mRNA_P-littoralis_Contig908.26.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE) HSP 1 Score: 324 bits (830), Expect = 2.310e-94 Identity = 183/394 (46.45%), Postives = 250/394 (63.45%), Query Frame = 1
Query: 736 LLLKKRPAAAVSLAVDEIVTNFAAALTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAV--EQVEFLSTDETGDALFHMLPSPGTSYKCFDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATLTRSVRLEKPTTFSMTILS---NSGKDVLGGGELSLNFTRIKEFGGEAFP 1902
+LL+ + +AV + + +F A LT+AVV +NTLELA+GT F+G ++ SKL IR CYKDLS++I++G +G+MD IVVTGTPGIGKS FG+YL+YLLR +G TVVLE+K+ W+RFSDEGV G F +F AG+L + WYLSDPE +P+E TVVL+SPRK + NEF+KQ + MP W DEL CR+ +FPH D VR F KVGGVARAVF + + KM+ A S ++L LL+Q+ + + V+ +STD +GDAL H+LP P T ++ F V FASE+A + + ++E+ V A H +L KV R FE +AH T+ + + F M ILS +S K VL G L L+F + + F G +FP
Sbjct: 22 ILLRPPKHGCLLVAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNSTWYLSDPEDRPKELLGLPTVVLLSPRKSRVNEFMKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETD-VRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAE-RAAGFETIAHKTIGGA---SEQQWFDMRILSRASSSTKSVLEGNRLRLSFVKEQSFEGNSFP 410
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A6H5KCR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE) HSP 1 Score: 145 bits (366), Expect = 8.950e-37 Identity = 73/128 (57.03%), Postives = 97/128 (75.78%), Query Frame = 1
Query: 736 LLLKKRPAAAVSLAVDEIVTNFAAALTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRF 1119
+LL+ + +AV + + +F A LT+AVV +NTLELA+GT F+G ++ SKL IR CYKDLS++I++G +G+MD IVVTGTPGIGKS FG+YL+YLLR +G TVVLE+K W+RFSD GV G F
Sbjct: 3 ILLRPPKHGCLPVAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGVTVGDF 130
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A835Z6Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q5_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.940e-33 Identity = 106/328 (32.32%), Postives = 163/328 (49.70%), Query Frame = 1
Query: 790 VTNFAAALTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQG-RFETFSDAGFLNDPAGWYLSDP--EGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPSPGTSYKCFDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATL 1764
V F AL+RA ++ L L +GT F+G G+++ IRSCY++L I +G+ +V+TGTPGIGKS + Y L+ LR G TVV + +YRFS E V F +AG L P W+L DP + +P G G+T+V VSP ++ FLK+ A MPVWS++E+ CR+++F H V+ E+ GGV R V Q K+++A + LR + ST D + HM + + +++AS+YA + + +A E + + + ++ L + RG +FE H L
Sbjct: 83 VVTFWRALSRASDDDDCLALKDGTWFMGDYVRGNRIYIRSCYRELMDTIKAMVTSGTR-RVVITGTPGIGKSCYALYWLWHLRRAGNTVVYQIGADFYRFSGELVQHADTIGAFKNAGGLWHPDVWFLCDPARDHEPYGGCLGVTLVFVSPSTERYKAFLKEPRATTRYMPVWSQEEVQRCRQLLFDHVPQ-SRVQDLLEQWGGVPRFVLQFADDDTQQAKLQQAIRKCATAGLRATILNAGEDAGSTAALSDKVLHMCTADFVHVR---LMWASQYAFDALCEAQGEASKGELRAFIASSARLPSL-----ATLRGLVFEPYVHRLL 400
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A836CEN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN6_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.600e-30 Identity = 93/269 (34.57%), Postives = 133/269 (49.44%), Query Frame = 1
Query: 841 LELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIF---------PHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPSPGTSYKCFDVVFASEYALE 1620
L+L GT F+G+R GS + IR CY +L + I + +V+TGTPGIGK+ + +Y L+ LR G+TVV + WYRF VQG + F AG+L+DPA + F GIT+V V+PR + +EFLK +A MPVWSE+ELL C ++F P AR VR F + GGV R V + G + A ++G L +T D L H+ + K +++AS+Y +
Sbjct: 16 LKLPAGTWFMGNRDFGSAIYIRDCYCNLMEQINKLVAARRVQRVVITGTPGIGKTCYAFYWLWHLRQTGRTVVYQLGPGWYRFCGATAVQGSRKAFLAAGYLDDPA----AXXXXXXXXXFGGITLVFVTPRWVRYHEFLKAPAATKRFMPVWSEEELLRCAELLFSGQDLERDVPQAR----VRELFRRWGGVPRYVLQYAHDDERQGTLTAAIHHCSVGDLHAAIRSTGEGTGTTVVLSDKLVHIHTCGAFTSK--RLMWASDYVFD 274
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A397UD55_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UD55_9GLOM) HSP 1 Score: 137 bits (346), Expect = 2.260e-30 Identity = 101/330 (30.61%), Postives = 157/330 (47.58%), Query Frame = 1
Query: 811 LTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPS-PG---------TSYKCFDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATLTR 1770
L A + NN L+L +GT F+G +K G+ L IR CY L+ II + IN +TG PGIGK+ FGYYLLYLL+ + KT+V + ++ ++ F +L++ WY+ D G+P T++ SP+K EF K + MP WS +E+ ECR IF H + V + + GG+ R VF + Q +E A ++ N LL V ++ D+ + H+ + PG T Y ++FASE+ E V + Q + V A+ + ++ RG +FE++AH L +
Sbjct: 43 LENAKIDNNFLQLPDGTYFLGDKKQGTILYIRKCYLHLADIIFNEKINRCR----ITGNPGIGKTFFGYYLLYLLQKQNKTIVYHKARQYPILFNKQYTFRSDNIFDFNEYLDNTDVWYIVD--GQPPLEVHAKTILFCSPQKQHYKEFDKMIGTSIRFMPAWSWNEINECRIGIFNHLE-IAKVEDLYSRWGGIPRFVFEKALDSSQQNHLEEAINKCNTRLLDFVGEIDHA-----DDISHRIVHIHTNLPGEEEEKEDEETHYVNKFILFASEWVAEKVIDKFEKSYNQQLKNFVTASSSDNEYST-----LRGVIFEQIAHRILQK 355
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A397UC44_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UC44_9GLOM) HSP 1 Score: 132 bits (331), Expect = 2.710e-28 Identity = 102/328 (31.10%), Postives = 153/328 (46.65%), Query Frame = 1
Query: 811 LTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPS-PG---------TSYKCFDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATL 1764
L A + NN L+L +GT F+G +K GS L IR CY L+ II M +TG PGIGK+ FGYYLLY L + KT+V + ++ ++ + F +LN+ WY+ D G+P T++ SP+K EF K + MP+WS +E+ ECR +F H + V + GG+ R V ++ Q ++E A S+ N LL V + D+ + H+ + PG T Y ++FASE+ E V Q + V A+L + N+ +G +FER+AH L
Sbjct: 85 LKNAKIDNNFLQLPDGTYFLGDKKQGSILYIRKCYLHLADIIF----KEKMRRCRITGNPGIGKTFFGYYLLYFLSKQNKTIVYHKACQFPILFNKQNTFSSDKIFDFYEYLNNRDVWYIVD--GQPPLEVRAKTILFCSPQKQHYKEFDKMVGTEIRFMPIWSWNEINECRIGMFNHLE-IAKVEDLYSCWGGIPRFVLENALYSSQQNQLEEAISKCNNRLLDFVGEINHA-----DDISHRIVHIHTNLPGEEEENEDEETHYIKKFLLFASEWVAEKVMDKFERNYNQLLRNFVTASLFENEYNT-----LQGVIFERIAHRIL 395
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A8H3WYS8_GIGMA (Putative crinkler family protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H3WYS8_GIGMA) HSP 1 Score: 127 bits (319), Expect = 1.430e-26 Identity = 106/359 (29.53%), Postives = 167/359 (46.52%), Query Frame = 1
Query: 781 DEIVTNFAAALTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQ-KEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHM---LPSPGTS-------YKCFDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATL----TRSVRLEKPTTFSMTI 1812
DE ++ F L ++ L L++ F G + S + IR CY DL I+ D I + +TG PGIGK+ FGYY+LY L + KTV+ + FS+EG + + FS +LN+P WY+ D G + T+++ SP+K EF K + + MPVW+ +E+ ECR IF H +D ++ + + GG+ R V Q ++ A V+ +L V E D+ L H+ LP + Y + FASEY V + + + +MA+ + +N GS RG +FER+AH L T ++R+ +P + + I
Sbjct: 116 DEKLSKFWKVLKNVKISGKFLRLSDNNHFFGKQSQPSVVFIRDCYIDLEGIVFDKKIR----RLRITGNPGIGKTFFGYYILYKLASKCKTVIYHKVNNDPIIFSNEGSIS-KENLFSFNQYLNEPETWYIVD--GHVPKECEAKTILVCSPKKGNYREFDKYIGSTIRYMPVWTFNEIEECRSNIFNHL-GIDKIKNLYMRWGGIPRFVLENAHDKAQQNLLQHAIDTVDETILNYVG-----ETNCPDDVSHKLVHIRTNLPVDEETDVEKVLPYTETYIYFASEYVANEVVVKLKINYKEKLKNFIMAS---SSINEY--GSLRGNIFERVAHQILQGGGTFNIRILEPHSITCKI 456
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A372Q6T8_9GLOM (Crinkler domain-containing protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372Q6T8_9GLOM) HSP 1 Score: 124 bits (312), Expect = 2.290e-25 Identity = 100/345 (28.99%), Postives = 154/345 (44.64%), Query Frame = 1
Query: 841 LELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQ----------KEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPSP------------------GTSYKCFD---------VVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATL 1764
LEL G F+G S L IRSCY+ L I++D N S+ N+++TG PGIGK+ FGYYLLY L +TV+ + +E +Y + Q R FL++ WY+ D GK + T T+++ SP+K EF K + MPVWS E+ +C+ ++ H ++ + V+T F+K GG+ R V T K++ A + +L V A E +T L H++ +P G + + + FASEY E V + R + + ++L NS +G + FE +AH L
Sbjct: 169 LELPKGVHFLGEINEPSTLFIRSCYRHLLDIVLDN--NSSVRNLIITGNPGIGKTYFGYYLLYNLIQRNQTVMYDSHSTGHVIVFDQEAFYLYEVLNADQIR-------AFLSNANNWYIVD--GKEPQKATAKTILVCSPKKAIFKEFEKFQLSSTRYMPVWSYAEISKCKDKLYNHLQN-NLVKTLFDKWGGIPRFVLEKATDYSHQCKLQEAIDACDFDILDYVGATE------AKDTSHKLIHIVTNPLVVDVNIVNEQEQTDVDGGNDVEYIEEDPPYSQKIIKFASEYVAERVIMRLELRNRGKLRRDLFSSLSEGTSNSVLG-----RYFEEIAHQLL 490
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: W4FCC5_9STRA (Crinkler domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCC5_9STRA) HSP 1 Score: 123 bits (308), Expect = 6.350e-25 Identity = 105/327 (32.11%), Postives = 154/327 (47.09%), Query Frame = 1
Query: 823 VVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKW--YRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALF---HMLPSPGTSYKCF---DVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATLTRSVR 1779
VV + LEL G +G+ +G K+ IR CY L K+ + ++V+ G PGIGK+ FG ++L L E KTVV E Y FS + VV+G F FL P +Y+ D KP++ +T++L SPR + F D+ MPVW+ DE+L CR++++P V+ V F + GGV R V +ERA VN + V A+ ++ DA+F H L + K F VVFAS Y ++V + + + ++ + A+ L G RG +FER HA L R R
Sbjct: 157 VVADAILELPVGAFLLGYPALGLKVYIRPCYPPLWKVCWKLIQDPKSPHLVILGNPGIGKTFFGIFILLQLARENKTVVYESGASMCRYLFSGDTVVEGTQNDF--VAFLRLPTTYYIVDAV-KPQK-CQAMTILLTSPRHEVWFSF-NNDNCDFRYMPVWTLDEILSCRKLLYPDL-DVNMVTDCFHRWGGVPRYVLENMLRDTHQSLLERALGMVNCDWV--VNAIGEL---------DAMFEASHRLLHYDVNEKTFINKHVVFASPYVQDVVYRRLCKDDHDKLVKFLAASEGIDQL-----GVVRGIVFERYVHAVLPRGGR 461
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: M4C1F8_HYAAE (RxLR effector candidate protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1F8_HYAAE) HSP 1 Score: 119 bits (298), Expect = 1.240e-24 Identity = 92/277 (33.21%), Postives = 142/277 (51.26%), Query Frame = 1
Query: 823 VVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDN--IVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKE-KWYR--FSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGK---MERATSQVNLGLLRQVCAVEQVEFLSTD-ETGDALFHMLPSPGTSYKCFDVVFASEYALELV 1626
VV + + L GT +G +K+GS + IR CY L K+ +D + ++ N +V+ GTPGIGK+ FGY +L+ L G TVV E +E KW R FS + VVQG + F+ P +Y+ D G T+++ SPRK +++ +++ A +L MPVW+E+E+ CR +++ V+ V F K G VAR V +A+ K ++ A Q +L +V VE + + L H + Y+ FD FA+ Y E V
Sbjct: 158 VVADAVIALPEGTFILGVQKLGSVIYIRHCYSQLWKLCLDTLNHAAIANHCVVILGTPGIGKTHFGYLVLFHLAHTGATVVYETREDKWTRTLFSGDKVVQGLWTDFNQV--HAQPETFYVVD--GVEPSRCDAKTILVTSPRKRIWHKYSQRNGAKVLFMPVWTEEEIYRCRDLLYSDT-PVETVEKRFCKWGDVARYVL---RYAKDKAKQKVLKEAIGQADL----KVIVSASVESSGVECDVSHRLLHFRVTRDFGYEGFD--FATNYIAEKV 420 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig908.26.1 >prot_P-littoralis_Contig908.26.1 ID=prot_P-littoralis_Contig908.26.1|Name=mRNA_P-littoralis_Contig908.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=593bp MRLILLLLLCCVAPGATFVANVAPSAPSKSRLGRHDDGTRSSSSAFPGRHback to top mRNA from alignment at P-littoralis_Contig908:60212..70395+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig908.26.1 ID=mRNA_P-littoralis_Contig908.26.1|Name=mRNA_P-littoralis_Contig908.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10184bp|location=Sequence derived from alignment at P-littoralis_Contig908:60212..70395+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig908:60212..70395+ >mRNA_P-littoralis_Contig908.26.1 ID=mRNA_P-littoralis_Contig908.26.1|Name=mRNA_P-littoralis_Contig908.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1779bp|location=Sequence derived from alignment at P-littoralis_Contig908:60212..70395+ (Pylaiella littoralis U1_48)back to top |