mRNA_P-littoralis_Contig878.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Match: A0A6H5KZH8_9PHAE (GT8 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZH8_9PHAE) HSP 1 Score: 421 bits (1082), Expect = 2.040e-147 Identity = 199/249 (79.92%), Postives = 219/249 (87.95%), Query Frame = 1
Query: 43 MVTNDDFVIGAEVLLHSLREHCCDXXXXXXXXXXXXPLVVMVTAGVSQTKRKALQDAADEVVEVEPIAIPVQKDAGHVPSWTKVGYTKLRVWGLTQYKRVVYVDADALVMEDLDELFDREVDFAAAPDVFPPDNFNAGVMVVAPSLVVLEDMLSKVEELPSYDGGDTGFLNAYFPDWFSRPAAARLPFAYNALRTVYWTTHDKNPGYWEAIGPVKIIHFCSSPKPWEEPKRKGDLEMIWWQRYLQMKVG 789
MVT+DDFVIGAEVLLHSLREHC LVVMVT+GVSQ KR+AL+ +DEV+EVEPIA+P+++ AGHVP+W VGYTKLRVWGL Q++RVVY+DADALVM D+DELFDREVDFAAAPDVFPPD FNAGVMVV PSL+VLEDM+SKVEELPSYDGGDTGFLNAYF DWFSRPAAARLPFAYNALRTVYWTTH+KNPGYWEAIGPVKIIHFCSSPKPWEE RKGDLEM WWQR +QMK+G
Sbjct: 1 MVTSDDFVIGAEVLLHSLREHC-------GGSTRRPALVVMVTSGVSQLKRQALKVVSDEVIEVEPIAVPIKRAAGHVPAWADVGYTKLRVWGLIQFRRVVYIDADALVMVDIDELFDREVDFAAAPDVFPPDKFNAGVMVVVPSLIVLEDMMSKVEELPSYDGGDTGFLNAYFADWFSRPAAARLPFAYNALRTVYWTTHEKNPGYWEAIGPVKIIHFCSSPKPWEETNRKGDLEMTWWQRCVQMKMG 242
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Match: A0A7S2Y0F1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0F1_9STRA) HSP 1 Score: 298 bits (763), Expect = 7.450e-99 Identity = 144/252 (57.14%), Postives = 178/252 (70.63%), Query Frame = 1
Query: 31 AFVTMVTNDDFVIGAEVLLHSLREHCCDXXXXXXXXXXXXPLVVMVTAGVSQTKRKALQDAADEVVEVEPIAIPVQKDAGHVPSWTKVGYTKLRVWGLTQYKRVVYVDADALVMEDLDELFDREVDFAAAPDVFPPDNFNAGVMVVAPSLVVLEDMLSKVEELPSYDGGDTGFLNAYFPDWFSRPAAARLPFAYNALRTVYWTTHDKNPGYWEAIGPVKIIHFCSSPKPWEEPKRKGDLEMIWWQRYLQMKV 786
AFVT++TND F +G EVLL SL + +V++VT VSQ R L + + ++EPI P + HV W GY KLR+WGL +Y RVVY+DAD LVME + ELF+RE DFAAAPDVFPPD FNAGV+V+ P V EDMLSK+ LPSYDGGDTGFLNAYFPDWFS PAA+RLPFA+NA RT++W T +NPGYW+A GP KIIH+ S+PKPW+ +KG+LEMIWWQ YL+ ++
Sbjct: 2 AFVTILTNDSFKMGVEVLLFSLEQTSMQDNVD---------VVILVTPQVSQFTRNQLVRSNRRIKQIEPIENPNAE--AHVQGWVDSGYAKLRLWGLLEYSRVVYLDADCLVMEPIHELFEREADFAAAPDVFPPDKFNAGVLVLKPDQAVYEDMLSKLNALPSYDGGDTGFLNAYFPDWFSCPAASRLPFAFNAQRTLHWLTAARNPGYWQAAGPHKIIHYSSNPKPWDSGAKKGELEMIWWQYYLRSRM 242
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Match: A0A835YMF4_9STRA (Glycosyltransferase, family GT8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMF4_9STRA) HSP 1 Score: 295 bits (756), Expect = 1.380e-97 Identity = 140/261 (53.64%), Postives = 185/261 (70.88%), Query Frame = 1
Query: 19 SDHEAFVTMVTNDDFVIGAEVLLHSLREHCCDXXXXXXXXXXXXPLVVMVTAGVSQTKRKALQDAADEVVEVEPIAIPVQKDAG-HVPSWTKVGYTKLRVWGLTQYKRVVYVDADALVMEDLDELFDREVDFAAAPDVFPPDNFNAGVMVVAPSLVVLEDMLSKVEELPSYDGGDTGFLNAYFPDWFSRPAAARLPFAYNALRTVYWTTHDKNPGYW-EAIGPVKIIHFCSSPKPWEEPKRKGDLEMIWWQRYLQMKVGSM 795
S+ A+ T+VT D++ IGAEVLL SL+E + VV++T VS + R LQ EV+EV P+++ A HV W +VGYTKLR+WGL QY ++ Y+DAD LV+ ++++F R+VDFAAAPDVFPPD FNAGV++V P+ + +DM+ K+ ELPSYDGGDTGFLNAYFP+WF+ A ARLPF YNA RT+YW TH+K P YW EA+ P+KIIHFCSSPKPWE K+KGDLEM+WW +++ + +
Sbjct: 5 SERYAYATLVTTDEYAIGAEVLLQSLKEFSSNAAIHR---------VVLITPNVSTSARARLQRVGCEVLEVMPLSMASCPSASDHVSGWAEVGYTKLRIWGLVQYTKIFYIDADCLVVGAVEDVFKRDVDFAAAPDVFPPDKFNAGVLLVKPNEAIFQDMMRKIPELPSYDGGDTGFLNAYFPNWFTYAAEARLPFGYNAQRTMYWMTHEKAPAYWNEAVKPLKIIHFCSSPKPWEG-KKKGDLEMLWWAKFVTAQSSDL 255
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Match: A0A7S3NMD1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMD1_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.680e-91 Identity = 135/263 (51.33%), Postives = 180/263 (68.44%), Query Frame = 1
Query: 19 SDHEAFVTMVTNDDFVIGAEVLLHSLREHCCDXXXXXXXXXXXXPLVVMVTAGVSQTKRKALQDAADEVVEVEPIAIPVQKDAGHVPSWTKVGYTKLRVWGLTQYKRVVYVDADALVMEDLDELFDREVDFAAAPDVFPPDNFNAGVMVVAPSLVVLEDMLSKVEELPSYDGGDTGFLNAYFPDWFSRPAAARLPFAYNALRTVYWTTHDKNPGYWEAIGPVKIIHFCSSPKPWEEPKRKGDLEMIWWQRYLQMKVGSMPGMG 807
S EA+ T++T++DFV G EVLLHSL++ D L+V+VT+ + +T R+ L A + EVEPIA P ++ SW GYTKLR+W L +Y+ +VY+DADA+V+ ++DELF E FAAAPD+FPPD FNAGV+V+ P L V + M+ V ++DGGDTGFLN+YF DWFS PA ARLPF YNA RT++W TH K PGYW +I P+KI+HF SSPKPW++ K KG++E+IWWQ L ++ PG G
Sbjct: 12 STREAYATLITSEDFVDGGEVLLHSLKKTGTDRD-----------LIVVVTSDICKTSRQRLSRIAQRICEVEPIANPFERQDA---SWKGSGYTKLRLWTLVEYRCIVYIDADAVVLSNIDELFFLETHFAAAPDLFPPDKFNAGVLVLRPDLDVFQQMMETVPLAKTHDGGDTGFLNSYFHDWFSYPANARLPFRYNAQRTLFWMTHQKTPGYWNSIKPIKILHFVSSPKPWQDTKSKGEIELIWWQFALDLRS---PGGG 257
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Match: A0A2D4CD68_PYTIN (Glycosyltransferase putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD68_PYTIN) HSP 1 Score: 269 bits (688), Expect = 2.960e-87 Identity = 134/262 (51.15%), Postives = 177/262 (67.56%), Query Frame = 1
Query: 31 AFVTMVTNDDFVIGAEVLLHSLREHCCDXXXXXXXXXXXXPLVVMVTAGVS-----QTKR--KALQDAAD-EVVEVEPIAIPVQKDAG--HVPSWTKVGYTKLRVWGLTQYKRVVYVDADALVMEDLDELFDREVDFAAAPDVFPPDNFNAGVMVVAPSLVVLEDMLSKVEELPSYDGGDTGFLNAYFPDWFSRPAAARLPFAYNALRTVYWTTHDKNPGYWEAIGPVKIIHFCSSPKPWEEPKRKGDLEMIWWQRYLQMKV 786
A+VT++T+D F IG E L +SL PLVV+ T VS + +R ALQ + V I IP AG HV W GY+KL V+ L +++++VY+DAD LV+E++D+LF+RE DFAAAPDVFPPD FNAGV+VV PS V E++ +++ L SYDGGDTGFLNA+F DWF AA+RLPF YNA RT+YW +DKNPGYW+A+ P+KI+HF S+PKPW++P+RKGDLEM+WWQ Y + +
Sbjct: 4 AYVTLLTSDAFSIGVEALAYSL-----------FRTRPRYPLVVLHTPQVSAACCAKLERFFAALQSQLPISLRRVPDIGIPELTPAGSVHVAGWVNSGYSKLHVFALEEFEKIVYIDADCLVLENVDDLFERETDFAAAPDVFPPDRFNAGVLVVTPSAVRFEELHARINTLKSYDGGDTGFLNAFFRDWFCSDAASRLPFRYNAQRTMYWLVNDKNPGYWDAVQPIKILHFSSNPKPWDDPRRKGDLEMLWWQLYTESRA 254
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Match: A0A7S4N210_GUITH (Hypothetical protein n=4 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4N210_GUITH) HSP 1 Score: 268 bits (685), Expect = 1.060e-86 Identity = 129/253 (50.99%), Postives = 173/253 (68.38%), Query Frame = 1
Query: 28 EAFVTMVTNDDFVIGAEVLLHSLREHCCDXXXXXXXXXXXXPLVVMVTAGVSQTKRKALQDAADEVVEVEPIAIPVQKDAGHVPSWTKVGYTKLRVWGLTQYKRVVYVDADALVMEDLDELFDREVDFAAAPDVFPPDNFNAGVMVVAPSLVVLEDMLSKVEELPSYDGGDTGFLNAYFPDWFSRPAAARLPFAYNALRTVYWTTHDKNPGYWEAIGPVKIIHFCSSPKPWEEPKRKGDLEMIWWQRYLQMKV 786
EA++TMVT+D +++GA VL HS+ + P+ MVT VS RKAL+ A ++ VE I+ K++ + +W + GYTKL +W LT++ ++VYVDAD LVME +D+LF RE FAAAPD FPPD FNAGV+VV PSL V EDM+S++ + SYDGGDTGFLN+YF DWF+ A+RLPF YNALRT+YW T K PGYW A+G V+ +HFCS PKPW++ KG+LE WW + + ++
Sbjct: 11 EAYITMVTSDSYLMGALVLAHSILK--------TQDKSNQRPICCMVTDEVSADSRKALEQAGLRIIMVESIS---SKESSGIDAWDQSGYTKLNIWKLTEFSKLVYVDADCLVMESIDDLFSRETRFAAAPDTFPPDRFNAGVLVVEPSLEVFEDMISRIGVMHSYDGGDTGFLNSYFHDWFTMGEASRLPFRYNALRTMYWLT-QKKPGYWNAVGAVRCLHFCSFPKPWDQAP-KGELEQKWWVAFAECQL 250
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Match: W7TND6_9STRA (Unidentified vitellogenin-linked transcript family member (Uvt-5) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TND6_9STRA) HSP 1 Score: 268 bits (684), Expect = 5.340e-86 Identity = 140/282 (49.65%), Postives = 182/282 (64.54%), Query Frame = 1
Query: 31 AFVTMVTNDDFVIGAEVLLHSLREHCCDXXXXXXXXXXXXPLVVMVTAGVSQTKRKALQDAADEVVEVEPIAIPVQKDAGHVPSWTKVGYTKLRVWGLTQYKRVVYVDADALVMEDLDELFDREVDFAAAPDVFPPDNFNAGVMVVAPSLVVLEDMLSKVEE--LPSYDGGDTGFLNAYFPDWFSRP-----------------------AAARLPFAYNALRTVYWTTHDKNPGYWEAIGP-VKIIHFCSSPKPWEEP--KRKGDLEMIWWQRYLQMKVGS 792
AFVT++T D F GA+VLLHSLR +VV+VT +S+ RK L+ DE++ VEPIA P +++ HV W G+TKL++WGLTQ++RVVY+DAD LV+ED+ ELF +VDFAAAPD+FPPD FNAGVM+V P+L V EDML V+ LPSYDGGDTGFLNA+FP W+S P + ARLPF +NA RT++W TH PGYW A+ VKI+HF SSPKPWE ++KG+LE+ WW +++M +
Sbjct: 25 AFVTLLTTDSFGPGAQVLLHSLRT---SISAKDKDVAIRPVVVVLVTPEISERTRKGLEGFCDELLTVEPIANPYAENS-HVSGWVDSGFTKLQIWGLTQFERVVYLDADCLVVEDIQELFSADVDFAAAPDIFPPDRFNAGVMLVRPNLDVYEDMLRAVKAGALPSYDGGDTGFLNAFFPKWYSSPLVRTGSTSSSFSTCGGNTMPQKVSMARLPFIWNAQRTLHWMTHAVAPGYWGAVATRVKILHFSSSPKPWEPEGVRKKGELEVKWWTTFVEMHMAK 302
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Match: K3WC47_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC47_GLOUD) HSP 1 Score: 266 bits (679), Expect = 8.630e-86 Identity = 127/269 (47.21%), Postives = 176/269 (65.43%), Query Frame = 1
Query: 31 AFVTMVTNDDFVIGAEVLLHSLREHCCDXXXXXXXXXXXXPLVVMVTAGVSQ-TKRKALQDAAD--------EVVEVEPIAIP---VQKDAGHVPSWTKVGYTKLRVWGLTQYKRVVYVDADALVMEDLDELFDREVDFAAAPDVFPPDNFNAGVMVVAPSLVVLEDMLSKVEELPSYDGGDTGFLNAYFPDWFSRPAAARLPFAYNALRTVYWTTHDKNPGYWEAIGPVKIIHFCSSPKPWEEPKRKGDLEMIWWQRYLQMKVGSMPG 801
A+ T++T+D +V+G E L++SL + PLVV+ ++ V+Q T K + A V I IP + HVP W GYTKL ++ + ++++VY+DADA+V++++DELFDR FAAAPDVFPPD FNAGV+V+ P+ + D+L+K +EL SYDGGDTGFLNA+FP WF AA+RLPF YNA RT+YW + KNPGYW A+ P+KI+H+ S+PKPWE+P RKGDLE++WWQ Y + + S G
Sbjct: 9 AYATLITSDAYVMGVEALVYSLFK-----------ARVAFPLVVLHSSQVTQPTVAKLTRFCAPFQSSTWRISFRSVPDIGIPDEVTDRSTVHVPGWVNSGYTKLHIFAMDDFEQIVYIDADAIVLQNVDELFDRSTSFAAAPDVFPPDRFNAGVLVIRPNKQLFADLLAKAKELKSYDGGDTGFLNAFFPKWFESDAASRLPFGYNAQRTMYWLVNGKNPGYWNAVQPLKILHYSSNPKPWEDPSRKGDLEILWWQMYTESRCMSFLG 266
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Match: A0A485KJZ5_9STRA (Aste57867_8336 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJZ5_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.730e-84 Identity = 122/253 (48.22%), Postives = 170/253 (67.19%), Query Frame = 1
Query: 34 FVTMVTNDDFVIGAEVLLHSLREHCCDXXXXXXXXXXXXPLVVMVTAGVSQTKRKALQDAADEVVEVEPI-AIPVQKDAGHVPSWTKVGYTKLRVWGLTQYKRVVYVDADALVMEDLDELFDREV---DFAAAPDVFPPDNFNAGVMVVAPSLVVLEDMLSKVEELPSYDGGDTGFLNAYFPDWFSRPAAARLPFAYNALRTVYWTTHDKNPGYWEAIGPVKIIHFCSSPKPWEEPKRKGDLEMIWWQRYLQM 780
+ T+VT+D+FVIG EVL +SLR++ PL+V+ T +S + LQ + A+P HVP W GYTKL V+ L ++ +V Y+D+DA V+ ++D++F+R++ FAAAPD+FPPD FNAGV++V PS + D++ ++ LPSYDGGDTG+LNA+FPDWF+ + ARLPFAYNA RT++W THD PGYW+A+G VKI+H SSPKPWE P +KG+LEM+WW Y +M
Sbjct: 7 YATLVTSDEFVIGVEVLAYSLRKY-----------GAKFPLLVLYTDQLSAHGVQKLQRIDPATTTPRRVDALPNPNVEVHVPGWVNSGYTKLHVFNLVEFAKVFYIDSDAFVLANVDDMFERDIAPYPFAAAPDIFPPDRFNAGVLLVQPSAALFRDLMDQIALLPSYDGGDTGYLNAFFPDWFTSDSRARLPFAYNAQRTMHWLTHDTKPGYWDAVGRVKILHCSSSPKPWENPAKKGELEMLWWHYYTEM 248
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Match: F0WEL0_9STRA (Glycosyltransferase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WEL0_9STRA) HSP 1 Score: 261 bits (666), Expect = 5.990e-84 Identity = 123/264 (46.59%), Postives = 170/264 (64.39%), Query Frame = 1
Query: 28 EAFVTMVTNDDFVIGAEVLLHSLREHCCDXXXXXXXXXXXXPLVVMVTAGVSQTKRKALQDAADEV--------VEVEPIAIPVQKD---AGHVPSWTKVGYTKLRVWGLTQYKRVVYVDADALVMEDLDELFDREVDFAAAPDVFPPDNFNAGVMVVAPSLVVLEDMLSKVEELPSYDGGDTGFLNAYFPDWFSRPAAARLPFAYNALRTVYWTTHDKNPGYWEAIGPVKIIHFCSSPKPWEEPKRKGDLEMIWWQRYLQMKV 786
+A+ TM+T+DDF +G E LL+S +++ T+ VS+ L + + + V+ I IP + HV SW YTKL ++GL +Y+++VY+DADAL++ ++DELF+ + FAAAPD+FPPD FNAGV+V+ P V E++L+K + + SYDGGDTGFLN F DWF R AA+RLPF YNA RT+YW + KNPGYW+A+ P+KI+HF SSPKPWEEP R GDLEMIWW Y + ++
Sbjct: 2 QAYATMITSDDFQMGVEALLYS-----------WSCTHSSINFLILYTSQVSKRVLDKLHRFLETLRMSERIKWMRVDSIPIPASSSDPPSSHVESWLNSAYTKLNIFGLEEYQKIVYIDADALILTNIDELFEMDTSFAAAPDIFPPDRFNAGVLVIKPGKDVFENLLAKAKTIKSYDGGDTGFLNLVFSDWFQRDAASRLPFRYNAQRTMYWMVNSKNPGYWKAVEPLKILHFSSSPKPWEEPNRIGDLEMIWWMYYTKAQI 254 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig878.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig878.2.1 >prot_P-littoralis_Contig878.2.1 ID=prot_P-littoralis_Contig878.2.1|Name=mRNA_P-littoralis_Contig878.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=272bp GHETRPSDHEAFVTMVTNDDFVIGAEVLLHSLREHCCDNSSSSSSKTRRRback to top mRNA from alignment at P-littoralis_Contig878:2212..4988- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig878.2.1 ID=mRNA_P-littoralis_Contig878.2.1|Name=mRNA_P-littoralis_Contig878.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2777bp|location=Sequence derived from alignment at P-littoralis_Contig878:2212..4988- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig878:2212..4988- >mRNA_P-littoralis_Contig878.2.1 ID=mRNA_P-littoralis_Contig878.2.1|Name=mRNA_P-littoralis_Contig878.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=816bp|location=Sequence derived from alignment at P-littoralis_Contig878:2212..4988- (Pylaiella littoralis U1_48)back to top |