mRNA_P-littoralis_Contig88.72.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig88.72.1
Unique NamemRNA_P-littoralis_Contig88.72.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 496 bits (1277), Expect = 6.040e-167
Identity = 318/510 (62.35%), Postives = 341/510 (66.86%), Query Frame = 3 
Query:   66 MTMTDRTEEFRGAVKVFRPTVTVVNDSAEAAASRAQSDLGYQKTSEFLRLASSVAVGFEGTSKLIGRLKKLVGRKGFSNNPAAEISDVMKLFEEDMAGLQRDIALLQRHADGKTRGGPKANSQRQMHCSFIVTTLRKSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATPLDYPLFGNGATSGTGGARRRPMRGPPASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRXXXRSGGGPMNGASGQSAAPWPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITNGNTGSLMGGGRLAVPLNSAIGGVSPVAAGSGSGSGTYGGRGYDAAPPGAPSLPTEAFRSGRGATGLRKRPGREDGGDGEEESHRAAWQVQVQEDSKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 1595
            MTMTDRT+EF GAV  FRPTVT VN+S EAA  RAQ+DLGY+KTSEFL+LA+SVAVGFEGTS+LIGRLKKLVGRKGFSNNPAAEISDVMKLFE DMAGLQ+DI+ LQR+ADG TRG P ANSQRQMHC+FIVTTLR+SAQEHTKAFRDAL+LRAAVEKQQNERQRKFSHSRGVAPAT LDYPLFG+   SG             A+ P XXXXXXXXXXX                                       SG G      G   + WPQ                                            XXXXX    ++      G    P   +  G  P AAG GSG      R + AAPPG P L TEA R G  ATGLRKRPGREDGGD EEES RAAWQVQVQEDSKTRVDESHKVEKMIG+LG MFSRFS+MVAAQEEVVMHIEDDVEAAHAFAEEGQ HLAKYYQI SGNRGIIIKVFIMLI+ IWVFL
Sbjct:    1 MTMTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRYADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGS---SGXXXXXXXXXXXXTANLPSXXXXXXXXXXXDNKGHKHGPRKGGKAASVLPFP-----------------SGNGGTRAGGGTGGSSWPQKSAVPAPWSAEGGRNGNGNNCSTGVGKGGYDAVGAMPRATEPAAXXXXXXXRTDSNGGFRAGPHTAPTFGSANGYVPPAAGGGSG------RAHAAAPPGFPPLRTEASRGGGRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFL 484
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BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.350e-26
Identity = 67/184 (36.41%), Postives = 111/184 (60.33%), Query Frame = 3 
Query:   72 MTDRTEEFRGAVKVFRPTVTVVNDSAEAAASRAQSDLGYQKTSEFLRLASSVAVGFEGTSKLIGRLKKLVGRKGFSNNPAAEISDVMKLFEEDMAGLQRDIALLQRHADGKT--RGGPKANSQRQMHCSFIVTTLRKSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATPLDYPLF 617
            M DRT EF+G ++V        +D       + ++     + ++F +  S++A+  EGT+KLI +L +LVGRKG SN+P  EI+DV +LF+ DM  +Q++++ LQ   DG++  RG P   SQR  H  +++  L++ AQE   AF+ AL  R AV ++ N+R++ +S +R V  +  ++ PLF
Sbjct:    1 MIDRTAEFQGCIRVLHQ-----HDGRPDQRPQYEAP----QPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175
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BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.110e-23
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 3 
Query: 1377 MIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVF 1592
            MIGELG MFS+FS++VAAQEE V+HIEDDVE AH FA +G  HL++YYQ +SGNRGII+KV I+L  F+WVF
Sbjct:    1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSRYYQTISGNRGIIVKVLILLAFFVWVF 72
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BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: I2CQ48_NANGC (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ48_NANGC)

HSP 1 Score: 82.0 bits (201), Expect = 4.550e-15
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 3 
Query: 1329 QEDSKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFLR 1598
            Q D+ +R+ E+  VEK I ELGQ FSR + +VAAQ EVVM I+DD+EAA    ++G   +  Y +I+ GNR +I KVF +L++FI VF+R
Sbjct:   25 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVMRIDDDMEAALEDVQKGHAEMVNYLRIVKGNRAVIFKVFALLLVFIVVFVR 114
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BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A7S2XXW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXW7_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.160e-14
Identity = 42/92 (45.65%), Postives = 62/92 (67.39%), Query Frame = 3 
Query: 1320 VQVQEDSKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 1595
             ++Q  SK RV+E+  +E  I E   MFS+ ++MVA Q E+V  I+DD+E A      G   L +YY I+SGNRG+IIK+FI L++FI++F+
Sbjct:   10 AELQTSSKQRVEEARSIEATISEFATMFSKMATMVAQQGELVTRIDDDMELALGNVSAGHTELTRYYSIISGNRGLIIKIFITLMVFIFLFV 101
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BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN)

HSP 1 Score: 77.0 bits (188), Expect = 1.370e-13
Identity = 41/90 (45.56%), Postives = 62/90 (68.89%), Query Frame = 3 
Query: 1326 VQEDSKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 1595
            +++ S+ R+D +H +EK IG+LG++FSRFSS+VA Q EVV  ++DDVE A    E G   L K  +++ GNR + +KVF +LI  I +F+
Sbjct:    2 LEQTSRRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLKAQEVLRGNRALFLKVFAVLIALIVLFV 91
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BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.020e-13
Identity = 45/90 (50.00%), Postives = 64/90 (71.11%), Query Frame = 3 
Query: 1329 QEDSKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFLR 1598
            Q D+ +R+ E+  VEK I ELGQ FSR + +VAAQ EVV+ I+DD+EAA    ++G V +  Y +I+ GNR +I KVF +L++FI VF+R
Sbjct:  278 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVVRIDDDMEAALEDVQKGHVEMVNYLRIVKGNRAVIFKVFALLLVFIVVFVR 367
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BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A7S3H3X9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3X9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 8.290e-12
Identity = 39/84 (46.43%), Postives = 59/84 (70.24%), Query Frame = 3 
Query: 1344 TRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 1595
            +R +    V+K IGEL QMFS+ + +V AQEE++  I+ D+++     +EGQ HL KY+Q +S NRG+IIKVF++LI F+  F+
Sbjct:  216 SRAEAVQNVQKTIGELAQMFSKMAVLVTAQEEMIQRIDSDLDSTITNVDEGQQHLLKYFQYISSNRGLIIKVFLILIFFVVFFV 299
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BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: F8NEK7_SERL9 (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Serpula lacrymans var. lacrymans TaxID=341189 RepID=F8NEK7_SERL9)

HSP 1 Score: 75.9 bits (185), Expect = 5.550e-11
Identity = 59/211 (27.96%), Postives = 100/211 (47.39%), Query Frame = 3 
Query:   66 MTMTDRTEEFRGAVKVFRPTVTVVNDSAEAAASRAQSDLGYQKTSEFLRLASSVAVGFEGTSKLIGRLKKLVGRKGFSNNPAAEISDVMKLFEEDMAGLQRDIALLQRHADGK-TRGGPKANSQRQM--HCSFIVTTLRKSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPA-TPLDYPLFGNGATSGTGGARRRPMRGPPASP 686
            M + DRT+EF   V+  R         AE      Q+    +  S+F R+A+++      T+  +G+L +L  RK   ++   EIS++  + ++D+AG+ + IA+LQ +   K T G  K++  +Q+  H   +V  L+    + + +F+D L LR    K+  +R  KF H+   A    P    LF N    G G   R   +G   +P
Sbjct:    1 MGIQDRTDEFHTCVESIRHRSAFPPRGAEVKQRLLQTYEKSRAKSDFSRMAAAIGKDISSTTIKLGKLAQLAKRKTLFDDRPVEISELTFIIKQDIAGINKQIAVLQAYIKQKNTPGSQKSSEGKQLDEHTHNVVMMLQNKLADTSMSFKDVLELRTQNMKEARDRTEKFMHTTSSATNHAPPSSLLFNNQDPMGDGSLGRTNSKGKGRAP 211
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BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Match: A0A485LIS1_9STRA (Aste57867_21905 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS1_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 6.030e-11
Identity = 37/86 (43.02%), Postives = 64/86 (74.42%), Query Frame = 3 
Query: 1338 SKTRVDESHKVEKMIGELGQMFSRFSSMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFIMLIIFIWVFL 1595
            +++R++++  VE MIGE+G M+SR + ++A QEE++  IEDD+  AH+  E G   L KY+  +S NR +I+K+F++L++FI++FL
Sbjct:  240 AQSRLNDAQNVEAMIGEIGGMYSRMTGLLANQEEMLGRIEDDMTTAHSNVEGGYEELMKYFSTVSSNRSLILKIFLVLLVFIYLFL 325
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig88.72.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE6.040e-16762.35t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z5V3_9STRA2.350e-2636.41Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZFW2_9STRA2.110e-2369.44t-SNARE coiled-coil homology domain-containing pro... [more]
I2CQ48_NANGC4.550e-1550.00t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2XXW7_9STRA1.160e-1445.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0Y6L6_AURAN1.370e-1345.56t-SNARE coiled-coil homology domain-containing pro... [more]
A0A4D9CWV4_9STRA5.020e-1350.00t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3H3X9_9STRA8.290e-1246.43Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
F8NEK7_SERL95.550e-1127.96t-SNARE coiled-coil homology domain-containing pro... [more]
A0A485LIS1_9STRA6.030e-1143.02Aste57867_21905 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig88contigP-littoralis_Contig88:325372..331027 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LR19
Preferred nameSTX5
PFAMsSNARE,Syntaxin-5_N
Model size2025
Max annot lvl2759|Eukaryota
KEGG koko:K08490
KEGG Pathwayko04130,map04130
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000149,GO:0000278,GO:0000280,GO:0000281,GO:0000902,GO:0000910,GO:0001505,GO:0002164,GO:0002376,GO:0002520,GO:0002790,GO:0003674,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0005801,GO:0005886,GO:0006810,GO:0006836,GO:0006873,GO:0006875,GO:0006878,GO:0006886,GO:0006887,GO:0006888,GO:0006891,GO:0006900,GO:0006901,GO:0006903,GO:0006904,GO:0006906,GO:0006996,GO:0007030,GO:0007049,GO:0007112,GO:0007140,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007276,GO:0007283,GO:0007346,GO:0008104,GO:0008150,GO:0008283,GO:0008361,GO:0009306,GO:0009653,GO:0009791,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010256,GO:0010604,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016079,GO:0016081,GO:0016192,GO:0016197,GO:0016482,GO:0017156,GO:0019222,GO:0019725,GO:0019953,GO:0022402,GO:0022406,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0023061,GO:0030003,GO:0030097,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031201,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032940,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033116,GO:0033206,GO:0034498,GO:0034613,GO:0035166,GO:0035167,GO:0042147,GO:0042175,GO:0042176,GO:0042592,GO:0042802,GO:0042803,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045055,GO:0045184,GO:0045732,GO:0045786,GO:0045930,GO:0046903,GO:0046907,GO:0046916,GO:0046983,GO:0047485,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048232,GO:0048278,GO:0048280,GO:0048284,GO:0048285,GO:0048308,GO:0048313,GO:0048489,GO:0048513,GO:0048518,GO:0048519,GO:0048523,GO:0048534,GO:0048542,GO:0048569,GO:0048609,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051726,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0060255,GO:0060305,GO:0061024,GO:0061025,GO:0061640,GO:0065003,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0090114,GO:0090166,GO:0090174,GO:0097479,GO:0097480,GO:0097708,GO:0098588,GO:0098771,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:0140013,GO:0140029,GO:0140056,GO:1903008,GO:1903046,GO:1903047,GO:1903358
Exons8
Evalue3.29e-176
EggNOG OGsKOG0812@1|root,KOG0812@2759|Eukaryota
Ec32 ortholog descriptionSoluble NSF Attachment Protein (SNAP) Receptor (SNARE)
Ec32 orthologEc-06_004720.1
Descriptionvesicle docking
Cds size1596
COG categoryU
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig88.72.1prot_P-littoralis_Contig88.72.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig88 325437..330663 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791765.2289517-UTR-P-littoralis_Contig88:325371..3254361680791765.2289517-UTR-P-littoralis_Contig88:325371..325436Pylaiella littoralis U1_48UTRP-littoralis_Contig88 325372..325436 +
1680791765.3352451-UTR-P-littoralis_Contig88:330663..3310271680791765.3352451-UTR-P-littoralis_Contig88:330663..331027Pylaiella littoralis U1_48UTRP-littoralis_Contig88 330664..331027 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791765.242702-CDS-P-littoralis_Contig88:325436..3256281680791765.242702-CDS-P-littoralis_Contig88:325436..325628Pylaiella littoralis U1_48CDSP-littoralis_Contig88 325437..325628 +
1680791765.2589655-CDS-P-littoralis_Contig88:327167..3272981680791765.2589655-CDS-P-littoralis_Contig88:327167..327298Pylaiella littoralis U1_48CDSP-littoralis_Contig88 327168..327298 +
1680791765.2685325-CDS-P-littoralis_Contig88:327739..3278811680791765.2685325-CDS-P-littoralis_Contig88:327739..327881Pylaiella littoralis U1_48CDSP-littoralis_Contig88 327740..327881 +
1680791765.2778397-CDS-P-littoralis_Contig88:328252..3289881680791765.2778397-CDS-P-littoralis_Contig88:328252..328988Pylaiella littoralis U1_48CDSP-littoralis_Contig88 328253..328988 +
1680791765.2877338-CDS-P-littoralis_Contig88:329296..3293971680791765.2877338-CDS-P-littoralis_Contig88:329296..329397Pylaiella littoralis U1_48CDSP-littoralis_Contig88 329297..329397 +
1680791765.3029914-CDS-P-littoralis_Contig88:330070..3302161680791765.3029914-CDS-P-littoralis_Contig88:330070..330216Pylaiella littoralis U1_48CDSP-littoralis_Contig88 330071..330216 +
1680791765.3132782-CDS-P-littoralis_Contig88:330456..3305381680791765.3132782-CDS-P-littoralis_Contig88:330456..330538Pylaiella littoralis U1_48CDSP-littoralis_Contig88 330457..330538 +
1680791765.3255951-CDS-P-littoralis_Contig88:330597..3306631680791765.3255951-CDS-P-littoralis_Contig88:330597..330663Pylaiella littoralis U1_48CDSP-littoralis_Contig88 330598..330663 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig88.72.1

>prot_P-littoralis_Contig88.72.1 ID=prot_P-littoralis_Contig88.72.1|Name=mRNA_P-littoralis_Contig88.72.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=532bp
MTMTDRTEEFRGAVKVFRPTVTVVNDSAEAAASRAQSDLGYQKTSEFLRL
ASSVAVGFEGTSKLIGRLKKLVGRKGFSNNPAAEISDVMKLFEEDMAGLQ
RDIALLQRHADGKTRGGPKANSQRQMHCSFIVTTLRKSAQEHTKAFRDAL
LLRAAVEKQQNERQRKFSHSRGVAPATPLDYPLFGNGATSGTGGARRRPM
RGPPASPPPPPVPAPEVEDDEDNKGHHRSVGGGRGVAAAVASSLPLPFPS
GKPGRGMGRSGGGPMNGASGQSAAPWPQKPRPPPWPAEGNTNIDSRAAGG
SVGVAGMGAGYGAEVTPAAAAAAAAAAITNGNTGSLMGGGRLAVPLNSAI
GGVSPVAAGSGSGSGTYGGRGYDAAPPGAPSLPTEAFRSGRGATGLRKRP
GREDGGDGEEESHRAAWQVQVQEDSKTRVDESHKVEKMIGELGQMFSRFS
SMVAAQEEVVMHIEDDVEAAHAFAEEGQVHLAKYYQIMSGNRGIIIKVFI
MLIIFIWVFLRRGGGWFVLLFFVPIDECGHG*
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mRNA from alignment at P-littoralis_Contig88:325372..331027+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig88.72.1 ID=mRNA_P-littoralis_Contig88.72.1|Name=mRNA_P-littoralis_Contig88.72.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5656bp|location=Sequence derived from alignment at P-littoralis_Contig88:325372..331027+ (Pylaiella littoralis U1_48)
GGATAGGCGGAGGGGGTCAGGGAGGACCACAGCAGTGGTCGAATTGCCGC
TGCCGTAGCAGAGACATGACCATGACGGACCGAACGGAAGAGTTCCGTGG
AGCAGTCAAGGTGTTCCGACCGACGGTTACGGTGGTCAACGACAGCGCCG
AAGCAGCAGCTAGCAGAGCTCAATCCGACCTCGGTTATCAGAAGACGTCG
GAGTTTCTCCGGCTTGCTTCCAGCGTCGCTGTCGGCTTCGAGGGCACATC
AAAACTGGTGAGCAATAAAACTGCTCTGAAGTCTGTGTAAAGTTCCAGCC
ACAGGGTAGGGTAGGTTACTCATAGGGGAGGGGAGGGGAGGGTGCTTGTT
CTTCTGCCGGATGGGTGGTGGTGAGCTGGTTCCGGATGCAAGGGGCACAC
AGCTCCCACAGCTCGTCAATGTGAGAATCAACAAGTGAGTGCTGCCCGCT
GCTCTCCTATGCGCAGTACTATTGAACTGTAATCATACCTGGCACCAGGT
ACGTTGTAGTACCGCATGTAAAGGAGGCAGAAACTCGTAAACAGCAGTCC
ATGTGCCGTTCTGCTTGCAGGAGCAGCAGCAGCACAAGTGGTGCAGATGA
GATTTGTCAACAGCGGCCTAAACGAAATAGATGCTGGTACTGCTGTATGT
ACAGCAGTACAGCAGACAGAGCACAGCGGGAACATTTGAACAGTACAGCA
GCATGATTCGTACGATTATGATACAGCATTCTGGCTTTCATATACAGCAG
CAGTATGTGTATCTCAGTCCACAGATATCGGTATGTACTGCTGCTGTGTC
CTCTTTCGCTTTGACTGCGTGGGTGAACTGTCTACCGTGTGCTTCAGCTG
CTGCGCATAGCCCTGCTGCACATGATCGAACCTATTGATAACACGAGCGA
GATTATCCAAAGATCATTCACGGAGCCGCAGTTCAACTGCTGCTGCGGTT
CTCAGCCTCAAGCTATTTTACACCTCCTCGTCTCTATTAGTACGAAGTAC
AAAGTACAAGTTATATACCAGTTTTGACTTACAGACAGCAGTGCATTAAT
ATAATTCCTGTACTGCGGTACTATGCACTAGCTGGCCTACGTGGTCCTTG
TCACACAACAATCCTGCGTCGAAGGATATCATACGAGCTTATCTTGCATA
CAATCAGCCCAGGATGCCTGACTTCAATCGACCAATCATGGCGGCACACG
AGTGCACGGAGGAAGCGGTTCAAGCAAAAGTATTGTCTGCGAAGTACGAG
TACGATGCATGCCCATGTTGGCGGATTCGTTTGTATATACGCTTCTGGCG
AGCAAAAATCCTTGCGAGGCTAGTGTGCAGGACTTGCGGCCGTCAAACTT
GCGCCCAACGAGACAGCGCTGCCCGGTAACAGCAGTGGGAACGAGCCCAC
GACGGTAATCCCACGCCATACGGTACAGCTGTCCACCTGCTGCATTTTGC
AGTCTACGTTACTGCTGTAACATAAAAGTGATCGGAAGCACTCCAGCCTT
CGTCGGAGTGAACGTGCATTTGGAACAGAGCCGTGCAGACGAAACTCCCT
CATCACGACTCTGCTTGTTGCGTTGTGGTTCGCGCCCTGCTCTGTGTGGA
AGTGATCCAACAGAAAGCTGGTGCGCTGCTTTTCGAATACACGTTTCATA
CGTATGCATGTACTGCTGTAGCAGTGGTGTCTCGTTTTTCGGAGCTCTTG
CCCAACGATAAAAATCTACCTCTAAATAACACACGGCCCTGAACAGGTGT
ACCTGATACGAATTAAACGATATTACCGTACTTCGACTTTTGTCAGATCG
GGCGACTCAAGAAGCTCGTGGGGCGCAAGGGCTTTAGCAACAACCCCGCT
GCCGAGATCAGCGACGTCATGAAGCTCTTCGAGGAGGACATGGCCGGCTT
GCAGAGAGACATCGCGTTGCTGCAGAGGTGCGTGTGTATGCGCGGGTGTG
CGATGTGCTCCAGGGGACGCCCACTCGGTCATCCCCGAGTTCTGTAAAGA
AAAACGCGTACAGTTCAACCCGGGGATGGACCCAGGGTGCCCCCTGATGA
TCGGTGTGTGTCGATGGCTGCACGAGTAGTCGTCATTGTCTCGGGCCTGC
AGATGAGTAAGTCTCTTCGACTTGTTTTTACCGTCAGTTCTGTGGTGTGG
TGGTATGGTATGATAGCCAAACTCGAGCGGCGACAACTACCCGGCTGTAC
AAGGTAGCGACCTCACAAAGTTCCAAGTTACGGCGTGGGATACTGTTTCA
AAAACAACGGCAACCGTTTTTATCGCACCAACACAGCACCCCCCACCCAC
CTCGCCCCCCCCCCTCGCCCTTCTCGCTCGCTCGCTCTTTATCAAAACGG
AAACGACTACAAATACAGACACGCTGACGGTAAGACTAGGGGGGGCCCCA
AGGCCAACAGCCAGCGACAGATGCACTGCTCGTTTATCGTGACGACGCTC
CGAAAGAGCGCCCAGGAGCACACCAAGGCCTTTCGAGACGCGCTCTTGCT
TCGCGCAGCGGTGAGTGAAGGGAGGCAGCAGCGTGCTTGATTTGCTGACT
TCTTTACTGCTGTACCATGTACTGGGAAACCATGTGTGGAAGGAGTTGTG
GAAGGGGTGGGGAGCGGGAACAGGCAGGGCGGGGGGGCGTTTACGCGTGG
CAGTTGGAGGGGGGGGGGGCGTCAGGAGAGGAAGGGCTGCATGCGTGCCA
TGGGTTCTTGTTTGTCTCGGCACGCCGGCCGCTCTAAATCAGCACTAAAT
ATTATTGTCGAGTCGGCCGCGCGAGTAAAATTCCTGCTCTCCAGGATCAT
GCTGTTGCAGCTGCGTAGCGATGGCACAAGAGCTCGCCACCGATGTCGTG
TTTTTTCGTTCTGGAAATTTTCGAATTTCAGGTGGAAAAGCAGCAAAACG
AACGGCAGCGCAAGTTCTCGCATTCCCGCGGCGTGGCCCCCGCGACCCCC
CTAGACTACCCCCTCTTCGGGAATGGTGCGACCAGCGGCACTGGGGGGGC
GCGACGTCGGCCTATGCGGGGCCCCCCGGCCTCCCCTCCGCCCCCCCCTG
TTCCCGCCCCCGAGGTCGAAGACGACGAAGACAACAAGGGGCACCATAGG
AGCGTGGGAGGGGGAAGAGGGGTGGCGGCAGCGGTAGCTTCATCGTTGCC
GTTGCCGTTCCCTTCTGGGAAGCCAGGGAGAGGGATGGGAAGGAGCGGTG
GGGGGCCGATGAATGGTGCTAGCGGCCAGAGTGCCGCTCCCTGGCCTCAG
AAGCCACGGCCGCCACCGTGGCCGGCAGAGGGAAACACCAACATTGACAG
CCGTGCCGCCGGTGGTAGTGTAGGAGTGGCAGGAATGGGGGCGGGATATG
GTGCTGAAGTGACTCCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGATC
ACAAACGGAAACACTGGGTCCTTGATGGGGGGGGGGAGGTTGGCCGTGCC
TCTAAACAGTGCTATCGGGGGGGTGTCGCCCGTCGCTGCGGGGAGCGGCA
GCGGTAGTGGCACGTACGGAGGAAGGGGATATGACGCAGCACCGCCAGGA
GCTCCATCGCTTCCAACGGAGGCATTTAGGAGCGGCCGGGGAGCCACTGG
GCTGCGAAAACGACCGGGTGAGATGGGATGAGAAGTTGGTGAAGAGCGTT
GGTTCGGAGTTTCGAGGGTACCGGTAGTCGAAGAGGTATGGTAGTGGAGC
TTTCGTGACTTTTTTTGTCGTCGTCTTCTCACTCTTGGAGGTCACGCAGT
GTGCTTATGTTGGCGTTGATTGTTTTTCCTTTCTCCCTCTCTCTCCACAC
CTCTCCCCCCTTTCGATTGCTGTCATACTCCCCTCATATTCCCTCACATT
TCTTCTGCTGTATGTCAAGGATTACCTTCTTGTCTTTCGTTTGGTTTCCG
TTTGCCCCTGGTGCTTCTACCGCAGGACGAGAAGACGGGGGCGACGGGGA
GGAGGAATCTCACCGGGCGGCTTGGCAGGTGCAGGTTCAGGAGGATTCGA
AGACGAGGGTGGACGAGTCACACAAGGTGCATGAAAACGAGCAGCGACGG
TGATTTATTGCCTGGTGGCACGAAGTCCGGTTTGTTGGCCGTCGCGCCTA
TCCTTAGGGTCTTTTCTCAGAACCTGAAGGCTCAGAGCGTGAGATGTGTC
GGTTTGAAAGCAAATCGCTCATTTTCATGCATTAGACTCGTCCAACCAAG
GCAAACTCGCAACTGCAAAAAAATGTTGTATTTCCAAAAGAGCCATTGTA
ACACAACAAGCTTGAACGAATATCGCACACCGGAAACAGGCCGTGTAGAT
TTTTGTAGCCCATCAAAATCAGGCCTGGCCTTTGTTTTCCTTGTTGTTGT
TGTTGTTGTTGCTGCTGTTGTTGATTTTACGATTTTCTGCTGTTGACTGT
CTTTTGTTTACACGTTCGTTGCTGTTGCAGCAACATCAAAGCCCGTTCCG
GATCTTTCCCAGTACGTACCTCCAATATTTCGGAAATTCTCATTCAATCA
ATCCGTGAGAGACAAGGTCCTTCCGTGGTCCTGCACAGTACGGAGTATTC
ATTAAGATGGTGTCATTCAGAGGAAATCGGTCATCACAGGCTGACAACCA
CGTGTTAACAACACAAGCCACATCCAACCGAACCGAACCGAGTCGAATAA
CATTCCACACGCCACACTCACATGCAAGAAAACAAAATGTAAAAAAAAGG
TGGAGAAGATGATCGGCGAGCTGGGGCAAATGTTTAGCCGGTTCTCCTCA
ATGGTCGCGGCGCAAGAAGAAGTGGTGATGCACATCGAGGACGACGTGGA
GGCCGCGCACGCCTTCGCCGAGGAGGGGCAGGTGCACCTCGCCAAGTGAG
TTTCAGCCTTGCCCTTGCGCCGAAACCGGCATTTACCACATCATTGCTGT
TTGCTGTTTGTTCGGGATAAATGGAAATAACAGAGGTGCGTGCCAGCGGG
ATTTCCAAGCCACTCAGCTGCCTGCATGTATGTGTTATCGATGGCTCTCT
TTTAGGCTTGTTTGACACTTGTTGTCTACCCGTTGCCCCCCCCCCCCCCC
GCTCCCCTTTTTTTGTGTACGCGCTTGCATCACAGGTACTACCAGATTAT
GAGCGGCAATCGCGGCATCATCATCAAGGTGTTCATCATGCTCATCATCT
TCATCTGGGTCTTCTTGGGCATAATGAGATGACACGAACGACACCACCCA
CCTGCTACTACTGCTGTACCTTTTTTCGACGGGGGGGGGGTTGGTTTGTC
CTTCTTTTTTTTGTGCCAATAGACGAATGTGGACATGGCTGATGCTGCTG
CCGCTAATTCACGAATCATGGACGTGTATAAATATGTACCACGATAGGAT
GGCGACTGCTCCGGGGGAGTCGAGAGCAGACTGTAGCTGTTGTGCCCCGG
TTGTGTGCTGGGGGCGAATGAAGACCCTTGGGAACCCATATTTTGAAGTT
CTTTGGTCCTGTCTGCAACCGAACTTCATTTGTCGCTAGTCATCTCCCTC
AAAAGTACCCCACCCACTCCTTGGTCGAAAAACGCAGAGACATTAATACA
CACAAACAATACTGACAAAGAGAGACAGAGGACAGAGAGAGAGGAAGCGA
GCAGGAATCAGGTTGAACGAAGAAGCCAAGAGAAGGTCGGACCTCTTGCA
AAACCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig88:325372..331027+

>mRNA_P-littoralis_Contig88.72.1 ID=mRNA_P-littoralis_Contig88.72.1|Name=mRNA_P-littoralis_Contig88.72.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1596bp|location=Sequence derived from alignment at P-littoralis_Contig88:325372..331027+ (Pylaiella littoralis U1_48)
ATGACCATGACGGACCGAACGGAAGAGTTCCGTGGAGCAGTCAAGGTGTT
CCGACCGACGGTTACGGTGGTCAACGACAGCGCCGAAGCAGCAGCTAGCA
GAGCTCAATCCGACCTCGGTTATCAGAAGACGTCGGAGTTTCTCCGGCTT
GCTTCCAGCGTCGCTGTCGGCTTCGAGGGCACATCAAAACTGATCGGGCG
ACTCAAGAAGCTCGTGGGGCGCAAGGGCTTTAGCAACAACCCCGCTGCCG
AGATCAGCGACGTCATGAAGCTCTTCGAGGAGGACATGGCCGGCTTGCAG
AGAGACATCGCGTTGCTGCAGAGACACGCTGACGGTAAGACTAGGGGGGG
CCCCAAGGCCAACAGCCAGCGACAGATGCACTGCTCGTTTATCGTGACGA
CGCTCCGAAAGAGCGCCCAGGAGCACACCAAGGCCTTTCGAGACGCGCTC
TTGCTTCGCGCAGCGGTGGAAAAGCAGCAAAACGAACGGCAGCGCAAGTT
CTCGCATTCCCGCGGCGTGGCCCCCGCGACCCCCCTAGACTACCCCCTCT
TCGGGAATGGTGCGACCAGCGGCACTGGGGGGGCGCGACGTCGGCCTATG
CGGGGCCCCCCGGCCTCCCCTCCGCCCCCCCCTGTTCCCGCCCCCGAGGT
CGAAGACGACGAAGACAACAAGGGGCACCATAGGAGCGTGGGAGGGGGAA
GAGGGGTGGCGGCAGCGGTAGCTTCATCGTTGCCGTTGCCGTTCCCTTCT
GGGAAGCCAGGGAGAGGGATGGGAAGGAGCGGTGGGGGGCCGATGAATGG
TGCTAGCGGCCAGAGTGCCGCTCCCTGGCCTCAGAAGCCACGGCCGCCAC
CGTGGCCGGCAGAGGGAAACACCAACATTGACAGCCGTGCCGCCGGTGGT
AGTGTAGGAGTGGCAGGAATGGGGGCGGGATATGGTGCTGAAGTGACTCC
TGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGATCACAAACGGAAACACTG
GGTCCTTGATGGGGGGGGGGAGGTTGGCCGTGCCTCTAAACAGTGCTATC
GGGGGGGTGTCGCCCGTCGCTGCGGGGAGCGGCAGCGGTAGTGGCACGTA
CGGAGGAAGGGGATATGACGCAGCACCGCCAGGAGCTCCATCGCTTCCAA
CGGAGGCATTTAGGAGCGGCCGGGGAGCCACTGGGCTGCGAAAACGACCG
GGACGAGAAGACGGGGGCGACGGGGAGGAGGAATCTCACCGGGCGGCTTG
GCAGGTGCAGGTTCAGGAGGATTCGAAGACGAGGGTGGACGAGTCACACA
AGGTGGAGAAGATGATCGGCGAGCTGGGGCAAATGTTTAGCCGGTTCTCC
TCAATGGTCGCGGCGCAAGAAGAAGTGGTGATGCACATCGAGGACGACGT
GGAGGCCGCGCACGCCTTCGCCGAGGAGGGGCAGGTGCACCTCGCCAAGT
ACTACCAGATTATGAGCGGCAATCGCGGCATCATCATCAAGGTGTTCATC
ATGCTCATCATCTTCATCTGGGTCTTCTTGCGACGGGGGGGGGGTTGGTT
TGTCCTTCTTTTTTTTGTGCCAATAGACGAATGTGGACATGGCTGA
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