mRNA_P-littoralis_Contig908.16.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig908.16.2
Unique NamemRNA_P-littoralis_Contig908.16.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Match: D7FKS6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS6_ECTSI)

HSP 1 Score: 494 bits (1272), Expect = 6.130e-162
Identity = 254/337 (75.37%), Postives = 285/337 (84.57%), Query Frame = 3
Query:  699 QYQ-PRAGRDIYGSEGSRFHIKFDSAQGPRRSTR-RFDPDAGSVPSSTITPGDVVMVGGVSAGIAAVQRYNRKRFLEE--NGQDDSSPTLPARAGRKGGNKQEAVVTSLQLSLYCDRNGGQGDLLATLDKLSQTSDVNSPRGLSALISEVCLALLRSDRDWIGGTGGVKTYLPNVRSNNRGKKPSPASRAKRDFNRATMRERSKWEREAVSNTPDRGFSSSSAPSWGGSNAQKGGTYVVVTLLVAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASALTLLEWLGDEAAEGRGENVEDVEVLWTPADHDDSLDRDELDAKWPELRVL 1697
            +YQ PRAGRDIYGSEGSRFHI+FD  +G RRSTR RF+P  G  PS++ITPGDV M+GGVSA +AAVQRYNRKRF++E  +GQ  S+P LP R+GR GG+ Q AVVT+LQL LYCDR GGQGD+LATLDKLSQT+DVNSPRGLS LI+EVCL LLRS RDW+GGTG VK Y    RSN+RGKK SP SRAKRDFNRA MRERSKWERE VSNTPDRGFSSS+APSWGG +AQK GTY V TL+VAWSGL STPP+AEPR+G WF +D   R+DD+ + FSVVNR SALTLLEWLGDEAAEGRGENV DVEVLWTPAD DDSLDR++LD KWPELR L
Sbjct:  205 RYQRPRAGRDIYGSEGSRFHIRFDGGRGGRRSTRARFNPYDGDAPSTSITPGDVAMIGGVSAAVAAVQRYNRKRFVDEEGSGQRPSAP-LPPRSGR-GGSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFTRDSRDRDDDRGVEFSVVNRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 539          
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Match: A0A0M0K0F2_9EUKA (Membrane protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K0F2_9EUKA)

HSP 1 Score: 82.0 bits (201), Expect = 1.040e-13
Identity = 71/235 (30.21%), Postives = 109/235 (46.38%), Query Frame = 3
Query:  990 QEAVVTSLQLSLYCDRNGGQGDLLATLDKLSQTSDVNSPRGLSALISEVCLALLRSDRDWIGGTGGVKTYLPNVRSNNRGKKPSPASRAKRDFNRATMRERSKWERE--AVSNTPDRGFSSSSAPSWGGSNAQKGGTYVVVTLLVAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASALTLLEWLGDEAAEGRGENVEDVEVLWTPADHDDSLDRDELDAKWPEL 1688
            Q      LQ++ YCD    Q  L   L+K++ ++D +S  GL +L+S+ CLA+LRS +DW+      ++ +  +  N+              +NR  + ERSKWE E  A+  T                 A    TY+V TL+V    LRS    A+P K           + + DL  ++ N A+A+++             +N+   EVLWTP D +D +DRDEL   +PEL
Sbjct:   51 QPGAALCLQVACYCDDR--QNSLFGKLNKIASSADTDSELGLQSLVSDTCLAILRSSKDWLAAR--TESEIAGLLKND----------VDAAYNRLVVTERSKWEVEQKALKRT-----------------APGQPTYMVATLVVL---LRS----AQPLKPI---------SQNGDLRDALQNLAAAVSV------------DDNLLAAEVLWTPEDTNDVMDRDELFLNFPEL 226          
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Match: A0A835ZEJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.380e-12
Identity = 75/243 (30.86%), Postives = 106/243 (43.62%), Query Frame = 3
Query:  975 KGGNKQEAV-VTSLQLSLYCDRNGGQGDLLATLDKLSQTSDVNSPRGLSALISEVCLALLRSDRDWIGGTGGVKTYLPNVRSNNRGKKPSPASRAKRDFNRATMRERSKWEREAVSNTPDRGFSSSSAPSWGGSNAQKGGTYVVVTLLVAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASAL-TLLEWLGDEAAEGRGENVEDVEVLWTPADHDDSLDRDELDAKWPELRVL 1697
            +GG+    V V  LQ++L       +G +LA L  +++ ++ +S  GLS  +SEVCLAL+R   DWI      + + P             A RA+  FN   + ER+K ERE VS       S S              T  VVT+++A  G      Q E                        +N ASAL  +L  +  +A    GENV  VE+LWTP +  +SLDR  +   +PEL  L
Sbjct:  191 EGGSLGRGVGVVKLQVALNASDRSSRG-ILAQLKSIAERAETSSRGGLSTAVSEVCLALVRRQPDWIASASQYEYFAPRS-----------AERAEAVFNTYAIAERTKVERETVSRFGGEDLSDSRRSDGVRPEDLGKPTQAVVTIVLALKGESLKRFQLE----------------------RSINSASALRNVLTQVAGDATTDDGENVLGVELLWTPEEPWESLDRQAVLEDFPELMDL 399          
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Match: A0A7R9U031_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9U031_9VIRI)

HSP 1 Score: 73.9 bits (180), Expect = 2.900e-10
Identity = 69/241 (28.63%), Postives = 105/241 (43.57%), Query Frame = 3
Query:  978 GGNKQEAVVTSLQLSLYCDRNGGQGDLLATLDKLSQTSDVNSPRGLSALISEVCLALLRSDRDWIGGTGGVKTYLPNVRSNNRGKKPSPASRAKRDFNRATMRERSKWEREAVSNTPDR-GFSSSSAPSWGGSNAQKGGTYVVVTLLVAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASALTLLEWLGDEAAEGRGENVEDVEVLWTPADHDDSLDRDELDAKWPELRVL 1697
            GG+   +   S  L +     G    L   LD ++  +D +SPRGLS +++E CL+LLR+   W   +   K     VRS            A+  FNR ++ ERSK+E E + N   R G + +  P+ G  N      Y+VVT+L +  G  S P                          + V+  +ALT L  +  E        ++ VE+LWTP D +D+L   E+ A +P +  L
Sbjct:  152 GGSTYSSSAKSTVLRVQVGLLGSARSLQRELDMIAARADTSSPRGLSYVLTEACLSLLRNPDYWTYASADSKV----VRS---------IDEAEAGFNRLSLEERSKFEEETLVNVDARKGTAKAPVPASGERNE-----YIVVTILASVGGKVSVPKVQ-----------------------ASVDLRTALTNLAGVPQE-------QLQAVEILWTPQDVNDTLSSAEVVADYPRMSPL 344          
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Match: K9FLC7_9CYAN (Putative membrane protein n=3 Tax=Leptolyngbyaceae TaxID=1890438 RepID=K9FLC7_9CYAN)

HSP 1 Score: 73.6 bits (179), Expect = 2.930e-10
Identity = 67/233 (28.76%), Postives = 105/233 (45.06%), Query Frame = 3
Query: 1002 VTSLQLSLYCDRNGGQGDLLATLDKLSQTSDVNSPRGLSALISEVCLALLRSDRDWI-GGTGGVKTYLPNVRSNNRGKKPSPASRAKRDFNRATMRERSKWEREAVSNTPDRGFSSSSAPSWGGSNAQKGGTYVVVTLLVAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASALTLLEWLGDEAAEGRGENVEDVEVLWTPADHDDSLDRDELDAKWPELRVL 1697
            V  LQ+ L       Q DL    ++L+ +SD +S  GLS ++ E  L+LLR    W    T  V+T L +               A+ +FNR  + ERSK+  EAVSN  ++   S+SA         + G Y++ T++VA  G  + P                + N +QDL    +N+  A+   E +              VEVLWTP    ++L  DE+ A++P L+++
Sbjct:  134 VARLQVGLLAKARHLQDDL----NRLATSSDTSSSAGLSKVLQESTLSLLRHPEYWAYADTETVQTKLTS---------------AEVEFNRLALMERSKFSHEAVSNVNNQISGSNSATLPDADGNLQSGEYIIATVIVAAQGKLTLP----------------NVNSEQDL-HKALNQVGAIPSDELMA-------------VEVLWTPQSSGETLTNDEVIAQYPNLKLV 317          
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Match: A0A7S0QBA5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBA5_9EUKA)

HSP 1 Score: 72.0 bits (175), Expect = 2.940e-10
Identity = 70/233 (30.04%), Postives = 97/233 (41.63%), Query Frame = 3
Query: 1011 LQLSLYC-DRNGGQGDLLATLDKLSQTSDVNSPRGLSALISEVCLALLRSDRDWIGG--TGGVKTYLPNVRSNNRGKKPSPASRAKRDFNRATMRERSKWEREAVSNTPDRGFSSSSAPSWGGSNAQKGGTYVVVTLLVAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASALTLLEWLGDEAAEGRGE-NVEDVEVLWTPADHDDSLDRDELDAKWPELRVL 1697
            LQ++ YC DR   Q  L   L  L++T+D +S  GL  L+S+ CLA LRS +DW+    T   K    N                +  +NR  ++ERSKWE E  S T                 +    TY+V TL+V                          RN  +    + VN      L E +   AA+   E N+   EVLWTP D +D +DRD++   +PEL  L
Sbjct:   62 LQVACYCGDR---QNSLYGKLQSLARTADTSSYEGLQQLVSDTCLATLRSSKDWLAARTTSETKGLFSND--------------VESQYNRIVVKERSKWESEQKSLTR---------------TSAGEATYMVATLVVL------------------------LRNGSELPEVTGVNE-----LREAISQLAADVSIEDNLIAAEVLWTPEDPNDVMDRDDMFLNFPELVTL 233          
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Match: UPI001C01C322 (DUF1517 domain-containing protein n=1 Tax=Leptothoe spongobia TaxID=2651728 RepID=UPI001C01C322)

HSP 1 Score: 73.6 bits (179), Expect = 3.060e-10
Identity = 63/234 (26.92%), Postives = 107/234 (45.73%), Query Frame = 3
Query:  999 VVTSLQLSLYCDRNGGQGDLLATLDKLSQTSDVNSPRGLSALISEVCLALLRSDRDWI-GGTGGVKTYLPNVRSNNRGKKPSPASRAKRDFNRATMRERSKWEREAVSNTPDRGFSSSSAPSWGGSNAQKGGTYVVVTLLVAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASALTLLEWLGDEAAEGRGENVEDVEVLWTPADHDDSLDRDELDAKWPELRVL 1697
             V  LQ+ L       Q DL    ++L+Q++D +S  GL+ ++ E  L+LLR    W    T  + T L +               A+ +FNR T+ ERSK+ RE++SN  ++   ++SA        Q  G Y++ T++VA  G  + P                + N +QD+    +N+  A+   + +              VEVLWTP    ++L  DE+ A++P L+++
Sbjct:  137 AVARLQIGLLAKALHLQKDL----NRLAQSADTSSSAGLTKVLQESTLSLLRHPEYWAYADTDTITTKLTS---------------AEAEFNRLTLMERSKFSRESLSNVNNQLSGNNSAALPNADGIQPSGEYIIATVIVATQGKLTLP----------------NVNSEQDV-HKALNQIGAIPSAQLMA-------------VEVLWTPQASGETLTSDEVIAQYPNLKLV 321          
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Match: UPI00036AC502 (DUF1517 domain-containing protein n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI00036AC502)

HSP 1 Score: 73.6 bits (179), Expect = 3.090e-10
Identity = 69/244 (28.28%), Postives = 112/244 (45.90%), Query Frame = 3
Query:  993 EAVVTSLQLSLYCDRNGGQGDLLATLDKLSQTSDVNSPRGLSALISEVCLALLRSDRDWIGGTGGVKTYLPNVRSNNRGKKPSPASRAKRDFNRATMRERSKWEREAVSNTPDRGFSSSSAPSWGGSNAQKG--------GTYVVVTLLVAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASALT-LLEWLGDEAAEGRGENVEDVEVLWTPADHDDSLDRDELDAKWPELRVL 1697
            +  V+ +Q+ L          L A +D+L+++SD + P GLS L+ EV L L+R D  W+ G    +T   N              RA++  N+ +++ERSK + E +SN   R  +++S P++   ++ +         G Y+VVTLLVA+     T P                          VV+ A +L   L  LG   AE     +  +EVLW+P    D+L   EL  ++P+L++L
Sbjct:  127 DMTVSEIQVGLLSSARS----LQAEIDQLARSSDPSDPAGLSQLLQEVSLLLVRHDDYWVYGNAIAETMKLN--------------RAEQRINQLSLQERSKVDLETLSNVDGRRQAANSQPTFKADSSGETLAEEFSELGEYIVVTLLVAYQSTSGTLP--------------------------VVDSAESLRRCLMQLGAIPAE----RLAAMEVLWSPQAAGDTLTATELLTEYPQLQLL 322          
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Match: A0A7S0H5R7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H5R7_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 3.370e-10
Identity = 73/238 (30.67%), Postives = 108/238 (45.38%), Query Frame = 3
Query:  999 VVTSLQLSLYC-DRNGGQGDLLATLDKLSQTSDVNSPRGLSALISEVCLALLRSDRDWIGGTGGVKTYLPNV--RSNNRGKKPSPASRAKRDFNRATMRERSKWEREAVSN-----TPDRGFSSSSAPSWGGSNAQKGGTYVVVTLLVAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASALTLLEWLGDEAAEGRGENVEDVEVLWTPADHDDSLDRDELDAKWPEL 1688
             V  LQ+++YC DR  G+  L + L+ L + +D  S +GL  L+ E  +ALLRS+ DW+ G    +T+   +  +SN+           +  FN A ++ER+K+E E VS      TPD+       PS           ++VVT+LVA     S P  +                     G   +  A A+T        A     EN+   EVLWTP D  D+L R+E+  K+PEL
Sbjct:  182 TVMLLQVAVYCGDR--GKNSLFSRLNNLGREADTWSEQGLKNLVQESTIALLRSEEDWVAGRS--ETFQKGMFGKSND----------VESAFNAALLQERAKFEEENVSKRSKIQTPDK-------PS-----------HMVVTILVALRDAPSLPTVS---------------------GIEDMRAALAMT-------SARASIEENLLAAEVLWTPEDSSDTLSREEVFLKFPEL 359          
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Match: A0A7S2X718_9EUKA (Hypothetical protein n=3 Tax=Lotharella TaxID=74819 RepID=A0A7S2X718_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 3.480e-10
Identity = 72/231 (31.17%), Postives = 101/231 (43.72%), Query Frame = 3
Query:  999 VVTSLQLSLYC-DRNGGQGDLLATLDKLSQTSDVNSPRGLSALISEVCLALLRSDRDWIGGTGGVKTYLPNVRSNNRGKKPSPASRAKRDFNRATMRERSKWEREAVSNTPDRGFSSSSAPSWGGSNAQKGGTYVVVTLLVAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASALTLLEWLGDEAAEGRGENVEDVEVLWTPADHDDSLDRDELDAKWPEL 1688
             V  LQ+++YC DR  G   L   L+ L+  +D  S  GL  L+ E  LALLRS+ DW+ G    +T+   +       K +    A   FN+A ++ER+K+E E        G +  S              Y++VT++VA   LR  P     R                  G   +  A A+T        A     EN+   EVLWTP D DDSL R+E+  K+PEL
Sbjct:  187 TVMLLQVAVYCGDR--GPNSLYGRLNNLAAGADTWSEEGLRNLVQETTLALLRSEEDWVAGRS--ETFQKGMLG-----KSNDVESA---FNQALLKERAKFEEENTGRLKRVGANKPS--------------YMIVTVMVA---LRDAPNLPTIR------------------GLDEMRSALAMT-------SARASIEENLLAAEVLWTPEDPDDSLTREEVFLKFPEL 363          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig908.16.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKS6_ECTSI6.130e-16275.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0M0K0F2_9EUKA1.040e-1330.21Membrane protein n=1 Tax=Chrysochromulina tobinii ... [more]
A0A835ZEJ7_9STRA3.380e-1230.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9U031_9VIRI2.900e-1028.63Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
K9FLC7_9CYAN2.930e-1028.76Putative membrane protein n=3 Tax=Leptolyngbyaceae... [more]
A0A7S0QBA5_9EUKA2.940e-1030.04Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
UPI001C01C3223.060e-1026.92DUF1517 domain-containing protein n=1 Tax=Leptotho... [more]
UPI00036AC5023.090e-1028.28DUF1517 domain-containing protein n=1 Tax=Synechoc... [more]
A0A7S0H5R7_9EUKA3.370e-1030.67Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A7S2X718_9EUKA3.480e-1031.17Hypothetical protein n=3 Tax=Lotharella TaxID=7481... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig908contigP-littoralis_Contig908:37549..41928 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LDM2
PFAMsDUF1517
Model size2824
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.36e-14
EggNOG OGsCOG4371@1|root,2QUI9@2759|Eukaryota
Ec32 ortholog descriptionProtein of unknown function DUF1517
Ec32 orthologEc-21_001970.1
DescriptionProtein of unknown function (DUF1517)
Cds size1635
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig908.16.2prot_P-littoralis_Contig908.16.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig908 38673..41863 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791813.6612368-UTR-P-littoralis_Contig908:37548..386721680791813.6612368-UTR-P-littoralis_Contig908:37548..38672Pylaiella littoralis U1_48UTRP-littoralis_Contig908 37549..38672 -
1680791813.7329652-UTR-P-littoralis_Contig908:41863..419281680791813.7329652-UTR-P-littoralis_Contig908:41863..41928Pylaiella littoralis U1_48UTRP-littoralis_Contig908 41864..41928 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791813.6768653-CDS-P-littoralis_Contig908:38672..388351680791813.6768653-CDS-P-littoralis_Contig908:38672..38835Pylaiella littoralis U1_48CDSP-littoralis_Contig908 38673..38835 -
1680791813.6884747-CDS-P-littoralis_Contig908:39468..397961680791813.6884747-CDS-P-littoralis_Contig908:39468..39796Pylaiella littoralis U1_48CDSP-littoralis_Contig908 39469..39796 -
1680791813.7085261-CDS-P-littoralis_Contig908:40131..402071680791813.7085261-CDS-P-littoralis_Contig908:40131..40207Pylaiella littoralis U1_48CDSP-littoralis_Contig908 40132..40207 -
1680791813.7234855-CDS-P-littoralis_Contig908:40795..418631680791813.7234855-CDS-P-littoralis_Contig908:40795..41863Pylaiella littoralis U1_48CDSP-littoralis_Contig908 40796..41863 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig908.16.2

>prot_P-littoralis_Contig908.16.2 ID=prot_P-littoralis_Contig908.16.2|Name=mRNA_P-littoralis_Contig908.16.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=545bp
MDFLCYNISMVPTWREVIATFFPVVTATLFRPPQAARTAGFLAPVPGVEL
TTFFNIRSTRNLLPQSAARPRSSEGSRAYKTCMNTGLYSADVDEGGAIAT
TVEPDGNTKYISDANSNRHTGGASDSPCDRREVQLSDKSCSSGGNGQWQG
RRLFTLPPLILAATTACPQASSAAVTGGRIGGGYTPPPERAPSAPPMEQQ
QRYQAPQQQEQQYQPRAGRDIYGSEGSRFHIKFDSAQGPRRSTRRFDPDA
GSVPSSTITPGDVVMVGGVSAGIAAVQRYNRKRFLEENGQDDSSPTLPAR
AGRKGGNKQEAVVTSLQLSLYCDRNGGQGDLLATLDKLSQTSDVNSPRGL
SALISEVCLALLRSDRDWIGGTGGVKTYLPNVRSNNRGKKPSPASRAKRD
FNRATMRERSKWEREAVSNTPDRGFSSSSAPSWGGSNAQKGGTYVVVTLL
VAWSGLRSTPPQAEPRKGAWFWQDGGSRNDDQDLGFSVVNRASALTLLEW
LGDEAAEGRGENVEDVEVLWTPADHDDSLDRDELDAKWPELRVL*
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mRNA from alignment at P-littoralis_Contig908:37549..41928-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig908.16.2 ID=mRNA_P-littoralis_Contig908.16.2|Name=mRNA_P-littoralis_Contig908.16.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4380bp|location=Sequence derived from alignment at P-littoralis_Contig908:37549..41928- (Pylaiella littoralis U1_48)
CGTCGTTGTTCTTGGTCTACGTGCTCGCCTACTCTGTCTCTCTGCCTTCT ATCTGTGGGCGTCTTATGGACTTTCTGTGTTACAATATTTCGATGGTACC GACCTGGAGGGAGGTCATTGCCACCTTTTTCCCTGTCGTGACTGCGACAC TATTTCGCCCACCACAAGCAGCACGTACAGCAGGTTTTCTTGCTCCTGTT CCAGGTGTCGAACTCACGACATTCTTCAACATCAGAAGTACCAGGAATCT GCTGCCACAGAGCGCCGCCCGACCGCGTTCGTCGGAAGGCAGTAGAGCGT ACAAAACCTGCATGAATACTGGCCTATACTCCGCGGATGTAGATGAGGGT GGAGCCATCGCTACTACTGTGGAACCGGACGGCAATACGAAATATATTTC AGATGCAAATTCAAACCGACATACCGGCGGCGCTTCTGATTCGCCTTGTG ATCGCAGAGAGGTTCAACTATCGGACAAGAGCTGTAGCAGCGGTGGGAAT GGGCAGTGGCAAGGGAGGCGGCTGTTCACTCTCCCGCCATTAATTCTCGC TGCCACTACGGCGTGCCCGCAAGCATCATCAGCTGCGGTGACAGGAGGTA GGATAGGCGGCGGCTACACCCCCCCGCCAGAACGCGCCCCAAGCGCACCA CCCATGGAGCAGCAGCAGCGTTACCAAGCCCCGCAGCAGCAAGAGCAGCA GTACCAGCCCAGAGCTGGCAGAGATATTTACGGCTCCGAGGGAAGCCGGT TTCATATTAAGTTCGATAGTGCACAAGGGCCGAGGCGATCTACCCGTCGC TTCGACCCGGATGCCGGTTCTGTGCCATCCAGCACCATTACTCCGGGAGA CGTCGTTATGGTAGGCGGAGTTAGTGCCGGCATTGCGGCCGTTCAGCGCT ACAACAGAAAACGCTTTCTGGAAGAAAACGGCCAAGACGACTCCTCCCCT ACACTGCCAGCGCGGGCCGGCCGCAAGGGTGGCAATAAGCAGGAGGCCGT GGTGACATCATTGCAGTTATCGTTATATTGCGACCGAAATGGAGGGCAAG GAGACCTTTTGGCCACGCTGGACAAGCTCTCGCAGACATCGGATGTCAAC AGTCCACGAGGTTTATCTGCACTCATCAGCGAGGTGACAGATCAAGGGAT ACGCTGGCCCCGAGGGATCAGTTTTGTCCTCAGGTGTAGGTCTGTTCGCC TAGACGTTGACCTGGTGTTGTTGTAGCGTAGCCGGATGCACTTTCTGTTC CCCAGTTTAACATATTTCGACGAATTTTTCTCACAGTAATTATTGGGAGT GAAGAACGACTATGTCGCGAGTACACAGAGGGTCATGGACGGTTGAACGC TCAGAGAAAAAAAACGAAAAACAAAAGGAAAAGCACCGCAGAAGGTGGGT GGAGAAAGAAAAAGATCATGTGTGACCTTCCTTCTAGGTAACCCCGGCTG GTGTTCATACCGAAAGGTGTGTAGATTATTGCCCAGAGTAAAAGGGATAA AACACACATACAAACACTCACACACACTGCCGCGAACGTGTCACTGATGA TGTTTCCTGCACTCGGTTCAATCAACACACGAAACGATGAAGCAATGCCC TTGTTTGAGCACGGTGCGCATATTGGTCTTGGCGTTCCTCGTTTCGTTGT TTGTGTTGTTGTCGTCGGCATTCCGTGTCATTATTGCTGTACGCGCAACG AATCTACGGCAATCGGCACAGGTGTGCCTGGCGCTGCTGCGGTCAGACAG AGACTGGATAGGAGGCACCGGAGGCGTTAAAACATATCTCCCGAATGGTC AGTGGTTCTCGCCCTCGGGTAAAGTTTTTGTCATTTCGTTTTCATGCATT ACGTGGCTTCCGGGAGTACGTAGAACGAGGCCTGATTCGAGTAGGTCGCA AACGTCTGAACGAGCATGTCCAGTACTGGACTCTTGCTGTAGTGGTGAAA TTCCTGGTGGTTCATGGCGCATGTTTTTTTGTACTTCCAAGTATATATTT TTCAAAATTGGTGCGTCACAATTGCGCCGTGTTGTCTGCGACATGGCCGC CTTTCTGTGTGCAGCTGCCAGTAGGAGTTCAGCTCGAATTCCCCTCTAAC GGCCCATCATTCCACCGCCCTTCCCGCTTCAGTCCGTTCAAACAACCGGG GCAAAAAACCCAGCCCCGCATCCAGGGCAAAGCGTGACTTCAACCGAGCC ACCATGCGCGAACGATCAAAGTGGGAACGGGAGGCTGTGTCTAACACCCC GGACAGAGGGTTCAGCAGTAGTTCGGCACCATCATGGGGGGGCTCAAACG CCCAAAAGGGCGGCACATACGTGGTGGTGACCTTGCTGGTGGCCTGGTCC GGTTTGAGGAGCACCCCTCCCCAGGCAGAACCTCGAAAAGGCGCTTGGTT CTGGCAGGACGGTGGTAGTCGGAATGATGATCAAGACTTGGGATTTTCCG TCGTCAACAGGTGAGAGGACTAGCTCTTTACTTTTGGTTATATGCCGGTG CTCCTGTAACTCGTGCTTGGGTCTGGCTATGTCTTCGGGTCACTTGACTC GGTGTCGATTGAAAGAATCGGATGTCACATTGGGGGTTCCATGATGAAAC AGTACAACCACGCGATGTCACCCGACCGCTTGGTCATTCCATATTCGAGT GTTGGGCTATCGACATGAATCGTGCGAAAGAAGGCTCTTACTGTTGTTGT TGTCTTTACCGTGGTGCTTTTTTGCGGGTGTGCATGGCCGAGTGGAAATG GAGGGCGTATTTGCTGGTGTAGGTAACGACCACGCGCCACTTGTCGAGCC ACCACGCCTCTGTTTGAAAGTGCGCGCGTTCGGTGTTATTTGACCCACTT CAAAGAAACATGTGCAATATCCACCTCGTCCCGTATGTTGTTCGCACCAC AGACGATCTTCGGCCAAACTTTCGAATGCTTGCCCCTGTTTTGTCACGGG TCGTTGTTTGAATTTCCCACCGTTCGCCCGTTCACAGATTGAACACTCGT ATGCGCGTTGTGTACGTATGTCGGAACCCTTGCAAGGAGAGTAATGCATC ACCCCGTATGCTTTGTTCCGCAACATCGCAATCCATCAAGCAGAGCGTCG GCTTTGACCCTGCTAGAATGGCTTGGAGATGAGGCCGCTGAGGGGCGAGG AGAAAATGTGGAGGATGTAGAGGTGCTGTGGACCCCCGCAGACCACGATG ATTCGCTCGACCGAGACGAGTTAGACGCCAAATGGCCTGAGCTTAGAGTA CTTTGATGAGTGCGAGGGGGTCGGGAGGGAAATTTGGTAAGGTGTGGCTC TTGTACGTGGAAGAGGAAGAGGGGCAAATCCTAGAGTTGTGAGAGGAAGA GTTGGGATGCATGGGCACATCACGTTACAAAGTATGTACACCCGTTTCAA GGGCGAGGGCGTATGGTGAACGGTATCAGGTATCTCAGCCGCTTTGATCG ATGACGGAGTTTTCCCAGATATCATACTTGTAGAAGGAAAGAAAATGACA ATCAATAGCACAGAGACTTGAAATCGTAAATTATCCTGTATATTGGTATC GTTATCTCGCCACCTGCGCATTAATTGGTGAATGAAGATTGCCCAGCTTG CAGGTTTTGATACCCAATGCCTGGGTTGAAGCCCCTTTTGGTTCCATTAC AGAACGCGTGTTGGCTCATTTACATATCTAACCTCCTGCTTTTGCGACAC CACGTGGCTGTCGTCCATTGAAAATCTACACGACTGCATGCGACATAAAT GACGGTAGCACTCTCACACTCATGGCTGAGATTAGTATTGTTGTTGGCGT CGTTTTTTATGAGAATCCGCAGTAGCTCTGTTTTGCAATCGCATGTATGT TTGGCTTTGTCGTATGCATGATACAGAGCATTTTAGATGCACAACAGAAA CCAGAGAGCTGTATTTTATCGGATGACATGTTGGTAAGTTGCTTGACTCA GAGCGGGAAAATGCTCCAACCGGTTTCTTTCTCGCAATGGTACCCGAGGG TATCCTATTCCGTGAAAGGTTTACTTTGTTTTATCGTATTCCATAACATG AGGCTCAAAAAGGCAAATCTCCTGAAGAGGGACAAGTCTTCCAGTCGCTG TCAACTTCGCTCTCAAAAGGCACTTGTGCCCACGCTCATGGTAGAGCCGA TGTATGAAATCCGAGACTTTTACATGAGGAATTTATTATAGTCCCAACAG AGAGAGAGGAAGGTGGCCAGCAATTAACTGATTGGCCAGTTTTTTCGAAC GGAACTTTCTGAATGGTTGAAAAAGTTGATGTCTTTGTTCCGTTTTTCCG TTTGGCCGAACCTTTTGGAAGGAGATTTTTTTTTATTGGCCAAAAATCCC TGGTCGACCGGTGACGTCATCCACGGCGGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig908:37549..41928-

>mRNA_P-littoralis_Contig908.16.2 ID=mRNA_P-littoralis_Contig908.16.2|Name=mRNA_P-littoralis_Contig908.16.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1635bp|location=Sequence derived from alignment at P-littoralis_Contig908:37549..41928- (Pylaiella littoralis U1_48)
ATGGACTTTCTGTGTTACAATATTTCGATGGTACCGACCTGGAGGGAGGT
CATTGCCACCTTTTTCCCTGTCGTGACTGCGACACTATTTCGCCCACCAC
AAGCAGCACGTACAGCAGGTTTTCTTGCTCCTGTTCCAGGTGTCGAACTC
ACGACATTCTTCAACATCAGAAGTACCAGGAATCTGCTGCCACAGAGCGC
CGCCCGACCGCGTTCGTCGGAAGGCAGTAGAGCGTACAAAACCTGCATGA
ATACTGGCCTATACTCCGCGGATGTAGATGAGGGTGGAGCCATCGCTACT
ACTGTGGAACCGGACGGCAATACGAAATATATTTCAGATGCAAATTCAAA
CCGACATACCGGCGGCGCTTCTGATTCGCCTTGTGATCGCAGAGAGGTTC
AACTATCGGACAAGAGCTGTAGCAGCGGTGGGAATGGGCAGTGGCAAGGG
AGGCGGCTGTTCACTCTCCCGCCATTAATTCTCGCTGCCACTACGGCGTG
CCCGCAAGCATCATCAGCTGCGGTGACAGGAGGTAGGATAGGCGGCGGCT
ACACCCCCCCGCCAGAACGCGCCCCAAGCGCACCACCCATGGAGCAGCAG
CAGCGTTACCAAGCCCCGCAGCAGCAAGAGCAGCAGTACCAGCCCAGAGC
TGGCAGAGATATTTACGGCTCCGAGGGAAGCCGGTTTCATATTAAGTTCG
ATAGTGCACAAGGGCCGAGGCGATCTACCCGTCGCTTCGACCCGGATGCC
GGTTCTGTGCCATCCAGCACCATTACTCCGGGAGACGTCGTTATGGTAGG
CGGAGTTAGTGCCGGCATTGCGGCCGTTCAGCGCTACAACAGAAAACGCT
TTCTGGAAGAAAACGGCCAAGACGACTCCTCCCCTACACTGCCAGCGCGG
GCCGGCCGCAAGGGTGGCAATAAGCAGGAGGCCGTGGTGACATCATTGCA
GTTATCGTTATATTGCGACCGAAATGGAGGGCAAGGAGACCTTTTGGCCA
CGCTGGACAAGCTCTCGCAGACATCGGATGTCAACAGTCCACGAGGTTTA
TCTGCACTCATCAGCGAGGTGTGCCTGGCGCTGCTGCGGTCAGACAGAGA
CTGGATAGGAGGCACCGGAGGCGTTAAAACATATCTCCCGAATGTCCGTT
CAAACAACCGGGGCAAAAAACCCAGCCCCGCATCCAGGGCAAAGCGTGAC
TTCAACCGAGCCACCATGCGCGAACGATCAAAGTGGGAACGGGAGGCTGT
GTCTAACACCCCGGACAGAGGGTTCAGCAGTAGTTCGGCACCATCATGGG
GGGGCTCAAACGCCCAAAAGGGCGGCACATACGTGGTGGTGACCTTGCTG
GTGGCCTGGTCCGGTTTGAGGAGCACCCCTCCCCAGGCAGAACCTCGAAA
AGGCGCTTGGTTCTGGCAGGACGGTGGTAGTCGGAATGATGATCAAGACT
TGGGATTTTCCGTCGTCAACAGAGCGTCGGCTTTGACCCTGCTAGAATGG
CTTGGAGATGAGGCCGCTGAGGGGCGAGGAGAAAATGTGGAGGATGTAGA
GGTGCTGTGGACCCCCGCAGACCACGATGATTCGCTCGACCGAGACGAGT
TAGACGCCAAATGGCCTGAGCTTAGAGTACTTTGA
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