATGGTAGTTTTGATGGACATGGCCTCGTGTTCACAGGTTCGTGCCCTCTG CTCGCGGTAGGTGTTAGATTATGCTTTCTCTGCCGATTGGTGGTTGGTCC TCTCCTACGGCTCGATCGAGGTACGTGTAACCCACACCACCACTGCCAGC CACACATCGTTAGACTACTACCGCGTACATAACATTCGCTTCTCCGGAAT CAAGCATGCGATTAGCGTGCCCCCGCTTCAGCAAGCAGACTGCACACACG TTCGAAATATTCACTGAAGTCGTTGAAACCGTCGTGACACCTTCCAGGGG CTCTGTATTTTTATGTCCTGGGGCTGTTGCATCTTGCCTTTTTGTTGCTC GAAGAAGAAAGCATACCCACCTGCCGATTTCAATATTAGAGCAGCCCAGA CGTGCGTATGAAATGATGCACTCCGTCAAGCTCACCCCACTCGTCCATTT ATCTGACTTCTCCTTACCCGCCGGCAGGAAGAGATCCGCTTGCTGCAGGA GCAACGACGGGCGCTCCTGAAAGAACGACCAGGGGCGTATCTCGCAGCAA AACGCAAGGTGTGAGTGATCGATTCTTCTGTCACCCAGTTGCAAGTCGTC TACGCCACCATGACAAGAGAAAACCCAAAGCACGTTTTCTGCTCGCGGCG CCAAAACCACTCGACTAGGCTCTCCTTCAATTACGGCACTGCTCCTCTTG CCGAAATTTGTTGAGTAGCGCCTCCCCCCCCCCGGTTGCAATCGTAGTGC TTTTTGCCCTTTCACCATCTCATGTGTTGTCATCGCCCCTCCCTTTTCCA TATCGATGAACAGCGACTTTTACAGTCATATCCGTCACACCTGTACGGGT GGGTCGCATGAAAGCGTTCCTCTCCCCGGGGCGCCCCGACCGCCATTGCC TTTCACAAATGGATGCCAAACTTTAAAATTTACGTGCACCATCAGCGTGT ACAAACACCGCCACCAGCCTGGCTAACTACTACTTCAAATAACTGCCATC CACCCCCCCTCGTCCGTCCTCACAAGGTCGACGAGACCGTCTCCAAAGTT TGCAGCGTATCGTGAAATAAAAGGAGGAGAGCAAGGATGGCTGATGATGG AGCAAAGCGCGGCAGAAGTGGAATGTGGGATGAGCGGATCTTACAAATGC CTTTCTCTATGCGACCGGCGGACCTCTAAACGGTTAAGAGACACCGGCAA CGAGCAGTTCCGAGTGCAGCGTGCGTTGTCTGAATAGTCAGCCGCGTGCG ACTTGTTTTATTTTCGTGATAAAAGAGGCCTTGTAATAGCAAGGTTTCAA AATAACCACGCGTTTGATTTGTTTTTGTTAAGCTTTTCAATACAATCACA CGTTTGTGTGCGGATCAAGCAACTTGGTCTTGTCCTATATTCGGGTGTGT GAAAATGGACCAAGGCCCGCCTCCATGTCGCTGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig915:45910..49693-

>mRNA_P-littoralis_Contig915.18.2 ID=mRNA_P-littoralis_Contig915.18.2|Name=mRNA_P-littoralis_Contig915.18.2|organism=Pylaiella littoralis U1_48|type=CDS|length=771bp|location=Sequence derived from alignment at P-littoralis_Contig915:45910..49693- (Pylaiella littoralis U1_48)
ATGGAAGATGTCGAAGATCTTGTGCCACATCCAGACAAGAATGGCCTCTT
GAATCTCACGCACAGAGCTTGGGTGCTCCTGGATAGTGTTATATGGACCA
TGAAACGAGAGCTCGTCTCCCTCAATGTATCGTTCAACAACATTGAGTAC
CTTCCTCCTGAGCTTGGAGACCTCGTCCTTCTCAAGGAGTTAGATGTGTC
ATGCAACAAACTTGAGACCTTGCCTCTTGAGGTAGGGAAGTGTATCCGGT
TACGGAAGCTCAGAGCCAACGGCAACCACATGGAGGAGATCCCAACAGAA
TTAGGGCATTGCTCCTTGCTTGAGGAGTTGGTACTGTCCGAGAACAAAAT
ACAGGAAGTTCCCGAATCGCTGGCCCATCTGAAGGCGCTACGAATCCTCC
GGCTGCAGAACAATCGGCTAAAGACTCTCCCGCACGAGCTCGGAGCCGTA
ATCACTCTGGAAGAACTCGATTGCGCGGGCAATGCGGACTTGGATATTGT
TCCGGAGTCTTTGCATAGTAACACGGCCATGATCCTCTGGGTGTGTCGCC
TACACAAAGACCACTCGGACGATGCGAAGCAACTCGAAAGCCTCAACGAT
GCCCTGGAAAAGAAGGCCCAGAAGATAGAAGAAACAAAGCTACGATTAAA
GGAAGAGATCCGCTTGCTGCAGGAGCAACGACGGGCGCTCCTGAAAGAAC
GACCAGGGGCGTATCTCGCAGCAAAACGCAAGGTCGACGAGACCGTCTCC
AAAGTTTGCAGCGTATCGTGA
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