mRNA_P-littoralis_Contig915.18.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: D7FT92_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT92_ECTSI) HSP 1 Score: 236 bits (602), Expect = 6.520e-73 Identity = 223/256 (87.11%), Postives = 235/256 (91.80%), Query Frame = 1
Query: 1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSVS 768
ME+V++LVPHPD NGLLNLT KREL+ LNVSFNNIEYLPPELGDLVLLKEL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLD+VP +LHS+TAMILWVCRLHKDH++DA+QL+ LNDALE KAQKIEETKLRLKEEIR+LQEQRRALLKERPGAYLAAKRKVD TVSKVCSVS
Sbjct: 1 MEEVDELVPHPDSNGLLNLT--------------KRELIVLNVSFNNIEYLPPELGDLVLLKELDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDVVPAALHSDTAMILWVCRLHKDHAEDAEQLQRLNDALENKAQKIEETKLRLKEEIRILQEQRRALLKERPGAYLAAKRKVDATVSKVCSVS 242
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A2P4YKA4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YKA4_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.530e-22 Identity = 133/255 (52.16%), Postives = 169/255 (66.27%), Query Frame = 1
Query: 1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
MED+ D PD+NG+L+L + WV LD V+W+ L+ LNVS N + ++ +G+L LL+EL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LEE+ C GN L +PESL SNT ++LW+C K H + +L +N LE+ A+ +E +L+L+EEI LQ ++++L ERP YL K++V+ S+VCSV
Sbjct: 1 MEDLADASLTPDENGILDLQDKHWVTLDEVVWSYAHSLLVLNVSRNQLVHISEAVGNLNLLRELLLANNRISSIPVQIARCVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPVLEEVGCEGNEGLTDIPESLRSNTKLVLWICSTVKRHRTEVAELVEINSELERMARLGDEERLKLREEIADLQRKKKSLEDERPHNYLFMKKQVERITSEVCSV 255
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: H3H307_PHYRM (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3H307_PHYRM) HSP 1 Score: 100 bits (249), Expect = 8.870e-21 Identity = 147/255 (57.65%), Postives = 179/255 (70.20%), Query Frame = 1
Query: 1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
MED+ D PD+NG+L+L + WV LD V+W L+ LNVS N + ++ +G+L LL+EL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LEE+ C GN L +PESL SNT ++LW+C K H + +L +N LE+ A+ +E +L+L+EEI LQ ++R L ERP YL K+ V S+VC+V
Sbjct: 1 MEDLVDASLIPDENGILDLQDKHWVTLDEVVWAYAHSLLVLNVSRNQLVHISEAIGNLDLLRELLLANNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPLLEEVGCEGNDGLTDIPESLRSNTKLVLWICSTVKRHRGEVAELVEINSELERMARLGDEERLKLREEIADLQRKKRILEDERPHNYLFVKKHVARITSEVCNV 255
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A6A3JPH2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3JPH2_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 3.210e-20 Identity = 148/255 (58.04%), Postives = 182/255 (71.37%), Query Frame = 1
Query: 1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
ME++ D PD+NG+L+L + WV LD V+WT L+ LNVS N + ++ +G+LVLL+EL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LEE+ C GN L +PESL SNT ++LW+C K H +L +N LE+ A+ +E +L+L+EEI Q +++AL ERP YL K+ V S+VC++
Sbjct: 1 MEELVDASLTPDENGILDLQDKHWVTLDEVVWTYAHSLLVLNVSRNQLVHISEAVGNLVLLRELILANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPLLEEVCCEGNDGLTDIPESLRSNTKLVLWICSTVKRHRGQVAELVEINSELERMARLGDEERLKLREEIADQQRKKKALEDERPHNYLFVKKHVVRITSEVCNL 255
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A225UQY5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UQY5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 8.420e-20 Identity = 142/255 (55.69%), Postives = 176/255 (69.02%), Query Frame = 1
Query: 1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
MED+ D PD+NG+L+L WV LD ++WT L+ LNVS N + + +G+L L+EL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX LEE+ C GN L +PESL SNT ++LW+C K H + +L +N LE+ A+ +E +L+L+EE+ LQ +R+ L ERP YL K++V S+VC++
Sbjct: 1 MEDLVDASLTPDENGILDLQDNHWVTLDEIVWTYSHSLLVLNVSRNQLVQISEAIGNLTHLRELLMANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSYNDLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDCPLLEEVGCEGNEGLTDIPESLRSNTKLVLWICSTVKRHRTEVAELIEINTELERMARLGDEERLKLREELADLQRKRKKLEDERPHNYLFMKKQVVRLTSEVCAI 255
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A836CI12_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI12_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.830e-19 Identity = 41/64 (64.06%), Postives = 54/64 (84.38%), Query Frame = 1
Query: 1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKEL 192
ME+ ++L+PHPDK G L+LTHR+WV LDSV+WT +EL+ LN++FNNIE LPPELG L LL++L
Sbjct: 1 MEEYDELIPHPDKAGCLDLTHRSWVELDSVLWTFSKELLVLNIAFNNIERLPPELGHLTLLRDL 64
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A8J5JBD1_9STRA (AAA domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JBD1_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 7.470e-19 Identity = 149/255 (58.43%), Postives = 184/255 (72.16%), Query Frame = 1
Query: 1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
MED+ D PD+NG+L+L + WV LD V+WT L+ LNV+ N + ++ +G+L LL+EL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LEE+ C GN L +PESL SNT ++LW+C K H + +L +N LE+ A+ +E +L+L+EEI LQ +++ L ERP YL K+ V S+VC++
Sbjct: 1 MEDLVDASLIPDENGILDLQDKHWVTLDEVVWTYAHALLVLNVARNQLVHISESVGNLELLRELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPLLEEVGCEGNEGLIDIPESLRSNTKLVLWICSTVKRHRAEVSELVEINSELERMARLGDEERLKLREEITNLQRKKKVLEDERPHNYLFVKKHVVRVTSEVCNL 255
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A8K1C3I3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3I3_PYTOL) HSP 1 Score: 94.4 bits (233), Expect = 1.500e-18 Identity = 137/255 (53.73%), Postives = 175/255 (68.63%), Query Frame = 1
Query: 1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
ME+ D PD NG+L+L + WV LD ++W+ + L+ L VS N + ++PP++ +LVLL+ELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX X XXXXXXXXXXXXXXXXXXXXXXXXXXXX LEE+ C N L +PESL NT ++LW+C K H + +L ++N LE+ A+ +E +L+L+++I LQ ++ AL ERP YL K V S+VC++
Sbjct: 1 MEEFFDDSLVPDANGILDLQEKHWVTLDEIVWSFGQSLLVLIVSRNQLVHIPPDVANLVLLRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEIIDASYNEXATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAKLEEVVCDENPQLQDIPESLRDNTKLVLWICGTMKQHRAEVDELVAINTELERMARLSDEERLQLRQQIATLQREKAALEAERPHHYLFVKHHVLRVSSQVCTL 255
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A3R7J8U7_9STRA (DNA helicase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J8U7_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 4.340e-18 Identity = 145/255 (56.86%), Postives = 182/255 (71.37%), Query Frame = 1
Query: 1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKVDETVSKVCSV 765
ME++ D PD+NG L+L + WV LD V+WT L++LNVS N + ++P +G+L LL+EL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+E+ C GN L +PESL SNT ++LW+C K H + +L +N LE+ A+ +E +L+L+ EI LQ +++ L ERP YL K+ + S+VC++
Sbjct: 1 MEELVDASLIPDENGTLDLQDKHWVTLDEVVWTYAHSLLTLNVSRNQLVHIPEAVGNLDLLRELILANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPALQEVGCEGNDGLTDIPESLRSNTKLVLWICGTVKRHRAEVTELVDINSELERMARLGDEERLKLRGEITDLQRRKKTLEDERPHNYLLVKKHILHVTSEVCAL 255
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Match: A0A2D4C0D4_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0D4_PYTIN) HSP 1 Score: 92.4 bits (228), Expect = 1.660e-16 Identity = 143/260 (55.00%), Postives = 183/260 (70.38%), Query Frame = 1
Query: 1 MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYLPPELGDLVLLKELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVITLEELDCAGNADLDIVPESLHSNTAMILWVCRLHKDHSDDAKQLESLNDALEKKAQKIEETKLRLKEEIRLLQEQRRALLKERPGAYLAAKRKV----DETVSKVCSVS 768
ME++ D PD NG+L+L + WV LD V+W+ + L+ LNV+ N + ++PP++G+L LL+EL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LE + C N DL +PESL NT ++LW+C K H ++L +N LE+ A+ +E +L+L++EI L ++ AL ERP YL KR++ + + + CS +
Sbjct: 684 MEELLDDSLQPDANGVLDLQDKHWVTLDEVVWSFSQSLLVLNVARNQLVHVPPDVGNLHLLRELLLSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTLCDCPQLERVSCQENPDLADIPESLRENTKLVLWICGTMKQHRAQVQELVGINAELERLARLSDEERLQLRQEIARLSREKAALEAERPHHYLFVKRQLHRVSSQELKRACSTA 943 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig915.18.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig915.18.2 >prot_P-littoralis_Contig915.18.2 ID=prot_P-littoralis_Contig915.18.2|Name=mRNA_P-littoralis_Contig915.18.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=257bp MEDVEDLVPHPDKNGLLNLTHRAWVLLDSVIWTMKRELVSLNVSFNNIEYback to top mRNA from alignment at P-littoralis_Contig915:45910..49693- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig915.18.2 ID=mRNA_P-littoralis_Contig915.18.2|Name=mRNA_P-littoralis_Contig915.18.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3784bp|location=Sequence derived from alignment at P-littoralis_Contig915:45910..49693- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig915:45910..49693- >mRNA_P-littoralis_Contig915.18.2 ID=mRNA_P-littoralis_Contig915.18.2|Name=mRNA_P-littoralis_Contig915.18.2|organism=Pylaiella littoralis U1_48|type=CDS|length=771bp|location=Sequence derived from alignment at P-littoralis_Contig915:45910..49693- (Pylaiella littoralis U1_48)back to top |