mRNA_P-littoralis_Contig91.170.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Match: A0A6H5K0P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P6_9PHAE) HSP 1 Score: 123 bits (308), Expect = 9.600e-29 Identity = 71/151 (47.02%), Postives = 82/151 (54.30%), Query Frame = 2
Query: 1319 VTDATADGRVCNVEMDGHSRLMHIWWRPREQVALWNRYGHVTLYDDTAVKKRFHMPIGVLAVIDSEKSDANRGPRHNGGHHDGHGRVDVEECTQV-AW---------G*AARHLHPGR*FGHGRGSGSGVP*CAAKALSVAPEPKHPQGLR 1741
V A ADG VC ++MD RL H WW+ REQVALWNRYGHV LYDDTAVK R+ MP+GVLAVIDSE G + + T W G LHPGR G G GVP A +AL +AP+P+H QG R
Sbjct: 10 VMAARADGGVCEIKMDDSGRLTHSWWQTREQVALWNRYGHVALYDDTAVKNRYRMPLGVLAVIDSEYRTRIVGQS-----------ITADTTTDTFLWMLKSALESRGGKQPDLHPGRGCGDDGGGARGVPGRADEALIMAPQPEHHQGPR 149
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Match: A0A6H5JZ86_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ86_9PHAE) HSP 1 Score: 128 bits (321), Expect = 5.760e-28 Identity = 62/80 (77.50%), Postives = 68/80 (85.00%), Query Frame = 3
Query: 1521 RTRIVGQGITEDTTTDTVVWMLKNALRSRGGKQPDISIQDADSAMAGAVGRVFPDALPRRCLWHLNRSILKAFAKVLGRE 1760
RTRIVGQ IT DTTTDT WMLK+AL SRGGKQPDISIQDAD+AM AV VFPDAL RRCLWHLN++I+KA AKVLG +
Sbjct: 54 RTRIVGQSITADTTTDTFQWMLKSALESRGGKQPDISIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGD 133
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Match: A0A6H5K3E8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E8_9PHAE) HSP 1 Score: 128 bits (321), Expect = 3.810e-27 Identity = 62/80 (77.50%), Postives = 68/80 (85.00%), Query Frame = 3
Query: 1521 RTRIVGQGITEDTTTDTVVWMLKNALRSRGGKQPDISIQDADSAMAGAVGRVFPDALPRRCLWHLNRSILKAFAKVLGRE 1760
RTRIVGQ IT DTTTDT +WMLK+AL SRGGKQPDI IQDAD+AM AV VFPDAL RRCLWHLN++I+KA AKVLG E
Sbjct: 107 RTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGE 186
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Match: A0A6H5K5C5_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5C5_9PHAE) HSP 1 Score: 128 bits (321), Expect = 6.200e-27 Identity = 62/80 (77.50%), Postives = 68/80 (85.00%), Query Frame = 3
Query: 1521 RTRIVGQGITEDTTTDTVVWMLKNALRSRGGKQPDISIQDADSAMAGAVGRVFPDALPRRCLWHLNRSILKAFAKVLGRE 1760
RTRIVGQ IT DTTTDT +WMLK+AL SRGGKQPDI IQDAD+AM AV VFPDAL RRCLWHLN++I+KA AKVLG E
Sbjct: 107 RTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGE 186
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Match: A0A6H5KUA5_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA5_9PHAE) HSP 1 Score: 124 bits (311), Expect = 1.070e-25 Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 3
Query: 1521 RTRIVGQGITEDTTTDTVVWMLKNALRSRGGKQPDISIQDADSAMAGAVGRVFPDALPRRCLWHLNRSILKAFAKVLGRE 1760
RTRIVGQ IT DTTTD ++WMLK+AL SRGGKQPDI IQDAD+AM AV VFPDAL RRCLWHLN++I+KA AKVLG +
Sbjct: 276 RTRIVGQIITADTTTDALLWMLKSALESRGGKQPDIFIQDADAAMTAAVREVFPDALARRCLWHLNQNIIKALAKVLGGD 355
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Match: A0A6H5JAS6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAS6_9PHAE) HSP 1 Score: 120 bits (301), Expect = 1.500e-24 Identity = 60/80 (75.00%), Postives = 65/80 (81.25%), Query Frame = 3
Query: 1521 RTRIVGQGITEDTTTDTVVWMLKNALRSRGGKQPDISIQDADSAMAGAVGRVFPDALPRRCLWHLNRSILKAFAKVLGRE 1760
RTRIVGQ IT DTTT+T VWMLK+ALRSRGGKQPDI IQDAD AM AV VFPDAL RRCLWHL + I+KA AK LG +
Sbjct: 266 RTRIVGQSITADTTTNTFVWMLKSALRSRGGKQPDIFIQDADVAMTAAVREVFPDALARRCLWHLYQHIMKALAKDLGGQ 345
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Match: A0A6H5LMZ3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LMZ3_9PHAE) HSP 1 Score: 121 bits (303), Expect = 5.710e-24 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 3
Query: 1521 RTRIVGQGITEDTTTDTVVWMLKNALRSRGGKQPDISIQDADSAMAGAVGRVFPDALPRRCLWHLNRSILKAFAKVLGRE 1760
RTRIVGQ IT DTTTDT +WMLK+AL SRGGKQPDI IQDA +AM AV VFPDAL RRCLWHL ++I+KA AKVLG +
Sbjct: 604 RTRIVGQSITADTTTDTFLWMLKSALESRGGKQPDIFIQDAVAAMTAAVREVFPDALARRCLWHLKQNIIKALAKVLGGD 683
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Match: A0A6H5JNB0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB0_9PHAE) HSP 1 Score: 120 bits (301), Expect = 5.880e-24 Identity = 60/80 (75.00%), Postives = 65/80 (81.25%), Query Frame = 3
Query: 1521 RTRIVGQGITEDTTTDTVVWMLKNALRSRGGKQPDISIQDADSAMAGAVGRVFPDALPRRCLWHLNRSILKAFAKVLGRE 1760
RTRIVGQ IT DTTT+T VWMLK+ALRSRGGKQPDI IQDAD AM AV VFPDAL RRCLWHL + I+KA AK LG +
Sbjct: 270 RTRIVGQSITADTTTNTFVWMLKSALRSRGGKQPDIFIQDADVAMTAAVREVFPDALARRCLWHLYQHIMKALAKDLGGQ 349
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Match: A0A6H5JK57_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK57_9PHAE) HSP 1 Score: 115 bits (289), Expect = 6.410e-24 Identity = 58/80 (72.50%), Postives = 64/80 (80.00%), Query Frame = 3
Query: 1521 RTRIVGQGITEDTTTDTVVWMLKNALRSRGGKQPDISIQDADSAMAGAVGRVFPDALPRRCLWHLNRSILKAFAKVLGRE 1760
RTRIVGQ IT DTTT+T VWMLK+ALRSRGGKQPDI IQDA+ AM AV VFPDAL RRCLW L + I+KA AK LG +
Sbjct: 266 RTRIVGQSITADTTTNTFVWMLKSALRSRGGKQPDIFIQDAEVAMTAAVREVFPDALARRCLWRLYQHIMKALAKDLGGQ 345
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Match: A0A6H5KZF1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF1_9PHAE) HSP 1 Score: 117 bits (293), Expect = 2.850e-23 Identity = 59/101 (58.42%), Postives = 70/101 (69.31%), Query Frame = 3
Query: 1521 RTRIVGQGITEDTTTDTVVWMLKNALRSRGGKQPDISIQDADSAMAGAVGRVFPDALPRRCLWHLNRSILKAFAKVLGREGFCK*GVLNLCMLVSYDCPQL 1823
RTR +GQ T D TTDT +WMLK ALRSRGGK+PDI IQDAD+AM AV VFP+AL RRCLWHLN++I+KA AK LG G L +C V ++
Sbjct: 312 RTRTIGQSTTADITTDTFLWMLKGALRSRGGKRPDIFIQDADAAMTAAVREVFPEALARRCLWHLNQNIMKALAKDLG-------GKLKVCSTVCLPLNRI 405 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig91.170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig91.170.1 >prot_P-littoralis_Contig91.170.1 ID=prot_P-littoralis_Contig91.170.1|Name=mRNA_P-littoralis_Contig91.170.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=134bp MHQALLAMPWVSVPCFALRRKGRYIVTSIVEHTFFSLMFPLLGPPHNRAKback to top mRNA from alignment at P-littoralis_Contig91:563273..568237- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig91.170.1 ID=mRNA_P-littoralis_Contig91.170.1|Name=mRNA_P-littoralis_Contig91.170.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4965bp|location=Sequence derived from alignment at P-littoralis_Contig91:563273..568237- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig91:563273..568237- >mRNA_P-littoralis_Contig91.170.1 ID=mRNA_P-littoralis_Contig91.170.1|Name=mRNA_P-littoralis_Contig91.170.1|organism=Pylaiella littoralis U1_48|type=CDS|length=402bp|location=Sequence derived from alignment at P-littoralis_Contig91:563273..568237- (Pylaiella littoralis U1_48)back to top |