mRNA_P-littoralis_Contig908.26.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig908.26.1
Unique NamemRNA_P-littoralis_Contig908.26.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A6H5KFB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB9_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 2.310e-94
Identity = 183/394 (46.45%), Postives = 250/394 (63.45%), Query Frame = 1
Query:  736 LLLKKRPAAAVSLAVDEIVTNFAAALTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAV--EQVEFLSTDETGDALFHMLPSPGTSYKCFDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATLTRSVRLEKPTTFSMTILS---NSGKDVLGGGELSLNFTRIKEFGGEAFP 1902
            +LL+      + +AV + + +F A LT+AVV +NTLELA+GT F+G  ++ SKL IR CYKDLS++I++G  +G+MD IVVTGTPGIGKS FG+YL+YLLR +G TVVLE+K+ W+RFSDEGV  G F +F  AG+L   + WYLSDPE +P+E     TVVL+SPRK + NEF+KQ  +    MP W  DEL  CR+ +FPH    D VR  F KVGGVARAVF  +   +   KM+ A S ++L LL+Q+ +   + V+ +STD +GDAL H+LP P T ++ F V FASE+A  +    + ++E+      V A   H +L  KV    R   FE +AH T+  +    +   F M ILS   +S K VL G  L L+F + + F G +FP
Sbjct:   22 ILLRPPKHGCLLVAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKDSWFRFSDEGVTVGYFYSFRRAGYLYGNSTWYLSDPEDRPKELLGLPTVVLLSPRKSRVNEFMKQPGSRRFYMPPWCLDELFRCRQAVFPHVPETD-VRERFSKVGGVARAVFDAEKLKQVCLKMQAAASNMDLNLLQQILSRSRDDVDQVSTDRSGDALLHLLPIPETGFEEFSVDFASEFAHIVTLGELPKKEFAPLASFVGAAFAHDELGDKVTAE-RAAGFETIAHKTIGGA---SEQQWFDMRILSRASSSTKSVLEGNRLRLSFVKEQSFEGNSFP 410          
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A6H5KCR9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR9_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 8.950e-37
Identity = 73/128 (57.03%), Postives = 97/128 (75.78%), Query Frame = 1
Query:  736 LLLKKRPAAAVSLAVDEIVTNFAAALTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRF 1119
            +LL+      + +AV + + +F A LT+AVV +NTLELA+GT F+G  ++ SKL IR CYKDLS++I++G  +G+MD IVVTGTPGIGKS FG+YL+YLLR +G TVVLE+K  W+RFSD GV  G F
Sbjct:    3 ILLRPPKHGCLPVAVPKALADFGAVLTKAVVADNTLELADGTFFLGEPRLRSKLFIRPCYKDLSELILEGVTDGTMDKIVVTGTPGIGKSEFGFYLMYLLRGQGNTVVLERKGCWFRFSDGGVTVGDF 130          
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A835Z6Q5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q5_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.940e-33
Identity = 106/328 (32.32%), Postives = 163/328 (49.70%), Query Frame = 1
Query:  790 VTNFAAALTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQG-RFETFSDAGFLNDPAGWYLSDP--EGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPSPGTSYKCFDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATL 1764
            V  F  AL+RA   ++ L L +GT F+G    G+++ IRSCY++L   I     +G+   +V+TGTPGIGKS +  Y L+ LR  G TVV +    +YRFS E V        F +AG L  P  W+L DP  + +P  G  G+T+V VSP  ++   FLK+  A    MPVWS++E+  CR+++F H      V+   E+ GGV R V        Q  K+++A  +     LR        +  ST    D + HM  +     +   +++AS+YA + + +A  E    + +  + ++     L      + RG +FE   H  L
Sbjct:   83 VVTFWRALSRASDDDDCLALKDGTWFMGDYVRGNRIYIRSCYRELMDTIKAMVTSGTR-RVVITGTPGIGKSCYALYWLWHLRRAGNTVVYQIGADFYRFSGELVQHADTIGAFKNAGGLWHPDVWFLCDPARDHEPYGGCLGVTLVFVSPSTERYKAFLKEPRATTRYMPVWSQEEVQRCRQLLFDHVPQ-SRVQDLLEQWGGVPRFVLQFADDDTQQAKLQQAIRKCATAGLRATILNAGEDAGSTAALSDKVLHMCTADFVHVR---LMWASQYAFDALCEAQGEASKGELRAFIASSARLPSL-----ATLRGLVFEPYVHRLL 400          
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A836CEN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEN6_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.600e-30
Identity = 93/269 (34.57%), Postives = 133/269 (49.44%), Query Frame = 1
Query:  841 LELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIF---------PHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPSPGTSYKCFDVVFASEYALE 1620
            L+L  GT F+G+R  GS + IR CY +L + I        +  +V+TGTPGIGK+ + +Y L+ LR  G+TVV +    WYRF     VQG  + F  AG+L+DPA    +         F GIT+V V+PR  + +EFLK  +A    MPVWSE+ELL C  ++F         P AR    VR  F + GGV R V        + G +  A    ++G L            +T    D L H+      + K   +++AS+Y  +
Sbjct:   16 LKLPAGTWFMGNRDFGSAIYIRDCYCNLMEQINKLVAARRVQRVVITGTPGIGKTCYAFYWLWHLRQTGRTVVYQLGPGWYRFCGATAVQGSRKAFLAAGYLDDPA----AXXXXXXXXXFGGITLVFVTPRWVRYHEFLKAPAATKRFMPVWSEEELLRCAELLFSGQDLERDVPQAR----VRELFRRWGGVPRYVLQYAHDDERQGTLTAAIHHCSVGDLHAAIRSTGEGTGTTVVLSDKLVHIHTCGAFTSK--RLMWASDYVFD 274          
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A397UD55_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UD55_9GLOM)

HSP 1 Score: 137 bits (346), Expect = 2.260e-30
Identity = 101/330 (30.61%), Postives = 157/330 (47.58%), Query Frame = 1
Query:  811 LTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPS-PG---------TSYKCFDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATLTR 1770
            L  A + NN L+L +GT F+G +K G+ L IR CY  L+ II +  IN       +TG PGIGK+ FGYYLLYLL+ + KT+V  +  ++    ++         F    +L++   WY+ D  G+P       T++  SP+K    EF K     +  MP WS +E+ ECR  IF H   +  V   + + GG+ R VF     + Q   +E A ++ N  LL  V  ++       D+    + H+  + PG         T Y    ++FASE+  E V     +   Q  +  V A+    + ++      RG +FE++AH  L +
Sbjct:   43 LENAKIDNNFLQLPDGTYFLGDKKQGTILYIRKCYLHLADIIFNEKINRCR----ITGNPGIGKTFFGYYLLYLLQKQNKTIVYHKARQYPILFNKQYTFRSDNIFDFNEYLDNTDVWYIVD--GQPPLEVHAKTILFCSPQKQHYKEFDKMIGTSIRFMPAWSWNEINECRIGIFNHLE-IAKVEDLYSRWGGIPRFVFEKALDSSQQNHLEEAINKCNTRLLDFVGEIDHA-----DDISHRIVHIHTNLPGEEEEKEDEETHYVNKFILFASEWVAEKVIDKFEKSYNQQLKNFVTASSSDNEYST-----LRGVIFEQIAHRILQK 355          
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A397UC44_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397UC44_9GLOM)

HSP 1 Score: 132 bits (331), Expect = 2.710e-28
Identity = 102/328 (31.10%), Postives = 153/328 (46.65%), Query Frame = 1
Query:  811 LTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPS-PG---------TSYKCFDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATL 1764
            L  A + NN L+L +GT F+G +K GS L IR CY  L+ II        M    +TG PGIGK+ FGYYLLY L  + KT+V  +  ++    ++       + F    +LN+   WY+ D  G+P       T++  SP+K    EF K     +  MP+WS +E+ ECR  +F H   +  V   +   GG+ R V     ++ Q  ++E A S+ N  LL  V  +        D+    + H+  + PG         T Y    ++FASE+  E V         Q  +  V A+L   + N+      +G +FER+AH  L
Sbjct:   85 LKNAKIDNNFLQLPDGTYFLGDKKQGSILYIRKCYLHLADIIF----KEKMRRCRITGNPGIGKTFFGYYLLYFLSKQNKTIVYHKACQFPILFNKQNTFSSDKIFDFYEYLNNRDVWYIVD--GQPPLEVRAKTILFCSPQKQHYKEFDKMVGTEIRFMPIWSWNEINECRIGMFNHLE-IAKVEDLYSCWGGIPRFVLENALYSSQQNQLEEAISKCNNRLLDFVGEINHA-----DDISHRIVHIHTNLPGEEEENEDEETHYIKKFLLFASEWVAEKVMDKFERNYNQLLRNFVTASLFENEYNT-----LQGVIFERIAHRIL 395          
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A8H3WYS8_GIGMA (Putative crinkler family protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H3WYS8_GIGMA)

HSP 1 Score: 127 bits (319), Expect = 1.430e-26
Identity = 106/359 (29.53%), Postives = 167/359 (46.52%), Query Frame = 1
Query:  781 DEIVTNFAAALTRAVVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQ-KEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHM---LPSPGTS-------YKCFDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATL----TRSVRLEKPTTFSMTI 1812
            DE ++ F   L    ++   L L++   F G +   S + IR CY DL  I+ D  I      + +TG PGIGK+ FGYY+LY L  + KTV+  +       FS+EG +  +   FS   +LN+P  WY+ D  G   +     T+++ SP+K    EF K   + +  MPVW+ +E+ ECR  IF H   +D ++  + + GG+ R V        Q   ++ A   V+  +L  V      E    D+    L H+   LP    +       Y    + FASEY    V   +     +  +  +MA+   + +N    GS RG +FER+AH  L    T ++R+ +P + +  I
Sbjct:  116 DEKLSKFWKVLKNVKISGKFLRLSDNNHFFGKQSQPSVVFIRDCYIDLEGIVFDKKIR----RLRITGNPGIGKTFFGYYILYKLASKCKTVIYHKVNNDPIIFSNEGSIS-KENLFSFNQYLNEPETWYIVD--GHVPKECEAKTILVCSPKKGNYREFDKYIGSTIRYMPVWTFNEIEECRSNIFNHL-GIDKIKNLYMRWGGIPRFVLENAHDKAQQNLLQHAIDTVDETILNYVG-----ETNCPDDVSHKLVHIRTNLPVDEETDVEKVLPYTETYIYFASEYVANEVVVKLKINYKEKLKNFIMAS---SSINEY--GSLRGNIFERVAHQILQGGGTFNIRILEPHSITCKI 456          
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: A0A372Q6T8_9GLOM (Crinkler domain-containing protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372Q6T8_9GLOM)

HSP 1 Score: 124 bits (312), Expect = 2.290e-25
Identity = 100/345 (28.99%), Postives = 154/345 (44.64%), Query Frame = 1
Query:  841 LELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQ----------KEKWYRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPSP------------------GTSYKCFD---------VVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATL 1764
            LEL  G  F+G     S L IRSCY+ L  I++D   N S+ N+++TG PGIGK+ FGYYLLY L    +TV+ +           +E +Y +      Q R        FL++   WY+ D  GK  +  T  T+++ SP+K    EF K   +    MPVWS  E+ +C+  ++ H ++ + V+T F+K GG+ R V    T      K++ A    +  +L  V A E        +T   L H++ +P                  G   +  +         + FASEY  E V   +  R     +  + ++L     NS +G     + FE +AH  L
Sbjct:  169 LELPKGVHFLGEINEPSTLFIRSCYRHLLDIVLDN--NSSVRNLIITGNPGIGKTYFGYYLLYNLIQRNQTVMYDSHSTGHVIVFDQEAFYLYEVLNADQIR-------AFLSNANNWYIVD--GKEPQKATAKTILVCSPKKAIFKEFEKFQLSSTRYMPVWSYAEISKCKDKLYNHLQN-NLVKTLFDKWGGIPRFVLEKATDYSHQCKLQEAIDACDFDILDYVGATE------AKDTSHKLIHIVTNPLVVDVNIVNEQEQTDVDGGNDVEYIEEDPPYSQKIIKFASEYVAERVIMRLELRNRGKLRRDLFSSLSEGTSNSVLG-----RYFEEIAHQLL 490          
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: W4FCC5_9STRA (Crinkler domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCC5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 6.350e-25
Identity = 105/327 (32.11%), Postives = 154/327 (47.09%), Query Frame = 1
Query:  823 VVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKW--YRFSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALF---HMLPSPGTSYKCF---DVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQMFERLAHATLTRSVR 1779
            VV +  LEL  G   +G+  +G K+ IR CY  L K+      +    ++V+ G PGIGK+ FG ++L  L  E KTVV E       Y FS + VV+G    F    FL  P  +Y+ D   KP++    +T++L SPR +    F   D+     MPVW+ DE+L CR++++P    V+ V   F + GGV R V            +ERA   VN   +  V A+ ++         DA+F   H L     + K F    VVFAS Y  ++V + + + ++      + A+     L     G  RG +FER  HA L R  R
Sbjct:  157 VVADAILELPVGAFLLGYPALGLKVYIRPCYPPLWKVCWKLIQDPKSPHLVILGNPGIGKTFFGIFILLQLARENKTVVYESGASMCRYLFSGDTVVEGTQNDF--VAFLRLPTTYYIVDAV-KPQK-CQAMTILLTSPRHEVWFSF-NNDNCDFRYMPVWTLDEILSCRKLLYPDL-DVNMVTDCFHRWGGVPRYVLENMLRDTHQSLLERALGMVNCDWV--VNAIGEL---------DAMFEASHRLLHYDVNEKTFINKHVVFASPYVQDVVYRRLCKDDHDKLVKFLAASEGIDQL-----GVVRGIVFERYVHAVLPRGGR 461          
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Match: M4C1F8_HYAAE (RxLR effector candidate protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1F8_HYAAE)

HSP 1 Score: 119 bits (298), Expect = 1.240e-24
Identity = 92/277 (33.21%), Postives = 142/277 (51.26%), Query Frame = 1
Query:  823 VVTNNTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDN--IVVTGTPGIGKSVFGYYLLYLLRLEGKTVVLEQKE-KWYR--FSDEGVVQGRFETFSDAGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLLVMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQVGK---MERATSQVNLGLLRQVCAVEQVEFLSTD-ETGDALFHMLPSPGTSYKCFDVVFASEYALELV 1626
            VV +  + L  GT  +G +K+GS + IR CY  L K+ +D   + ++ N  +V+ GTPGIGK+ FGY +L+ L   G TVV E +E KW R  FS + VVQG +  F+       P  +Y+ D  G         T+++ SPRK   +++ +++ A +L MPVW+E+E+  CR +++     V+ V   F K G VAR V     +A+   K   ++ A  Q +L    +V     VE    + +    L H   +    Y+ FD  FA+ Y  E V
Sbjct:  158 VVADAVIALPEGTFILGVQKLGSVIYIRHCYSQLWKLCLDTLNHAAIANHCVVILGTPGIGKTHFGYLVLFHLAHTGATVVYETREDKWTRTLFSGDKVVQGLWTDFNQV--HAQPETFYVVD--GVEPSRCDAKTILVTSPRKRIWHKYSQRNGAKVLFMPVWTEEEIYRCRDLLYSDT-PVETVEKRFCKWGDVARYVL---RYAKDKAKQKVLKEAIGQADL----KVIVSASVESSGVECDVSHRLLHFRVTRDFGYEGFD--FATNYIAEKV 420          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig908.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFB9_9PHAE2.310e-9446.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCR9_9PHAE8.950e-3757.03Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835Z6Q5_9STRA2.940e-3332.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEN6_9STRA1.600e-3034.57Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A397UD55_9GLOM2.260e-3030.61Uncharacterized protein n=1 Tax=Gigaspora rosea Ta... [more]
A0A397UC44_9GLOM2.710e-2831.10Uncharacterized protein n=1 Tax=Gigaspora rosea Ta... [more]
A0A8H3WYS8_GIGMA1.430e-2629.53Putative crinkler family protein n=1 Tax=Gigaspora... [more]
A0A372Q6T8_9GLOM2.290e-2528.99Crinkler domain-containing protein n=1 Tax=Rhizoph... [more]
W4FCC5_9STRA6.350e-2532.11Crinkler domain-containing protein n=3 Tax=Aphanom... [more]
M4C1F8_HYAAE1.240e-2433.21RxLR effector candidate protein n=1 Tax=Hyaloperon... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig908contigP-littoralis_Contig908:60212..70395 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog272952.HpaP802584
Model size3997
Max annot lvl4776|Peronosporales
Hectar predicted targeting categorychloroplast
Exons4
Evalue2.19e-25
EggNOG OGs2CQRH@1|root,2R5I5@2759|Eukaryota,3Q7MI@4776|Peronosporales
DescriptionCrinkler (CRN) family protein
Cds size1779
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig908.26.1prot_P-littoralis_Contig908.26.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig908 60498..63840 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791813.9730382-UTR-P-littoralis_Contig908:60211..602961680791813.9730382-UTR-P-littoralis_Contig908:60211..60296Pylaiella littoralis U1_48UTRP-littoralis_Contig908 60212..60296 +
1680791813.987082-UTR-P-littoralis_Contig908:60348..604971680791813.987082-UTR-P-littoralis_Contig908:60348..60497Pylaiella littoralis U1_48UTRP-littoralis_Contig908 60349..60497 +
1680791814.0253658-UTR-P-littoralis_Contig908:63840..655271680791814.0253658-UTR-P-littoralis_Contig908:63840..65527Pylaiella littoralis U1_48UTRP-littoralis_Contig908 63841..65527 +
1680791814.036069-UTR-P-littoralis_Contig908:70098..703951680791814.036069-UTR-P-littoralis_Contig908:70098..70395Pylaiella littoralis U1_48UTRP-littoralis_Contig908 70099..70395 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791814.0016096-CDS-P-littoralis_Contig908:60497..610411680791814.0016096-CDS-P-littoralis_Contig908:60497..61041Pylaiella littoralis U1_48CDSP-littoralis_Contig908 60498..61041 +
1680791814.013567-CDS-P-littoralis_Contig908:62605..638401680791814.013567-CDS-P-littoralis_Contig908:62605..63840Pylaiella littoralis U1_48CDSP-littoralis_Contig908 62606..63840 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig908.26.1

>prot_P-littoralis_Contig908.26.1 ID=prot_P-littoralis_Contig908.26.1|Name=mRNA_P-littoralis_Contig908.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=593bp
MRLILLLLLCCVAPGATFVANVAPSAPSKSRLGRHDDGTRSSSSAFPGRH
PLFPHALRVRPDGGGRDDTPGKNYSELRVVDKKVDAVEEDIQAVGREIGS
VGEKIEAVEAALSGRPPYLGITDRDLLLKEEEQLRKEEEQLRKKKEQLCK
EEEQLRKEEEQLREIELLLLKKRPAAAVSLAVDEIVTNFAAALTRAVVTN
NTLELANGTVFIGHRKMGSKLSIRSCYKDLSKIIIDGAINGSMDNIVVTG
TPGIGKSVFGYYLLYLLRLEGKTVVLEQKEKWYRFSDEGVVQGRFETFSD
AGFLNDPAGWYLSDPEGKPREGFTGITVVLVSPRKDKTNEFLKQDSACLL
VMPVWSEDELLECRRMIFPHARSVDDVRTAFEKVGGVARAVFGPKTFARQ
VGKMERATSQVNLGLLRQVCAVEQVEFLSTDETGDALFHMLPSPGTSYKC
FDVVFASEYALELVEKAVSEREYQDFQGHVMATLEHADLNSKVGGSARGQ
MFERLAHATLTRSVRLEKPTTFSMTILSNSGKDVLGGGELSLNFTRIKEF
GGEAFPRKSLRRGPTIGQRARLFQLLTRSLWTAVLVHFTFSR*
back to top

mRNA from alignment at P-littoralis_Contig908:60212..70395+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig908.26.1 ID=mRNA_P-littoralis_Contig908.26.1|Name=mRNA_P-littoralis_Contig908.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10184bp|location=Sequence derived from alignment at P-littoralis_Contig908:60212..70395+ (Pylaiella littoralis U1_48)
GCAAGATTCAACGAGCGGAACAAACCCATGTGCCTTTGATTCACACCACC ACCGCCAACCGCCGCCGAGGGGCTACACACCGCCACCCAAAGGTTATGGC TCTGTATGGCATACAGAGCCATAACCTTTGCCGCCACCCCCAACCGCATC CGAGGGGCTCAGCTGGTCGGTGTCGTTTATATGGGTACCCTCACCATATA TTTGTCCCGACATTTTTATTTTCGTCGCGAAACTCACGAGCTTTCCATTC CACTCCTGATGGGTGCCGCTCAGCCAGGTCGTGGCAATGCGTCTGATTTT GCTGCTGCTGCTGTGCTGTGTAGCTCCCGGGGCAACATTCGTTGCGAATG TGGCACCGTCTGCCCCCTCGAAATCTAGACTTGGGCGGCACGATGATGGC ACGAGGAGCTCCTCGTCAGCTTTTCCAGGGCGGCATCCTTTGTTCCCACA CGCGTTGAGGGTACGTCCTGACGGCGGGGGAAGGGACGACACACCCGGCA AGAATTATTCCGAACTCCGGGTCGTGGATAAGAAGGTTGATGCCGTCGAG GAGGACATCCAGGCTGTCGGGCGGGAGATCGGTTCCGTGGGGGAGAAGAT CGAGGCGGTGGAGGCTGCGCTCTCTGGGCGACCTCCTTATCTCGGCATCA CTGACCGCGACCTCCTGTTGAAGGAAGAGGAGCAGCTCCGTAAGGAGGAG GAGCAGCTCCGGAAGAAAAAGGAGCAGCTCTGTAAGGAGGAGGAGCAGCT CCGTAAGGAGGAGGAGCAGCTCCGGGAGATAGAGCTCCTCTTGTTGAAGA AGCGACCAGCCGCAGCGGTTTCGCTCGCAGGTGCGTGCGAATTGTAGCAA CCCTCAGATCACGTCGCTTACGAATGTAGCAGATTAACCCTCAGATCATG GGCAGGGGGGCGTAGGAGCTCGAACCGGCGCTGCAACAACATCAAGACCC AGCAGTAGTAGGTTCAACCTTGGGATTTATTTTTTTGCCGGCTTAGCGAG GTGAGCGAGTCCCAAGATGCGTGAGAGAATATTTGTGGACACGCGAATCC ATGAATGAGAGGGGGGCGAGTGGGCGAGTCCTTACTCCGGTAGGCATGAT GACATTTTTTTTTTTGTCCTTTTTGGCATCACTAGAGAGACGAGGCAGAC TCCCCCAGCTGCTGCTGTTCCCGTCCTCTTGTTCTTCGTCTTTACACTCC TCCCTCTGCTGTTGCTGTTTGAAAGCTTGCTCGTAAATCTTACTCATCGC GGGTTCATGTGTTTTCTGTGTGTGGGTGTGTGGACCACGTTTTTGTGCAT AATCCCCGGGGTAGATTCCCCCCGGGGTAGGTAGCGTTCACAAGGTAAAG ACCGACCCCCCGGGGTACTTGAATCTCCCCCCGGGGGGGTTGATTTCAGC GAACCCTTCCCCGGGGGCAGAACTAAGCAACGTACGGTAACTACGTCATT CGGTGGATTCAGATACCCGTCTATCAATCAAACTATACCGACTTTTTGGA TCTAGACGCACGAGCGTGCAGCATTTCACATTTTGGCTCTTCAGATCTCA GCGAAGCGGCTCATTTTTGACCCCTCTCAGATTAATTTGCTGAGCGTCGC CCGTCTCCGCGCGTGCGCACCACAGTAGAACTCCCCCCTTCGCGAGTGAG CCCCCGAAATTCTTTCCTATGCGACCGTGCTGCGCAGAAGGGCTAATTCG TGCGCGCTCGGTTTAGGCGAGGTCCGTGAAACCCAGTGAGAACACTACCA AACTGGCTGATGTTGATGTCGCTACAAAACTTTCACTTTCCACGCCTGCG GCAAAATGCAAAAATGCAAAAATTTGGCAGCGAAGCGTTCACCCTCTCAG CGCCCCCCGAGACGGCAAGACAGGCCCTGAAAATTCAGTAGTCTGGGAAA CAGCAGTAGTGTCAGGCGCTCACAGGACGCATACCACAGCACATGAGTAG GCAGTATCTCAGCCTAAGAACGTTCAATGTACGTGTCCGTTCTGTAGCTG TCCCGGGTTGAGATCTAAGGCCGAGCCGCGTGTGTATGCGCGAAGAAAGC ACCTTTTGGCAGTCCCGCGCTGAAGAATCCTCTTCTTTTGACGCAATAAA ACATATTGGATTCTCTTTTTCGTTTTTGCCACTCGCATCAAAGAGACCGT ACTCACCCTGTCACCCTTGGTATGCCGGGTAACAATGACACACACTACTA TACGCTCACTGGAGGACGGGGGGCCTGACACTGACCATATGCATGTACCT TAGAGTGTAAAAAGCCCTTGTTCCCTTATACAAATGCTGTGATACGTTTC GTCGCGAAAGTTGCTCCATGTGTGGTCTAGCATCTATTTTTCCGTCATCT ACCGTCCTTTATGTACGTACCCGTTGCCCGTTTGCCCGTCGCAGTCGACG AGATCGTCACGAATTTTGCGGCCGCACTCACCCGAGCCGTGGTAACCAAC AACACCCTGGAACTGGCAAACGGCACGGTCTTCATTGGCCACCGCAAGAT GGGATCCAAGCTTTCTATCCGTTCTTGTTACAAGGATTTGTCGAAGATAA TAATCGACGGCGCTATCAACGGTTCTATGGACAACATTGTTGTCACAGGC ACACCTGGAATCGGCAAATCTGTGTTCGGCTACTATCTATTGTACCTTTT GCGCCTAGAGGGTAAAACGGTTGTTTTGGAACAGAAGGAAAAGTGGTACC GATTCAGCGATGAGGGGGTGGTGCAAGGGCGTTTCGAAACTTTTAGTGAT GCAGGGTTCCTGAATGACCCCGCAGGTTGGTATTTGAGTGACCCGGAGGG CAAGCCGCGCGAGGGTTTCACTGGTATTACAGTTGTTTTGGTGTCGCCTC GGAAGGATAAGACAAACGAATTCCTGAAGCAAGATTCTGCTTGTCTTCTA GTCATGCCCGTGTGGAGCGAGGATGAGCTGTTGGAATGCCGACGAATGAT TTTCCCTCATGCTCGAAGTGTCGACGACGTGAGAACAGCTTTTGAAAAAG TTGGGGGTGTTGCAAGAGCAGTTTTCGGACCCAAAACGTTCGCACGTCAA GTGGGGAAAATGGAGAGAGCGACGAGTCAGGTAAATCTAGGTTTGCTCCG CCAGGTTTGCGCCGTTGAACAAGTTGAGTTCTTGTCGACCGATGAAACTG GCGACGCACTCTTTCATATGCTGCCGTCGCCTGGCACATCGTACAAGTGT TTCGATGTCGTCTTTGCCAGCGAATACGCGCTTGAGTTAGTTGAGAAAGC AGTTTCTGAAAGGGAATATCAGGATTTTCAAGGCCATGTGATGGCCACTT TGGAACACGCCGACCTGAATAGCAAGGTGGGAGGCAGCGCACGGGGACAA ATGTTTGAAAGGTTAGCACACGCGACCCTCACTAGATCAGTAAGGTTAGA GAAACCTACGACGTTCAGTATGACAATCTTGAGCAATAGCGGCAAGGATG TTTTGGGAGGCGGGGAGCTGAGTTTGAATTTCACTCGGATCAAAGAATTC GGGGGCGAGGCGTTTCCTCGAAAAAGCCTTCGCAGGGGACCTACTATCGG CCAACGAGCCAGACTTTTCCAGCTGTTGACTCGTTCTTTGTGGACCGCAG TACTGGTACACTTTACTTTTTCCAGATGAAGTCTGCGGGCGTGGAGGTGA TTGAAACAGGAGCTAGTCTAGAGAAGTTTTGGAAGACTGCTTCGAAAAGC AAGTCCATCACGAAATGTGTTCTTGTGTACGTAGTTCCAAGTATCAACTG GCAGAATGCGGCTGACTTGACCGCAGGTGGTGATTGCTTGAAGGGAGCAA CGGCCGATTTTAAATCGGAGTGTGTTGTTTGCGCGATACACTTAAAAGAG TCACTTGTATGGCTGAAGTGATGCGATTTAGCCTGTACGCTCCAAATTGA AGAAGTTCCTCTTTGACTCTCCCCTCTCGTTTCTTCTGCCTTGCCGATAC CATCGGCAAGTACCCGTCTGACCCAACGCTCGTCAAATCCGACCCGTAGG CGAATACGGCCGGATCGTGGGGCGGCCGAAACCGGGATTAGCAGCCCGTG GACCCTTCCTTTCGCGTGGAGCTCTAGCGAGAATTGTCCGATTATGCTGT GGCCTAGACGAGTATTTTTTTGGGTTTTGTCTTGGATTGGTTGTCAATGT CCATCCATGCGGGTTGGAATGGCGCTCGATCGCTTGGAGCAGTGTAGTGA AGAAGTGGAGGTCAGGCGGGTGCGAGACCCAGCAGTGGCACGATCCTCAG GGCTTGGCACCAAGGATTGCGAGTGGAAAGTTGTTCAGACAGTTTGAAGT TATCCACCTTCATGTTTTCATACAAACTTTTCCACAACGTCGCATGGAAC TTCCATGATATTTCCTTGATGCGTACGGATGGAACATCTCGATATTCTGC GTCCGTGAAAAATCCACGTACAGTAGTCGGTACGTGATCCTCTTGATTTC GGTGGTTTTGAATACATACTGCTCCCACTGATCGTGAATACAGCAGTACC GGCCCGATCATAAGTAGTAGCGTTTTTTTAAGAAAGTGAGGCTCAAATAT TTCAAAACTTAAAAAAAGTTGGAGATGAGAAAGAAGGCTCAGCGGCCGGC GGCACACTAAACCCTTTATGATGGCTAGAGATGGCCATGTTCGATGCTGG CGACACAACAAGAAAGCTAGCCTCGGCCGAGATATCGGTTTCTTATGAGC GGGCCGATACTGTACAAGTCGAATTTGTCATAACTCCGTTATTTAGTGGT TGGTTGTGGGACGTCGGATAAGTTCAAAACACGATGGAATTCCAATTTTC AGTTTGAAAAGTGGTGCAGTATCCGGGAATAAAATATTCACTAATCCGAC TCCACATCGGTCTGATCAGGGTAGTTCTGGTCGTCACCCCAGAAGTCGTC GTCGGACCAGTCGTGAAAGCGCCTGGGCGTGTCACTGGCCATCAAAGAGC GGGGGCTCGGAGGCTTAGCCTCCTCGAAGCCGCCCGTATCCTCCGACTCC GTGGTCTCGGGCATGACGTCCTCCTCCACCACCACGCATGGGGCAGCGGC CTCTTCGTCGGCGCCGCCCGTACCCTGGTTTTGAGGTTAGGCGTTTCAAG TTGGGCATTTCAGGTGAGGCCTTCAGATTGGGTTTTCAGGAGGGGTTTTC AGGTTGGGCGCACGCTTTGCGTGACAAAGCGCTAATGCTTCCTATCCCGC CTACGAGCTAGTAGCTGGACGACCTACTTTGTTGAACGCCGGGCTTGTCT CCAACCTGCGAAAGCTCGAGTCTGCCCGATGTCGGGTTGCATAACAAGTT TCGCCTCCGTTTCCTTTGTGAGCACATGTTATGAGCAGCCAGTGGGTATA TATGTCGAGCGAGGCAGCGAGTCTCTGTTCTGCCTCGTTCTGGAACGCAA ACACCAACTCATAGAGTACTCTGTTACATGCCGCTGCCATGCAGAGCTAA AGGCGGGGCATGCATGACAGAGTCTCATTATACCCCGAATACGCATGCAA AAGCAGGGTATCTGACCTTGGGGTCCGTAGTAAGACATGTCGACTGGCTG GTCACCGAGATCGAGGAGCTCACGTACGCGATGAAGGAAGAAGCTCGGAA GCTGATGGTATAGCTGTGTCGTTCTTAGACGGAAAGGATGTGGCTAGAGT TGTGCTGTTCAGCGGGCAACTCGGAAGTGAGAAGGAAGGGCTGAAGTGGC TCGTTCGACGGGGGGCTCAGCGAATAGACTTCAGTCGATACGCTGGTACC CTCTGCAGTACCCGAAGGCTTCCTTCAAATGGAACCCCTTCGGTGTAACG GCCATGAACCATAACATCCCCCCTAGCATACTACGCAGTGCAGACGTAGT ATGATACCTCACATTCTTCTAGGCGTAAACTGAAGGTAAACAATTTTACA CAATCGAAATGCCTCGAGGCTAGGTAGTTGAGAGAAACTAGGCCGCGTGG AAGGAAAGCGTCGAGAAAAACCTTCCCCTAGTTTGTCTCTACCCGACATT TCAATCTCCAGATACGTTAAAAACAGGCCATCATGCGCTACGGGCAACAG CACCAAAGGGATCGAGTACAGTGCTCAAACTACTAAACGTTTTAGCAGCT GAGCACTTCTCCACCGACGAAACATCAATCTCAACGCAGACAAGGAAAAC CTCCCTGAGGACAAAAACCTTGTGCAAAACAAATGTAAAAACGCTAAGAA GGGTAGGCTCCGTTTGAGGGGAAGCCGACTTCATTTACTCGACAGAAACG TTGGAACCAAAACACCAAGCGCTACTTGTAGGGAAGGTAAAACCCGTTTT TTGGGAAAACCCTTCATGTACAGTCTAGTGACAAGGGAGACAAAATGAAA GCGAAACCAAAAATTACTTGTGGGGAAGGTAAAACCCGATTTCTGGGAAA ACCCTTCATGTACAGTCTAGCGATAAGGAAGACAAAATTAAATCGAAACC AAAAGTTACTTATGGGAAGGTAAAACCCGATTTCTGGGAAAACCCTTCAT GTGGGGAAGGTAAAATCCGATTTCTGGGAAAACCCTTCATGTGGGGAAGG TAAAACCCGATTTCTGGGAAAACCCTTCATGTGGGGAAGGTAAAACCCGA TTTCTGGGAAAACCCTTCATGTACCTTCTAGAGATAAGGAAGACAAAAGG AAAGCGAAACCAAAAGTTAGATGTGGGGAAGGTAAAACCCGATTTCTGGG AAAACCCTTCATGTACAGTCTAGTGGTAAACAAGACAAGAGGAAGCAAAC GCCCGAAACTACTTGCAGGGAGGGTAAAAACCATTCATGGAAAAACCCCT CAATTTACGTTCTGGATACAAGAAAGACAAGAGAAAGGACGTACGACGGT CAACAACTCTATGCAGGCGAAACCATCAGTTACTGTTGCTGCGATAGGCG TCAAGCGTCTTTCATGTTTCTCACTGAACCAAGGGACGATATACGAGTTC CAACAACGCTTGACGCTGCATAGATGAACCGAAAGCAGAGAGAAAATAAG AAAACCCGACTTCACTCGCCAATTCCCCCCCCCCCCGAATATCGTGCACC ATGTTTGAACAAGAAAACTCAGCGTCAAGCGCTCAACACCATAAACATTG CAACGGGGCGCAGTCTCGAATTCCTCAGTCTCGGGAGTAAACGCTTGAGT TCGGTGCGGGTATTGGCTTCTCGGTTGGCGTCGTTGTAACGCTCTCCGCA TCATCCATTCTTCAAGTCGGTATACACCTGGACAAACGGAACCGGACAGC ACTTCGCGACACAGGAGCACGACACTAATTCGAGGCGGAATACAGTATAA TTAGTCTGCCGCAGGCAGCGGCAGTAGCGGTAGCGTTACAAGGTAGTGCA ACGACCGTATGCTAAGGCGTTGCATTCGTTTTCGCCTGATGACTCGAGAC GACGCGCGGTTATGCATACCCTACGTAAGACGCACTTTCCTCCCTTGCAT AAAGCGTGGCGGAGGATACATACAGTAATGGCAATCAATCATGCCGATGC CGTTCTTGAGATGAGTCAAACGCAACAGGGCAGCAGGGTCGTGCAGATGA ATCGAAACAGTATCTCACCCCCTGGCTAGTATGACTATTAACCCCTCTGA TCTTGTATCATATCAATCTACACGAGGCACACAAAATGTCAAAACTATTG TGATGTGTTTCCGCCAAGGGCTCGGAACAACAGTGGTGTGTCCGCAGTCT ATCGAGTATTTGCATATATATTTCGGTCTGTGCACTTCACCCAAAGCTAC AAGCCGGGATGTGACTGTCTCAAGGCTGCGTCGACGGCAACACGTGTTTC GCATCGGTTGACGGTGAGCGACCATGGCCCTTCGTCGTGCGAAGATGCGT CTCCGCGTATATTACCCGATGTAACGCGCCTCGCCCTGCCCCTCTTGTAG AAAGCGCTGCAAAGGAAGCTCTGCCACCAGTATAATGGAGTATATCATCG GCAAGGGATGGGGCAGCGAGAGGACGTACGGGAACACCGACAGCAGCGGA ATGCAACAAAACAAAGCTAGCAGGCAGCGGCGGGCCATAACAACCGAAAA GGGCGAGCAGGTAACGCGATGTGGCAACAAGACGGAACAGGCAGCGGCAA CGACATGGCGGCAACGACATGGCGGGAGAGACAGGCCACTCGGTGAACTT GCAGACCAGCAACTACCAGCCACCTGGTAATTGACAGGCGAACGGATAAA ACAGAACTGCCAGACGGCTAGCAGACACACGGGACAGGGCCGACAGCAAC GACAGGAAGACGGACGAACAGGCAGACAGACAGGGCAGACGGAAGAGAAG AGGCAACAGCAGAAGCGGCAGCAACAGCCGAAGAAACAGCGGGAGCAGCA CAGCAGCAGCAGTAGCGACGGCAAACATACACCCAAAACCAATGGACGGT ACTGGGCGCATGGTGCGCCTTTTCTGTGTTTGCTGCAACTGCAGTACGCG AGCATGTGCACGCAGGTTCTAGCCGTCTGATTCACTTGTCAGAACATGCG GCATGCATGACCCGCCCCGGAAAAAAAACATGGAACAAAGTATGCAAGCC GCTGTAATTGAGAAGGCACAGAAGAGAAAAAACAGTCAAGACATCGGTCT GCCATTCCATGGGTTCCAGAAGGTGTCATGCAGTACACGCAAGTGGCTGT TTGGCACATATGGAACGCCATGAGGAATGTAATATGCAATACTGCTGCGT CATTCATACGAAAACAACTTTGAACGATCAAGAATAATATTAAAAAAAAT GATACCATCGTCGCATTCCTTGTTGTCAAGAATGTGCCATGCAGTACACT AAAGTGGCTGTTTGGCACGTAATGAAGAGACCAGAAGAAAGAAAAAAAAG TAGAAAAATAACTTGTCTGTCGTCGCATTTTCCGTGTTGTCAAGAATGTG CTATGCAGTACACGAAAGTGAGTGGCTGTTTGGCCCATTACGAAGAGAAA AATTTATGTAGCCAGGGGTAGTATGATAAAACCAGAGACGAGTGAACAAA AAAATACAAGCCGAAAACAAAGAAGACGAGGTCGATTCAAACAAGAGTAT TGAAACAAAGGAAACCCGAGTTCGATTCTCGGATTGGACACCATGTTATA AGCAGCCAGTGGGTATATATGTCGAGCGAGGCAGCGAGTCTCTGTTCTGC CTCGTTCTGGAACGCAAACACCAACTCATAGAGTACTCTGTTACATGCCG CTGCCATGCAGAGCTAAAGGCGGGGCATGCATGACAGAGTCTCATTATAC CCCGAATACGCATGCAAAAGCAGGGTATCTGACCTTGGGGTCCGTAGTAA GACATGTCGACTGGCTGGTCACCGAGATCGAGAAGCTCACGTACGCGATG AAGGAAGAAGCTCGGAAGCTGATGGTATAGCTGTGTCGTTCTTAGACGGA AAGGATGTGGCTAGAGTTGTGCTGTTCAGCGGGCAACTCGGAAGTGAGAA GGAAGGGCTGAAGTGGCTCGTTCGACGGGGGGCTCAGCGAATAGACTTCA GTCGATACGCTGGTACCCTCTGCAGTACCCCGAAGGCTTCCTTCAAATGG AACCCCTTCGGTGTAACGGCCATGAACCATAACACACAGCCTCGAAGAAG TACCATGTGGCCCCGACGGGCTTGGGTACCCTATCGAGCAGCTGAAGGAT TGCGCCCCTTTGGTGAAGGTGAGTTTTGGAATGGACTTCTTGTTCCCTTG GTTTGTTTCGTTTCTCTCTGGTGCTCCTTGAGCCCATATCGCGCATTTGT TGGTTCTTCGTTTACGTTCGTGGTAATGCCTGGGGTCGCAAGGGCTTGTG CTAGAGCGATTGCCTCGCGTTGTTCCCTAACGTCGCCTTTATGTTCGTGC TCGCTTGGGTTTTCCTTAATCGTCGCTGTGGATCTTGCGCGTGGCAGTTG GCACCGTGTCAAATGTGGACCTGCCCCGGAACCAAGTGCTGTGGATGCGG CTGTGAAAGCAACCGGTGCAGCAGTGCTGGACGGGATGGGCACGGAGGTC CTTAACTCCGCTCACAATGATCCGGTCCCGATGTTTGCCGAGGGGGCGAC GGTGGAACAGAAACAGCGGTTTAAAGATCTGCAGGGCACGGCTTACAAGT TCCTGAGCGACTTCATGCAGGAAGCCGAGCCGTTAACTCCTCGGCGTTTG TCAGCGTGTCTTCCTTGCTGTCGCCCAATCACCC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig908:60212..70395+

>mRNA_P-littoralis_Contig908.26.1 ID=mRNA_P-littoralis_Contig908.26.1|Name=mRNA_P-littoralis_Contig908.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1779bp|location=Sequence derived from alignment at P-littoralis_Contig908:60212..70395+ (Pylaiella littoralis U1_48)
ATGCGTCTGATTTTGCTGCTGCTGCTGTGCTGTGTAGCTCCCGGGGCAAC
ATTCGTTGCGAATGTGGCACCGTCTGCCCCCTCGAAATCTAGACTTGGGC
GGCACGATGATGGCACGAGGAGCTCCTCGTCAGCTTTTCCAGGGCGGCAT
CCTTTGTTCCCACACGCGTTGAGGGTACGTCCTGACGGCGGGGGAAGGGA
CGACACACCCGGCAAGAATTATTCCGAACTCCGGGTCGTGGATAAGAAGG
TTGATGCCGTCGAGGAGGACATCCAGGCTGTCGGGCGGGAGATCGGTTCC
GTGGGGGAGAAGATCGAGGCGGTGGAGGCTGCGCTCTCTGGGCGACCTCC
TTATCTCGGCATCACTGACCGCGACCTCCTGTTGAAGGAAGAGGAGCAGC
TCCGTAAGGAGGAGGAGCAGCTCCGGAAGAAAAAGGAGCAGCTCTGTAAG
GAGGAGGAGCAGCTCCGTAAGGAGGAGGAGCAGCTCCGGGAGATAGAGCT
CCTCTTGTTGAAGAAGCGACCAGCCGCAGCGGTTTCGCTCGCAGTCGACG
AGATCGTCACGAATTTTGCGGCCGCACTCACCCGAGCCGTGGTAACCAAC
AACACCCTGGAACTGGCAAACGGCACGGTCTTCATTGGCCACCGCAAGAT
GGGATCCAAGCTTTCTATCCGTTCTTGTTACAAGGATTTGTCGAAGATAA
TAATCGACGGCGCTATCAACGGTTCTATGGACAACATTGTTGTCACAGGC
ACACCTGGAATCGGCAAATCTGTGTTCGGCTACTATCTATTGTACCTTTT
GCGCCTAGAGGGTAAAACGGTTGTTTTGGAACAGAAGGAAAAGTGGTACC
GATTCAGCGATGAGGGGGTGGTGCAAGGGCGTTTCGAAACTTTTAGTGAT
GCAGGGTTCCTGAATGACCCCGCAGGTTGGTATTTGAGTGACCCGGAGGG
CAAGCCGCGCGAGGGTTTCACTGGTATTACAGTTGTTTTGGTGTCGCCTC
GGAAGGATAAGACAAACGAATTCCTGAAGCAAGATTCTGCTTGTCTTCTA
GTCATGCCCGTGTGGAGCGAGGATGAGCTGTTGGAATGCCGACGAATGAT
TTTCCCTCATGCTCGAAGTGTCGACGACGTGAGAACAGCTTTTGAAAAAG
TTGGGGGTGTTGCAAGAGCAGTTTTCGGACCCAAAACGTTCGCACGTCAA
GTGGGGAAAATGGAGAGAGCGACGAGTCAGGTAAATCTAGGTTTGCTCCG
CCAGGTTTGCGCCGTTGAACAAGTTGAGTTCTTGTCGACCGATGAAACTG
GCGACGCACTCTTTCATATGCTGCCGTCGCCTGGCACATCGTACAAGTGT
TTCGATGTCGTCTTTGCCAGCGAATACGCGCTTGAGTTAGTTGAGAAAGC
AGTTTCTGAAAGGGAATATCAGGATTTTCAAGGCCATGTGATGGCCACTT
TGGAACACGCCGACCTGAATAGCAAGGTGGGAGGCAGCGCACGGGGACAA
ATGTTTGAAAGGTTAGCACACGCGACCCTCACTAGATCAGTAAGGTTAGA
GAAACCTACGACGTTCAGTATGACAATCTTGAGCAATAGCGGCAAGGATG
TTTTGGGAGGCGGGGAGCTGAGTTTGAATTTCACTCGGATCAAAGAATTC
GGGGGCGAGGCGTTTCCTCGAAAAAGCCTTCGCAGGGGACCTACTATCGG
CCAACGAGCCAGACTTTTCCAGCTGTTGACTCGTTCTTTGTGGACCGCAG
TACTGGTACACTTTACTTTTTCCAGATGA
back to top