mRNA_P-littoralis_Contig902.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Match: D8LSW5_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW5_ECTSI) HSP 1 Score: 217 bits (553), Expect = 6.110e-68 Identity = 109/121 (90.08%), Postives = 115/121 (95.04%), Query Frame = 1
Query: 1 SDVAMWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDLHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVIVLSEGRIVEAGHPHLLL 363
SD MWA+LEAVQMK YVQ+L GGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANID HTDSLIQDVVRTSFKGKTVIMVAHRLNT+IDCDQV+VLSEG +VEAGHPH+LL
Sbjct: 186 SDAQMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLL 306
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI) HSP 1 Score: 217 bits (553), Expect = 3.590e-63 Identity = 109/121 (90.08%), Postives = 115/121 (95.04%), Query Frame = 1
Query: 1 SDVAMWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDLHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVIVLSEGRIVEAGHPHLLL 363
SD MWA+LEAVQMK YVQ+L GGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANID HTDSLIQDVVRTSFKGKTVIMVAHRLNT+IDCDQV+VLSEG +VEAGHPH+LL
Sbjct: 1282 SDAQMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLL 1402
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI) HSP 1 Score: 217 bits (552), Expect = 4.880e-63 Identity = 109/121 (90.08%), Postives = 115/121 (95.04%), Query Frame = 1
Query: 1 SDVAMWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDLHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVIVLSEGRIVEAGHPHLLL 363
SD MWA+LEAVQMK YVQ+L GGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANID HTDSLIQDVVRTSFKGKTVIMVAHRLNT+IDCDQV+VLSEG +VEAGHPH+LL
Sbjct: 1251 SDAHMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLL 1371
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE) HSP 1 Score: 217 bits (552), Expect = 4.900e-63 Identity = 109/121 (90.08%), Postives = 115/121 (95.04%), Query Frame = 1
Query: 1 SDVAMWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDLHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVIVLSEGRIVEAGHPHLLL 363
SD MWA+LEAVQMK YVQ+L GGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANID HTDSLIQDVVRTSFKGKTVIMVAHRLNT+IDCDQV+VLSEG +VEAGHPH+LL
Sbjct: 1302 SDAHMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLL 1422
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE) HSP 1 Score: 188 bits (478), Expect = 4.530e-53 Identity = 96/103 (93.20%), Postives = 99/103 (96.12%), Query Frame = 1
Query: 1 SDVAMWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDLHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQV 309
SD MWA+LEAVQMK YVQ+LPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQR+QILVMDEATANID HTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQV
Sbjct: 1201 SDAHMWASLEAVQMKTYVQSLPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRTQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQV 1303
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Match: A0A835YMC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC7_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.710e-49 Identity = 89/121 (73.55%), Postives = 101/121 (83.47%), Query Frame = 1
Query: 1 SDVAMWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDLHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVIVLSEGRIVEAGHPHLLL 363
SD MWAALE+VQMK YV LPGGL AP++E G NLSVGQRQLLCLARA+LQRS++L+MDEATANID TDSLIQ VRT F G TVI VAHRL TIIDCD+V+VLS G+++E GHPH LL
Sbjct: 1632 SDDMMWAALESVQMKAYVSGLPGGLSAPISESGSNLSVGQRQLLCLARAILQRSKLLLMDEATANIDTGTDSLIQAAVRTQFSGCTVITVAHRLRTIIDCDRVLVLSHGQVLEEGHPHELL 1752
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Match: A0A6P8IAW5_ACTTE (multidrug resistance-associated protein 4-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IAW5_ACTTE) HSP 1 Score: 154 bits (390), Expect = 1.990e-44 Identity = 74/121 (61.16%), Postives = 97/121 (80.17%), Query Frame = 1
Query: 1 SDVAMWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDLHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVIVLSEGRIVEAGHPHLLL 363
+DV +W ALE VQ+K+ ++ LP GL+ P+AE G N SVGQRQL+CLARA+L ++ILV+DEATAN+D +TDSLIQ+ +R FK TV+ +AHRLNTI+D D+V+VL EGR+VE PHLLL
Sbjct: 56 ADVDLWNALEEVQLKESIEELPEGLETPLAESGSNFSVGQRQLICLARAILSHNKILVIDEATANVDHNTDSLIQETIRNKFKDCTVLTIAHRLNTIMDSDRVMVLDEGRLVEFDEPHLLL 176
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Match: A0A7S3Y5Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5Z6_HETAK) HSP 1 Score: 157 bits (396), Expect = 3.690e-44 Identity = 79/120 (65.83%), Postives = 96/120 (80.00%), Query Frame = 1
Query: 4 DVAMWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDLHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVIVLSEGRIVEAGHPHLLL 363
D W+AL AV++ V+A GGL A VAEGGGN SVGQRQLLCL RA+L R ++LV+DEATAN+DL TD LIQD VRT F+G TVIM+AHRL+T+IDCDQ++VL +GR+VE G PH LL
Sbjct: 209 DGEFWSALAAVRLDGAVKA-QGGLGASVAEGGGNWSVGQRQLLCLGRALLARHRVLVLDEATANVDLETDGLIQDAVRTKFQGCTVIMIAHRLHTVIDCDQILVLGDGRVVEQGAPHTLL 327
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Match: A0A7R9QGY5_9ACAR (Hypothetical protein (Fragment) n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9QGY5_9ACAR) HSP 1 Score: 149 bits (375), Expect = 5.420e-43 Identity = 73/121 (60.33%), Postives = 95/121 (78.51%), Query Frame = 1
Query: 1 SDVAMWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDLHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVIVLSEGRIVEAGHPHLLL 363
SD MWAALE VQ++ V LPG LDA ++EGGGN SVGQRQL+CLARA+L+ +++LV+DEATAN+D TD+LIQ +RT F TV+ +AHRLNTIIDC++V+VL G+++E PH LL
Sbjct: 51 SDPEMWAALEEVQLRAVVDELPGRLDAELSEGGGNFSVGQRQLVCLARAILRHNRVLVLDEATANVDHQTDALIQTSIRTHFHDCTVLTIAHRLNTIIDCNRVMVLDAGQLLEFDAPHSLL 171
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Match: A0A1B6LUH8_9HEMI (ABC transporter domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6LUH8_9HEMI) HSP 1 Score: 147 bits (371), Expect = 3.540e-42 Identity = 68/121 (56.20%), Postives = 97/121 (80.17%), Query Frame = 1
Query: 1 SDVAMWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDLHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVIVLSEGRIVEAGHPHLLL 363
SD +W+ALE V++K+ ++ LP GL++ V EGG NLSVGQRQL+CLARA+++ ++ILV+DEATAN+DL TD+LIQ +R F TV+ +AHRLNT++D D+++V+S G +VE HPH+LL
Sbjct: 68 SDHTIWSALEEVELKEVIEDLPQGLNSKVVEGGSNLSVGQRQLMCLARAIVRNNKILVLDEATANVDLQTDALIQKTIRHRFADCTVLTIAHRLNTVMDSDKILVMSNGCLVEFDHPHVLL 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig902.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig902.4.1 >prot_P-littoralis_Contig902.4.1 ID=prot_P-littoralis_Contig902.4.1|Name=mRNA_P-littoralis_Contig902.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=117bp MWAALEAVQMKDYVQALPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSback to top mRNA from alignment at P-littoralis_Contig902:18316..19606- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig902.4.1 ID=mRNA_P-littoralis_Contig902.4.1|Name=mRNA_P-littoralis_Contig902.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1291bp|location=Sequence derived from alignment at P-littoralis_Contig902:18316..19606- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig902:18316..19606- >mRNA_P-littoralis_Contig902.4.1 ID=mRNA_P-littoralis_Contig902.4.1|Name=mRNA_P-littoralis_Contig902.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=351bp|location=Sequence derived from alignment at P-littoralis_Contig902:18316..19606- (Pylaiella littoralis U1_48)back to top |