mRNA_P-littoralis_Contig886.19.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Match: D7G330_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G330_ECTSI) HSP 1 Score: 571 bits (1472), Expect = 2.590e-201 Identity = 303/416 (72.84%), Postives = 336/416 (80.77%), Query Frame = 1
Query: 1 MATNAIEVTTNILKIGEDMPVVGGLCTAVLNAKDMVDKASDNQVKLGKLCDRCCGITVQVIEKLQGTTSLTINVSPLENCFNELEGVAERYGKKGCCTRLAEFRKDDEDIRDLDKRISTAIADLTAAVVVEFGNLVQQRFGEILARLQPRPKLAPEPPGVPKGQAWHAVRGGVEDSVCDILGVDGGPVVAVLIGRSGAGKTTAAAAMVGNRQGSIRPRAGETEDQARTRLLRLRARFSDGVVWLRVGEGSGDADHLPRLMLELAEGVGKVI--EGVRAPEMGEAGESYVKKIVELKKKQCL*VADDVWEAEVVKKLRETGMWVLLTTRSSELVEPCEQVFVDRLGETEAENVLRGVANLSPDGRLCDDAMKVL*ICGGVAMDIAFVGSWSSMRTPDNCAPKSSRAWTRSVEEIEAQ 1242
MAT IEVTT+ILKIGED+P VGGLCTAVLNAKDMVDKASDNQ KL KLC+RCCGITVQV+EKL+G T L +NVSPLE+C ELE VAERYGKK CCTRL F+KDDEDIRDL+KRISTAI DLTAA VVE GNL+QQ+ GEILARLQPRPKLAP PPGVP GQ+WH +R GV D V DILG DGGP VA L GRSGAGKTTAAAAMVG RQG I P A E E+QA TRL RLRARFSDGVVWLRVG+G+G AD LP LM +LA+ + + + V P +GE GESYVKKIVE + +C VADDVWE VV+KLRETGMW+LLT R+ +VEP E+VFVDRL + EA+NVLRG A L P LCD AMKVL +CG VAMDIAFVGSWSS+RT DNCAPKSSRAW V EI AQ
Sbjct: 12 MATEVIEVTTSILKIGEDIPFVGGLCTAVLNAKDMVDKASDNQAKLEKLCERCCGITVQVVEKLKGPTPLMVNVSPLEDCVKELEEVAERYGKKSCCTRLTHFQKDDEDIRDLEKRISTAIDDLTAAGVVEVGNLMQQQVGEILARLQPRPKLAPVPPGVPMGQSWHTMRDGVVDRVYDILGGDGGPAVAALGGRSGAGKTTAAAAMVGERQGPIHPLARENEEQAGTRLDRLRARFSDGVVWLRVGKGAGVADRLPLLMRKLAKALHEEVLKSYVDGPGIGEDGESYVKKIVEQESLKCRVVADDVWEPPVVEKLRETGMWILLTARNPSMVEPNERVFVDRLEKMEAQNVLRGAARLPPGQSLCDVAMKVLEVCGYVAMDIAFVGSWSSVRTVDNCAPKSSRAWAGVVAEITAQ 427
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 384 bits (986), Expect = 3.260e-120 Identity = 232/419 (55.37%), Postives = 289/419 (68.97%), Query Frame = 1
Query: 1 MATNAIEVTTNILKIGEDMPVVGGLCTAVLNAKDMVDKASDNQVKLGKLCDRCCGITVQVIEKLQGTTSLTINVSPLENCFNELEGVAERYGKKGCCTRLAEFRKDDEDIRDLDKRISTAIADLTAAVVVEFGNLVQQRFGEILARLQPRP--KLAPEPPGVPKGQAWHAVRGGVEDSVCDILGVDGGPVVAVLIGRSGAGKTTAAAAMVGNRQGSIRPRAGETEDQARTRLLRL---RARFSDGVVWLRVGEGSGDADHLPRLMLELAEGVGKVI--EGVRAPEMGEAGESYVKKIVELKKKQCL*VADDVWEAEVVKKLRETGMWVLLTTRSSELVEPCEQVFVDRLGETEAENVLRGVANLSPDGRLCDDAMKVL*-ICGGVAMDIAFVGSWSSMRTPDNCAPKSSRAWTRSVEEI 1233
++T V T I++IG PVV LC A+L AK +VD AS N+ +LG+LC+RC ITVQVI+K + + + TI+VSPL+ C ++L+ VA+RY +GC RLA+FR+D +DI+ L RI + + A VV + ++ +ILARLQPRP KLAP PPG+P G+AWHAVR VED V IL D P VA L G+SGAGK+TAAA MV NR+ IR ETEDQARTR+ RL RARFSDGVV+LRVG+G G AD LP LM +LA+ + + + + APE GE GESYVKK++ KK+CL VADDVWE VV KL+ETGMWVLLTTR E+VEP E V VD+L EAE+VLRG A L RLCD AM+VL ICG VAMDIAFVGSWS +R D+ S AW +V +I
Sbjct: 97 ISTVVESVATGIIEIGAATPVVAPLCVALLKAKGIVDGASRNKEELGELCERCDLITVQVIDKAKASNTSTIDVSPLQGCVDKLDEVAKRYHDQGCLARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMDRLED-VRQILARLQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYKILSGDE-PAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEKGESYVKKMMTRTKKRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEPNEGVDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDD-----SGAWAEAVSKI 508
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 357 bits (915), Expect = 3.230e-107 Identity = 213/403 (52.85%), Postives = 270/403 (67.00%), Query Frame = 1
Query: 37 LKIGEDMPVVGGLCTAVLNAKDMVDKASDNQVKLGKLCDRCCGITVQVIEKLQGTTSLTINVSPLENCFNELEGVAERYGKKGCCTRLAEFRKDDEDIRDLDKRISTAIADLTAAVVVEFGNLVQQRFGEILARLQPRPKLAPEPPGVPKGQAWHAVRGGVEDSVCDILGVDGGPVVAVLIGRSGAGKTTAAAAMVGNRQGSIRPRAGETEDQARTRLLRLRARFSDGVVWLRVGEGSGDADHLPRLMLELAEGVGK-VIEGVRAPEMGEAGESYVKKIVELKKKQCL*VADDVWEAEVVKKLRETGMWVLLTTRSSELVEPCEQVFVDRLGETEAENVLRGVANLSPDGRLCDDAMKVL*ICGGVAMDIAFVGSWSSMRTPDNCAPKSSRAWTRSVEEIEAQ 1242
++IG PVV LCTA+L AK +VD AS N+ +L +L +RC IT+QVI+K + + + TI+V PL+ C ++L+ VAERY +G RLA+FR+D EDI+ L KRI + + + VV G ++ +ILARLQP PKLAP P P +++H VR GV D VC ILG DGGP +A L G SGAGKTT+AAAMVG R G+ R+RA F DGVVWL VG +G AD LP LM LA+ + + V++G G+ G SYV+KIV +K +CL VADDVWEA VV+KLRETGMWVLLTTR E+ EP E+V +D L EAE+VLRG A L RLCD +MKVL ICG VAMD AFVGSW+S+RT N PKS++AW R+VEE+ AQ
Sbjct: 31 IEIGASAPVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNG----EKLDQILARLQPGPKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGER--------GD----------RVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTGDDGVSYVRKIVSQEKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPEERVVMDTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTT-NGVPKSNKAWERTVEELTAQ 410
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Match: A0A6H5K0A6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A6_9PHAE) HSP 1 Score: 311 bits (796), Expect = 3.850e-97 Identity = 221/540 (40.93%), Postives = 251/540 (46.48%), Query Frame = 1
Query: 55 MPVVGGLCTAVLNAKDMVDKASDNQVKLGKLCDRCCGITVQVIEKLQGTTSLTINVSPLENCFNELEGVA-----------------------------------------------------------------------------------------------------------------------------------------------ERYGKKGCCTRLAEFRKDDEDIRDLDKRISTAIADLTAAVVVEFGNLVQQRFGEILARLQPRPKLAPEPPGVPKGQAWHAVRGGVEDSVCDILGVDGGPVVAVLIGRSGAGKTTAAAA-MVGNRQGSIRPRAGETEDQARTRLLRLRARFSDGVVWLRVGEGSGDADHLPRLMLELAEGVGKVIEGVRAPEMGEAGESYVKKIVELKKKQCL*VADDVWEAEVVKKLRETGMWVLLTTRSSELVEPCEQVFVDRLGETEAENVLRGVANLSPDGRLCDDAMKVL*ICGGVAMDIAFVGSWSSMRTPDNCAPKSSRAWTRSVEEIEAQ 1242
MP VGGLCTAVLNA MVDKAS+NQ KL KLC+ CCGITVQV+EKLQG+ SLTINVSPLE+ GV R ++ V L Q + ARL PRPKL PPGVP GQ+WH +R GV D V ILG DGGP A L G+ GAGKTTAAAA MVG RQG I P A E E+QARTRL RLRARFSDGV+WLRVG+G+G +D LP LM +LA+ + + + G A CL VA+DVWE VV+KLRETGMW+LLTTR+ +VEP E+VFVDRL E EA+NVLR A L P LCD AMKVL +CG VAMDIAFVGSWSS+ T N APKSSRAW V EI AQ
Sbjct: 1 MPFVGGLCTAVLNANVMVDKASNNQAKLEKLCESCCGITVQVVEKLQGSRSLTINVSPLEDFLVFAIGVGFSSLGNDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSWTSSKTSYATSRQDKTVDNHVFLRQTPPVLVQARLPPRPKLVSVPPGVPMGQSWHTMRDGVVDRVYAILGGDGGPAAAALGGQRGAGKTTAAAAAMVGERQGPIHPLAHENEEQARTRLDRLRARFSDGVMWLRVGKGAGASDRLPLLMRKLAKALHEEVLKSHVDAPGVAA--------------CLVVAEDVWELPVVEKLRETGMWILLTTRNPSMVEPNEKVFVDRLEEMEAQNVLRRAARLPPGQSLCDAAMKVLEVCGYVAMDIAFVGSWSSVNTVGNFAPKSSRAWAGVVTEITAQ 526
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Match: A0A6H5KUE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE6_9PHAE) HSP 1 Score: 258 bits (660), Expect = 3.470e-80 Identity = 164/308 (53.25%), Postives = 197/308 (63.96%), Query Frame = 1
Query: 292 TRLAEFRKDDEDIRDLDKRISTAIADLTAAVVVEFGNLVQQRFGEILARLQPRPKLAPEPPGVPKGQAWHAVRGGVEDSVCDILGVDGGPVVAVLIGRSGAGKTTAAAAMVGNRQGSIRPRAGETEDQARTRLLRLRARFSDGVVWLRVGEGSGDADHLPRLMLELAEGVGKVI--EGVRAPEMGEAGESYVKKIVELKKKQCL*VADDVWEAEVVKKLRETGMWVLLTTRSSELVEPCEQVFVDRLGETEAENVLRGVANLSPDGRLCDDAMKVL*ICGGVAMDIAFVGSWSSMRTPDNCAPKSSRA 1209
+RLA FR ++I+ L I + + A VV + ++ ++LARLQPRP+LAP P G+P Q+W AVR GVED VC ILG P VA L GRSG GKTT+AAA++ R G I PRAGETED ARTRL R G GD + P LM LA+ + + + V P GE GESYV K V + + L VADDV E EVV+KLR+TGMWVLLTTR + +VEP E+V VD+L + EAE+VLRG A L RLCDDAMKVL ICG AMDIAFVGSWSS+RT DN AP SRA
Sbjct: 27 SRLARFRAFGDNIQGLRASIKAVVPIMGLAGVVN----LDEKLEKVLARLQPRPQLAPVPEGIPVRQSWPAVRHGVEDRVCRILGGGRRPAVAALTGRSGTGKTTSAAAVLRER-GPIHPRAGETEDMARTRLDR----------------GEGDENRSPSLMHTLAKARYEDVMEKRVDTPAAGEDGESYVNKFVSRESLRYLVVADDVREVEVVEKLRKTGMWVLLTTRIASMVEPNERVLVDQLTQEEAEDVLRGAAGLPVGYRLCDDAMKVLEICGLRAMDIAFVGSWSSVRTADNGAPIDSRA 313
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 222 bits (566), Expect = 4.550e-61 Identity = 150/430 (34.88%), Postives = 227/430 (52.79%), Query Frame = 1
Query: 1 MATNAIEVTTNILKIGEDMPVVGGLCTAVLNAKDMVDKASDNQVKLGKLCDRCCGITVQVIEKLQGTTSLTINVSPLENCFNELEGVAERYGKKGCCTRLAEFRKDDEDIRDLDKRISTAIADLTAAVVVEFGNLVQQ---RFGEILAR--LQPRPKLAPEPPGVPKGQAWHAVRGGVEDSVCDILGVDGGPVVAVLIGRSGAGKTTAAAAMVGNRQGSIRPRAGETEDQARTRLLRLRARFSDGVVWLRVGEGSGDADHLPRLMLELAEGVGKVIEGVRAPEMGEA----GESYVKKIVELK-----KKQCL*VADDVWEAEVVKKLRETGMWVLLTTRSSELVEPCEQ--VFVDRLGETEAENVLRGVANLSPDGRLCDDAMKVL*ICGGVAMDIAFVGSWSSMRTPDNCAPKSSRAWTRSVEEIEAQ 1242
M + A ++ ++G ++PVVG + + + + N +L L +RC +T VI K + T+S +NV+PLE+C N E R ++G C R + D++++ L+ R+ + DL A + V E++A+ + +A P G P +WH R V D+V + L P V L+GRSG+GKTT AA++VG G R ET DQ RL R+R F DGVVWLRVG G G A+ +P LM +LA+ V + ++ G + G +++ V K +K+CL VADDVWE +++++LR TGMWVL T+R +LVE E V VD+L + EAE +LRG A LS L A +V+ C +A + FVG WS+++ D+ W +V I+A+
Sbjct: 62 MGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLAEVIAQNTMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTG--RRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDD-----EEDWAEAVSAIDAE 484
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 223 bits (568), Expect = 5.860e-61 Identity = 164/430 (38.14%), Postives = 232/430 (53.95%), Query Frame = 1
Query: 1 MATNAIEVTTNILKIGEDMPVVGGLCTAVLNAKDMVDKASDNQVKLGKLCDRCCGITVQVIEKLQ-GTTSLTINVSPLENCFNELEGVAERYGKKGCCTRLAEFRKDDEDIRDLDKRISTAIADLTAAVVVEFGNLV--------------QQRFG--------EILARLQ------PRP--KLAPEPPGVPKGQAWHAVRGGVEDSVCDILGVDGGPVVAVLIGRSGAGKTTAAAAMVGNRQGSIRPRAGETEDQARTRLLRLRARFSDGVVWLRVGEGSGDADHLPRLMLELAEGVGKVIEGV--RAPEMGEAGESYVKKIVEL----KKKQCL*VADDVWEAEVVKKLRETGMWVLLTTRSSELVEPC--EQVFVDRLGETEAENVLRGVANLSPDGRLCDDAMKVL*ICGGVAMDIAFVGSWSSMR 1173
M + A +V + +GE++P++ + + ++ V+ N L L RC IT I K + G T L +V+PLE+C N +E ERY K+G +R+ + D DI L +R+ DL+ A + + Q+R G E+LA+ + P+P K+A P G P ++WH R V ++V L DGGP + L+G SGAGKTTAA+A+V + + +R FSDG+VWL V EG D +LP LML+LA+ V + I G R P + G +YVK+ VE K +CL VAD+VWE++VV +L ETGMW+LL+TR ELV+ E V VD L E EAE+VLR A LSP+ RL DDA ++ +CG VAMD+AFVG WS++R
Sbjct: 19 MGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGYTEL--DVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSS--------------------IVVRETFSDGIVWLPVNEGVHD--NLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVR 424
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.470e-53 Identity = 152/426 (35.68%), Postives = 222/426 (52.11%), Query Frame = 1
Query: 1 MATNAIEVTTNILKIGEDMPV-------VGGLCTAVLNAKDMVDKASDNQVKLGKLCDRCCGITVQVIEKLQGTTSLTINVSPLENCFNELEGVAERYGKKGCCTRLAEFRKDDEDI-------RDLDKRISTA--------IADLTAAVVVEFGN------LVQQRFGEILARLQPRP-KLAPEPPGVPKGQAWHAVRGGVEDSVCDILGVDGGPVVAVLIGRSGAGKTTAAAAMVGNRQGSIRPRAGETEDQARTRLLRLRARFSDGVVWLRVGEGSGDADHLPRLMLELAEGVGKVIEGVRAPEMGEAGESYVKKIVEL----KKKQCL*VADDVWEAEVVKKLRETGMWVLLTTRSSELV--EPCEQVFVDRLGETEAENVLRGVANLSPDGRLCDDAMKVL*ICGGVAMDIAFVGSWSSMR 1173
M + ++ T + ++GED+P + + + ++ V+ +NQ +L L RC +T V+ K + ++ ++++P+E C + ER G +G TR+ D E+I RDL+ +S A +DLTA V N ++ I+ RL P KLA P P ++WH R V + V + L GGP + L+G SG+GKTTAA+ +V R +R FSDGVVWL V G+ D LP LML+LA + + + G R P + G +Y+K+ ++ K +CL VAD+VWE EVV KL ETGMWVLL+TR ELV E V VD + E EAE+VLR + L P+ RL DDA+ ++ +CG VAMD+AFVG WS++R
Sbjct: 19 MGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIV--------------------RSNEVRQAFSDGVVWLTVNHGA--KDRLPSLMLQLAHMMCEEVGG-RRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVR 421
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 192 bits (487), Expect = 4.360e-50 Identity = 139/392 (35.46%), Postives = 205/392 (52.30%), Query Frame = 1
Query: 43 IGEDMPVVGGLCTAVLNAKDMVDKASDNQVKLGKLCDRCCGITVQVIEKLQGTTSLTINVSPLENCFNELEGVAERYGKKGCCTRLAEFRKDDEDIRDLDKRISTAIADL-TAAVVVEFGNL--VQQRFGEILARLQPRP----KLAPEPPGVPKGQAWHAVRGGVEDSVCDILGVDGGPVVAVLIGRSGAGKTTAAAAMVGNRQGSIRPRAGETEDQARTRLLRLRARFSDGVVWLRVGEGSGDADHLPRLMLELAEGVGKVIEGV--RAPEMGEAGESYVKKIVELKKK----QCL*VADDVWEAEVVKKLRETGMWVLLTTRSSELVEPC--EQVFVDRLGETEAENVLRGVANLSPDGRLCDDAMKVL*ICGGVAMDIAFVGSWSSMR 1173
+GE++PV+ + + + V+ +N+ +L L RC IT + K + S ++V+PL++C + AER ++G +R+ + D +I L+ + DL A + V G + +++ I RL+ P KLA P G P ++WH R +V D L V L G SG+GKTT AA +V R +R FSDG+VWL V EG+ LP LML+LA V + I G R P E +Y+K+ +E K +CL VAD+VWE +VV KL ETGMWVLL+TR +V+ + V VD L + +AE+VL+ A L + RL DDA+ ++ +CG VAMD+AFVG WS++R
Sbjct: 33 LGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIES-EVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIV--------------------RSTEVREAFSDGIVWLPVNEGA--KKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVR 401
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 179 bits (454), Expect = 7.710e-46 Identity = 134/374 (35.83%), Postives = 191/374 (51.07%), Query Frame = 1
Query: 145 LCDRCCGITVQVIEKLQGTTSLTINVSPLENCFNELEGVAERYGKKGCCTRLAEFRKDDEDIRDLDKRISTAIADLTAAVVVEFGNLVQQ---------------------RFGEILARLQPRPK-LAPEPPGVPKGQAWHAVRGGVEDSVCDILGVDGGPVVAVLIGRSGAGKTTAAAAMVGNRQGSIRPRAGETEDQARTRLLRLRARFSDGVVWLRVGEGSGDADHLPRLMLELAEGVGKVIEGV--RAPEMGEAGESYVKKIVEL----KKKQCL*VADDVWEAEVVKKLRETGMWVLLTTRSSELVEPCEQ---VFVDRLGETEAENVLRGVANLSPDGRLCDDAMKVL*ICGGVAMDIAFVGSWSSMR 1173
L RC IT VI + + +S + +PL C N + ER ++G +R+ + D E+I L +R+ DL A + G V+ + AR+ P+ LA P G P ++WH R V +VCD L +GGP + L+G SG+GKTTAAA +V R +R FSDG+VWL V +G+ + L LM+ LA V + I G R P + G +Y ++ ++ K +CL VAD+VWE V+ KL ETGMWVLL+TR LV E V VD L E +A +VLR + LSP+ RL D+A++++ +CG VAMD+AFVG WS++R
Sbjct: 53 LYQRCTYITGCVIVRCRKGSS-GLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIV--------------------RSTEVREAFSDGIVWLSVNDGA--TERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVR 403 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig886.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig886.19.1 >prot_P-littoralis_Contig886.19.1 ID=prot_P-littoralis_Contig886.19.1|Name=mRNA_P-littoralis_Contig886.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=300bp MATNAIEVTTNILKIGEDMPVVGGLCTAVLNAKDMVDKASDNQVKLGKLCback to top mRNA from alignment at P-littoralis_Contig886:51750..53169- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig886.19.1 ID=mRNA_P-littoralis_Contig886.19.1|Name=mRNA_P-littoralis_Contig886.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1420bp|location=Sequence derived from alignment at P-littoralis_Contig886:51750..53169- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig886:51750..53169- >mRNA_P-littoralis_Contig886.19.1 ID=mRNA_P-littoralis_Contig886.19.1|Name=mRNA_P-littoralis_Contig886.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=900bp|location=Sequence derived from alignment at P-littoralis_Contig886:51750..53169- (Pylaiella littoralis U1_48)back to top |