prot_P-littoralis_Contig121.82.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig121.82.1
Unique Nameprot_P-littoralis_Contig121.82.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length468
Homology
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BLAST of mRNA_P-littoralis_Contig121.82.1 vs. uniprot
Match: A0A6H5JZN2_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZN2_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 3.010e-12
Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 0 
Query:   82 KAGRELLNGKDWYLQEAYRAENQ----------------------------YTKFLAKWMRGLLGDFSTLSEMGDTMDKFFASAPGFVKKEEAKALRSREEA 155
            +AG+ LL+G +WY QEAYRA+NQ                            + KFLAKWMR L GD+ +   + DT+D+FFASAPGFV++E+ +A+  R++A
Sbjct: 1348 EAGKALLSGSNWYAQEAYRAQNQALGRCIRHVYDYGVICLIDERIRAGEWKHVKFLAKWMRDLRGDYPSFEHVVDTIDQFFASAPGFVREEKERAVVLRQQA 1449
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig121.82.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZN2_9PHAE3.010e-1241.18Helicase ATP-binding domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableCOILSCoilCoilcoord: 17..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..408
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..48
IPR020467Potassium channel, voltage dependent, Kv1.4PRINTSPR01511KV14CHANNELcoord: 153..167
score: 33.33
coord: 181..190
score: 55.71
coord: 168..178
score: 70.13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig121contigP-littoralis_Contig121:344590..347517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig121.82.1mRNA_P-littoralis_Contig121.82.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig121 344573..347947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig121.82.1 ID=prot_P-littoralis_Contig121.82.1|Name=mRNA_P-littoralis_Contig121.82.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=468bp
MKGGGGGRGVGGVGGAAAALRRLMQQRRQQHQQHQQQRGMAAIGPVGTPK
EAEAKVAATLKEAAAAAAAEEAEAAKAKAAAKAGRELLNGKDWYLQEAYR
AENQYTKFLAKWMRGLLGDFSTLSEMGDTMDKFFASAPGFVKKEEAKALR
SREEAGARRRARAEERAAAAAAALAATSAALEGAPASGGGGGSGGVENAR
AEGTRVASSSGGGEIEAGDNRSSTIGGSGGGPDDVRFCVSEVDDARGQEQ
NHQQHPSIVTPLPSSEVHPTFASTPAAGSSSPSVDVVLPSPSPPLPVETP
PLRAGSQCPRLAAIASSTARDCVIGVGIGDGSWPSSAGGAGGRASAQEQQ
RLPPEAALRDRHGRSCGVGGVDIVESGFGSGVGVGGLGGSRGSGSGHCTP
TSNGSRSGRREVAGLAEGTPVDDDDDDEGEQDEQVDGEFIDLTASDVVLA
QDQRQEAAISLLYDVGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020467K_chnl_volt-dep_Kv1.4