prot_P-littoralis_Contig88.72.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig88.72.1
Unique Nameprot_P-littoralis_Contig88.72.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length532
Homology
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 494 bits (1272), Expect = 2.710e-168
Identity = 318/510 (62.35%), Postives = 341/510 (66.86%), Query Frame = 0
Query:    1 MTMTDRTEEFRGAVKVFRPTVTVVNDSAEAAASRAQSDLGYQKTSEFLRLASSVAVGFEGTSKLIGRLKKLVGRKGFSNNPAAEISDVMKLFEEDMAGLQRDIALLQRHADGKTRGGPKANSQRQMHCSFIVTTLRKSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATPLDYPLFGNGATSGTGGARRRPMRGPPASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRXXXRSGGGPMNGASGQSAAPWPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITNGNTGSLMGGGRLAVPLNSAIGGVSPVAAGSGSGSGTYGGRGYDAAPPGAPSLPTEAFRSGRGATGLRKRPGREDGGDGEEESHRAAWQVQVQEDSKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 510
            MTMTDRT+EF GAV  FRPTVT VN+S EAA  RAQ+DLGY+KTSEFL+LA+SVAVGFEGTS+LIGRLKKLVGRKGFSNNPAAEISDVMKLFE DMAGLQ+DI+ LQR+ADG TRG P ANSQRQMHC+FIVTTLR+SAQEHTKAFRDAL+LRAAVEKQQNERQRKFSHSRGVAPAT LDYPLFG+   SG             A+ P XXXXXXXXXXX                                       SG G      G   + WPQ                                            XXXXX    ++      G    P   +  G  P AAG GSG      R + AAPPG P L TEA R G  ATGLRKRPGREDGGD EEES RAAWQVQVQEDSKTRVDESHKVEKMIG+LG MFSRFS+MVAAQEEVVMHIEDDVEAAHAFAEEGQ HLAKYYQI SGNRGIIIKVFIMLI+ IWVFL
Sbjct:    1 MTMTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRYADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGS---SGXXXXXXXXXXXXTANLPSXXXXXXXXXXXDNKGHKHGPRKGGKAASVLPFP-----------------SGNGGTRAGGGTGGSSWPQKSAVPAPWSAEGGRNGNGNNCSTGVGKGGYDAVGAMPRATEPAAXXXXXXXRTDSNGGFRAGPHTAPTFGSANGYVPPAAGGGSG------RAHAAAPPGFPPLRTEASRGGGRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 484          
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.040e-26
Identity = 67/184 (36.41%), Postives = 111/184 (60.33%), Query Frame = 0
Query:    3 MTDRTEEFRGAVKVFRPTVTVVNDSAEAAASRAQSDLGYQKTSEFLRLASSVAVGFEGTSKLIGRLKKLVGRKGFSNNPAAEISDVMKLFEEDMAGLQRDIALLQRHADGKT--RGGPKANSQRQMHCSFIVTTLRKSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATPLDYPLF 184
            M DRT EF+G ++V        +D       + ++     + ++F +  S++A+  EGT+KLI +L +LVGRKG SN+P  EI+DV +LF+ DM  +Q++++ LQ   DG++  RG P   SQR  H  +++  L++ AQE   AF+ AL  R AV ++ N+R++ +S +R V  +  ++ PLF
Sbjct:    1 MIDRTAEFQGCIRVLHQ-----HDGRPDQRPQYEAP----QPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175          
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.350e-23
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 0
Query:  438 MIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVF 509
            MIGELG MFS+FS++VAAQEE V+HIEDDVE AH FA +G  HL++YYQ +SGNRGII+KV I+L  F+WVF
Sbjct:    1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSRYYQTISGNRGIIVKVLILLAFFVWVF 72          
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: I2CQ48_NANGC (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ48_NANGC)

HSP 1 Score: 82.0 bits (201), Expect = 3.460e-15
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 0
Query:  422 QEDSKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFLR 511
            Q D+ +R+ E+  VEK I ELGQ FSR + +VAAQ EVVM I+DD+EAA    ++G   +  Y +I+ GNR +I KVF +L++FI VF+R
Sbjct:   25 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVMRIDDDMEAALEDVQKGHAEMVNYLRIVKGNRAVIFKVFALLLVFIVVFVR 114          
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A7S2XXW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXW7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 8.910e-15
Identity = 42/92 (45.65%), Postives = 62/92 (67.39%), Query Frame = 0
Query:  419 VQVQEDSKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 510
             ++Q  SK RV+E+  +E  I E   MFS+ ++MVA Q E+V  I+DD+E A      G   L +YY I+SGNRG+IIK+FI L++FI++F+
Sbjct:   10 AELQTSSKQRVEEARSIEATISEFATMFSKMATMVAQQGELVTRIDDDMELALGNVSAGHTELTRYYSIISGNRGLIIKIFITLMVFIFLFV 101          
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN)

HSP 1 Score: 77.0 bits (188), Expect = 1.060e-13
Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = 0
Query:  421 VQEDSKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 510
            +++ S+ R+D +H +EK IG+LG++FSRFSS+VA Q EVV  ++DDVE A    E G   L K  +++ GNR + +KVF +LI  I +F+
Sbjct:    2 LEQTSRRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLKAQEVLRGNRALFLKVFAVLIALIVLFV 91          
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 3.320e-13
Identity = 45/90 (50.00%), Postives = 64/90 (71.11%), Query Frame = 0
Query:  422 QEDSKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFLR 511
            Q D+ +R+ E+  VEK I ELGQ FSR + +VAAQ EVV+ I+DD+EAA    ++G V +  Y +I+ GNR +I KVF +L++FI VF+R
Sbjct:  278 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVVRIDDDMEAALEDVQKGHVEMVNYLRIVKGNRAVIFKVFALLLVFIVVFVR 367          
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A7S3H3X9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3X9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.760e-12
Identity = 39/84 (46.43%), Postives = 59/84 (70.24%), Query Frame = 0
Query:  427 TRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 510
            +R +    V+K IGEL QMFS+ + +V AQEE++  I+ D+++     +EGQ HL KY+Q +S NRG+IIKVF++LI F+  F+
Sbjct:  216 SRAEAVQNVQKTIGELAQMFSKMAVLVTAQEEMIQRIDSDLDSTITNVDEGQQHLLKYFQYISSNRGLIIKVFLILIFFVVFFV 299          
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A485LIS1_9STRA (Aste57867_21905 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS1_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.600e-11
Identity = 37/86 (43.02%), Postives = 64/86 (74.42%), Query Frame = 0
Query:  425 SKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 510
            +++R++++  VE MIGE+G M+SR + ++A QEE++  IEDD+  AH+  E G   L KY+  +S NR +I+K+F++L++FI++FL
Sbjct:  240 AQSRLNDAQNVEAMIGEIGGMYSRMTGLLANQEEMLGRIEDDMTTAHSNVEGGYEELMKYFSTVSSNRSLILKIFLVLLVFIYLFL 325          
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A6G0WSE7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSE7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.230e-10
Identity = 35/86 (40.70%), Postives = 62/86 (72.09%), Query Frame = 0
Query:  425 SKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 510
            ++ R++++  +E  I E+G M+SR + ++A+QEE++  IEDD+  AHA  E G   L KY+  +S NR +I+K+F++L++FI++FL
Sbjct:  224 AQARLNDAQHMEATISEIGGMYSRMTGLLASQEEMLGRIEDDMTTAHANVESGYEELMKYFSTVSSNRSLILKIFLILLLFIYLFL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE2.710e-16862.35t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z5V3_9STRA3.040e-2636.41Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZFW2_9STRA1.350e-2369.44t-SNARE coiled-coil homology domain-containing pro... [more]
I2CQ48_NANGC3.460e-1550.00t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2XXW7_9STRA8.910e-1545.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0Y6L6_AURAN1.060e-1345.56t-SNARE coiled-coil homology domain-containing pro... [more]
A0A4D9CWV4_9STRA3.320e-1350.00t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3H3X9_9STRA5.760e-1246.43Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A485LIS1_9STRA3.600e-1143.02Aste57867_21905 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WSE7_9STRA1.230e-1040.70t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availableGENE3D1.20.5.110coord: 415..511
e-value: 6.0E-16
score: 60.0
NoneNo IPR availableGENE3D1.20.58.70coord: 41..205
e-value: 4.7E-10
score: 41.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 368..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..292
NoneNo IPR availablePANTHERPTHR19957:SF3SYNTAXIN-5coord: 418..510
NoneNo IPR availablePANTHERPTHR19957:SF3SYNTAXIN-5coord: 3..175
NoneNo IPR availableCDDcd15844SNARE_syntaxin5coord: 425..509
e-value: 2.41432E-35
score: 125.317
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 418..485
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 417..484
e-value: 2.4E-7
score: 40.4
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 459..510
e-value: 1.2E-7
score: 31.6
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 422..484
score: 10.747887
IPR045242SyntaxinPANTHERPTHR19957SYNTAXINcoord: 418..510
coord: 3..175
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 45..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig88contigP-littoralis_Contig88:325437..330663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig88.72.1mRNA_P-littoralis_Contig88.72.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig88 325372..331027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig88.72.1 ID=prot_P-littoralis_Contig88.72.1|Name=mRNA_P-littoralis_Contig88.72.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=532bp
MTMTDRTEEFRGAVKVFRPTVTVVNDSAEAAASRAQSDLGYQKTSEFLRL
ASSVAVGFEGTSKLIGRLKKLVGRKGFSNNPAAEISDVMKLFEEDMAGLQ
RDIALLQRHADGKTRGGPKANSQRQMHCSFIVTTLRKSAQEHTKAFRDAL
LLRAAVEKQQNERQRKFSHSRGVAPATPLDYPLFGNGATSGTGGARRRPM
RGPPASPPPPPVPAPEVEDDEDNKGHHRSVGGGRGVAAAVASSLPLPFPS
GKPGRGMGRSGGGPMNGASGQSAAPWPQKPRPPPWPAEGNTNIDSRAAGG
SVGVAGMGAGYGAEVTPAAAAAAAAAAITNGNTGSLMGGGRLAVPLNSAI
GGVSPVAAGSGSGSGTYGGRGYDAAPPGAPSLPTEAFRSGRGATGLRKRP
GREDGGDGEEESHRAAWQVQVQEDSKTRVDESHKVEKMIGELGQMFSRFS
SMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFI
MLIIFIWVFLRRGGGWFVLLFFVPIDECGHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR045242Syntaxin
IPR010989SNARE