prot_P-littoralis_Contig90.130.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig90.130.1
Unique Nameprot_P-littoralis_Contig90.130.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length152
Homology
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BLAST of mRNA_P-littoralis_Contig90.130.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.440e-7
Identity = 73/150 (48.67%), Postives = 81/150 (54.00%), Query Frame = 0 
Query:    4 SNNSKTVTRRSFTPPVS-PAFSDGGRSGSRERMLTAETAANEPPIFVTVAQFCTLGVAEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTPAILPSLFPQASNNISVGCAAVVSEGVRMVLTSVDHEGGAVAT 152
            S  S  +TR S TPP   P FS  G + S E + TA  A +EPP+F TVAQFCTLGVAEE                  XXXXXXXXXXXXXXXXXXX           A+LP LFP      S      VSEGV+MVL+S   EG   AT
Sbjct:  399 SGGSGALTRGSSTPPSPRPGFSGAGGATS-EDLDTAGAAVSEPPLFATVAQFCTLGVAEESGAAQAAATGETDAAGAPXXXXXXXXXXXXXXXXXXX-----------AMLPLLFPXXXXXXSA-----VSEGVKMVLSSAGREGEGGAT 531
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BLAST of mRNA_P-littoralis_Contig90.130.1 vs. uniprot
Match: D8LHH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH6_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 7.200e-6
Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 0 
Query:    4 SNNSKTVTRRSFTPPVSPAFSDGGRSGSRERMLTAETAANEPPIFVTVAQFCTLGVAEE 62
            S  S  + RR  TPP + +      + + E +  A+ AA+EPP+F TVAQFCTLGVAEE
Sbjct: 2114 SGGSGALARRCSTPPSARSGFSAAGAATSEDLNAADAAASEPPLFATVAQFCTLGVAEE 2172
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig90.130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWQ8_9PHAE2.440e-748.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHH6_ECTSI7.200e-647.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig90contigP-littoralis_Contig90:483147..483602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig90.130.1mRNA_P-littoralis_Contig90.130.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig90 483145..483602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig90.130.1 ID=prot_P-littoralis_Contig90.130.1|Name=mRNA_P-littoralis_Contig90.130.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=152bp
NSNSNNSKTVTRRSFTPPVSPAFSDGGRSGSRERMLTAETAANEPPIFVT
VAQFCTLGVAEEGGALLAASAGAAAAKSAVTDVSGGDDAQGAGGQQEEVI
AVGGGGAVTPAILPSLFPQASNNISVGCAAVVSEGVRMVLTSVDHEGGAV
AT
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