prot_P-littoralis_Contig878.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig878.1.1
Unique Nameprot_P-littoralis_Contig878.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length138
Homology
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Match: D7FV92_ECTSI (Spindle pole body component n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV92_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 1.000e-68
Identity = 119/137 (86.86%), Postives = 126/137 (91.97%), Query Frame = 0
Query:    1 MLRARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFLATLRAKFYIDNLEISQGLGRALRHVLRFCCLFALHGDVKDIPPLEVTALRNTFQDEMKLLVPVLEKLAKELMMRLDFNGHFSAEALY 137
            MLRARMAFFVSNLAFYLQVDVVEAAY LL+SKL  VRDFVSLQRAHQEFLATLRAKFY+DNL I+QGLGRALRHVLRFCCLF+LHGD KDI   EV AL + FQDEMKLLVPVLEK+AKELMMRLDFNGHFSAEAL+
Sbjct:  930 MLRARMAFFVSNLAFYLQVDVVEAAYTLLRSKLVTVRDFVSLQRAHQEFLATLRAKFYVDNLAIAQGLGRALRHVLRFCCLFSLHGDAKDILHSEVIALHDAFQDEMKLLVPVLEKVAKELMMRLDFNGHFSAEALH 1066          
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Match: T2M448_HYDVU (Gamma-tubulin complex component (Fragment) n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2M448_HYDVU)

HSP 1 Score: 78.2 bits (191), Expect = 3.010e-14
Identity = 49/144 (34.03%), Postives = 80/144 (55.56%), Query Frame = 0
Query:    2 LRARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFLATLRAKFYIDNLEISQGLGRALRHVLRFCCLFALHGDVKDIPPLEVTALRNT--FQDEMKLLVPVLEKLAK--------ELMMRLDFNGHFSAEA 135
            LR+RMAFFV N  +YLQVDV+E+ + LL  K+  +RDF S+ ++H  FL T+  + +I    +   L   L   ++FC L + + D  D   LE TA + T  F  +  +L  +L  +          +L++R+DFN +F+ ++
Sbjct:  267 LRSRMAFFVDNFQYYLQVDVLESQFSLLLEKIKKLRDFESIHKSHDSFLITMLQQSFISMKPVLSILQHVLEICMKFCELVSFNRDSDD--DLE-TAQQYTQDFDRQTSVLFKILSSVRSHQTSPHLAQLLLRIDFNKYFTRKS 407          
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Match: A0A8B6XWI3_HYDVU (Gamma-tubulin complex component n=2 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B6XWI3_HYDVU)

HSP 1 Score: 78.2 bits (191), Expect = 3.710e-14
Identity = 49/144 (34.03%), Postives = 80/144 (55.56%), Query Frame = 0
Query:    2 LRARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFLATLRAKFYIDNLEISQGLGRALRHVLRFCCLFALHGDVKDIPPLEVTALRNT--FQDEMKLLVPVLEKLAK--------ELMMRLDFNGHFSAEA 135
            LR+RMAFFV N  +YLQVDV+E+ + LL  K+  +RDF S+ ++H  FL T+  + +I    +   L   L   ++FC L + + D  D   LE TA + T  F  +  +L  +L  +          +L++R+DFN +F+ ++
Sbjct:  475 LRSRMAFFVDNFQYYLQVDVLESQFSLLLEKIKKLRDFESIHKSHDSFLITMLQQSFISMKPVLSILQHVLEICMKFCELVSFNRDSDD--DLE-TAQQYTQDFDRQTSVLFKILSSVRSHQTSPHLAQLLLRIDFNKYFTRKS 615          
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Match: A0A7S3USH3_HETAK (Spindle pole body component (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USH3_HETAK)

HSP 1 Score: 72.8 bits (177), Expect = 4.640e-14
Identity = 35/71 (49.30%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    2 LRARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFLATLRAKFYIDNLEISQGLGRAL 72
            LRA MAFFV NL +YLQVDV+EA + +L   +   +DF S+++AH  ++ TLR+K Y+D   +   LGRAL
Sbjct:   14 LRAAMAFFVQNLLYYLQVDVIEAQFTILMDSIEKAKDFNSVRKAHSLYIQTLRSKCYLDVAAVRGALGRAL 84          
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Match: A0A2R5GLN9_9STRA (Gamma-tubulin complex component 4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLN9_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.900e-13
Identity = 46/144 (31.94%), Postives = 73/144 (50.69%), Query Frame = 0
Query:    2 LRARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFLATLRAKFYIDNLEISQGLGRALRHVLRFCCLF-------ALHGDVKDIPPLEVTALRNTFQD-------EMKLLVPVLEKLAKELMMRLDFNGHF 131
            LR+ MA++V+NL ++LQVDVV+AA+K L  ++    DF  +++AH +F+ T     ++ N  + + +   LR  LRFC L        A   D       +   L   F D       + K L  +L  L   +++R+DFNG F
Sbjct: 1371 LRSSMAYWVNNLQYHLQVDVVDAAHKTLLDEIRNASDFKFVEQAHDKFVETFITGAFLHNKTVRETIDHVLRRCLRFCSLVERFARLDAASADGASADAQKYEDLDKAFNDLAKAYARDAKFLYQMLLSLNSNMLLRIDFNGFF 1514          
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Match: D8QRE9_SELML (Gamma-tubulin complex component n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QRE9_SELML)

HSP 1 Score: 75.5 bits (184), Expect = 3.310e-13
Identity = 43/144 (29.86%), Postives = 76/144 (52.78%), Query Frame = 0
Query:    2 LRARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFLATLRAKFYIDNLEISQGLGRALRHVLRFCCLFALHGDVKDIPPLEVTALRNTFQDEMKLLVPVLE--KLA--------KELMMRLDFNGHFSAEA 135
            LR  MA+ ++NL FY+QVDV+E+ + LLQ ++ A +DF  L R HQE+L+ L ++ ++D   +S+ L   ++  L+ C +             E+  +   F  +   L  +L   KLA        ++ ++RL++N  F + A
Sbjct:  559 LRQHMAYLITNLQFYIQVDVIESQWNLLQERVQASKDFTELARFHQEYLSALISQSFLDIGSVSRILDSIIKLCLQLCRIMEHQDATSSSTAAELDQITEEFNKKSNSLYTILRSSKLAGSQRAPFLRQFLLRLNYNSFFESTA 702          
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Match: A0A388JRY8_CHABU (Gamma-tubulin complex component n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JRY8_CHABU)

HSP 1 Score: 73.6 bits (179), Expect = 3.610e-13
Identity = 45/144 (31.25%), Postives = 76/144 (52.78%), Query Frame = 0
Query:    2 LRARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFLATLRAKFYIDNLEISQGLGRALRHVLRFCCLFALHGDVKDIPPLEVTALRNTFQDEMKLLVPVLE--KLA--------KELMMRLDFNGHFSAEA 135
            LR  M + ++NL FY+QVDV+E+  KLLQ ++ A +DF  L R HQE+L+ L  + ++D   IS+ L   ++   + C L        D    E+ +L   F+     L  +L   KL+        ++ ++RL++N +F  +A
Sbjct:   63 LRQHMTYLITNLQFYIQVDVIESQSKLLQERIEASKDFTELTRFHQEYLSALITQSFLDTGSISRILDLIIKLCWQLCKLIEASDATPDTA--EIESLAKLFRQRSISLFTILSSSKLSGSQRAPFLRQFLLRLNYNNYFHNQA 204          
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Match: UPI00158CF626 (gamma-tubulin complex component 4 isoform X1 n=2 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158CF626)

HSP 1 Score: 74.7 bits (182), Expect = 6.060e-13
Identity = 44/149 (29.53%), Postives = 79/149 (53.02%), Query Frame = 0
Query:    2 LRARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFLATLRAKFYIDNL--EISQGLGRALRHVLRFCCLFALHGDVKDIPPL------EVTALRNTFQDEMKLLVPVLEKLAKE--------LMMRLDFNGHFSAE 134
            LR  + F + NL +YLQVDV+E+ Y ++++++    +F  +Q AH  FLA + ++ ++ N   +    +   +R +LR C  F LH  + ++  L      E+  L +T    M+LL+  L ++  +        L++RLDFN  FS +
Sbjct:  496 LRNHLIFILDNLQYYLQVDVLESQYTIMENRVKNTENFEDVQIAHSTFLANILSQTFLTNTSGKSKNPVNNLIRLLLRLCDDFILHASIWEVTHLLSTEKEELKTLTDTLSSVMELLIKTLNRVRAQPSGAHLAQLLLRLDFNRWFSKQ 644          
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Match: W1NYA3_AMBTC (Gamma-tubulin complex component n=2 Tax=Amborella trichopoda TaxID=13333 RepID=W1NYA3_AMBTC)

HSP 1 Score: 73.6 bits (179), Expect = 1.560e-12
Identity = 44/143 (30.77%), Postives = 77/143 (53.85%), Query Frame = 0
Query:    3 RARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFLATLRAKFYIDNLEISQGLGRALRHVLRFCCLFALHGDVKDIPPLEVTALRNTFQDEMKLLVPVLE--KLA--------KELMMRLDFNGHFSAEA 135
            R  MAF ++NL FY+QVDV+E+ + LLQ ++ A  DF  L   HQE+L+ L ++ ++D   +S+ L   ++  L+FC  +++         L++  +   F  +   L  +L   K+A        ++ ++RL+FN  F A A
Sbjct:  590 RGHMAFLITNLQFYIQVDVIESQWNLLQERVQASHDFTELVGFHQEYLSALISQSFLDIGSVSRILDSIMKLCLQFC--WSIERQETSPTTLDLEHISEEFNKKSNSLYTILRSSKIAGSQRAPFLRQFLLRLNFNSFFEATA 730          
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Match: A0A2Z7AVJ4_9LAMI (Gamma-tubulin complex component n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AVJ4_9LAMI)

HSP 1 Score: 73.6 bits (179), Expect = 1.570e-12
Identity = 45/143 (31.47%), Postives = 72/143 (50.35%), Query Frame = 0
Query:    3 RARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFLATLRAKFYIDNLEISQGLGRALRHVLRFCCLFALHGDVKDIPPLEVTALRNTFQDEMKLLVPVLEK----------LAKELMMRLDFNGHFSAEA 135
            R  MAF + NL FY+QVDVVE+ + +LQ+ + + RDF  L   HQE+L+ L ++ ++D   +S+ L   ++  L+FC     H + +    LE  A    F  +   L  +L              +  ++RL+FN  F A A
Sbjct:  628 REHMAFLIRNLQFYIQVDVVESQWNVLQAHIQSSRDFTELVGHHQEYLSALISQSFLDIGSVSRILDGIMKVCLQFCWKLETHENNESTAELEYIA--EEFNKKSNSLYTILRSSRIAGSQRAPFLRRFLLRLNFNSFFEATA 768          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig878.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV92_ECTSI1.000e-6886.86Spindle pole body component n=2 Tax=Ectocarpus Tax... [more]
T2M448_HYDVU3.010e-1434.03Gamma-tubulin complex component (Fragment) n=1 Tax... [more]
A0A8B6XWI3_HYDVU3.710e-1434.03Gamma-tubulin complex component n=2 Tax=Hydra vulg... [more]
A0A7S3USH3_HETAK4.640e-1449.30Spindle pole body component (Fragment) n=1 Tax=Het... [more]
A0A2R5GLN9_9STRA1.900e-1331.94Gamma-tubulin complex component 4 n=1 Tax=Hondaea ... [more]
D8QRE9_SELML3.310e-1329.86Gamma-tubulin complex component n=4 Tax=Selaginell... [more]
A0A388JRY8_CHABU3.610e-1331.25Gamma-tubulin complex component n=1 Tax=Chara brau... [more]
UPI00158CF6266.060e-1329.53gamma-tubulin complex component 4 isoform X1 n=2 T... [more]
W1NYA3_AMBTC1.560e-1230.77Gamma-tubulin complex component n=2 Tax=Amborella ... [more]
A0A2Z7AVJ4_9LAMI1.570e-1231.47Gamma-tubulin complex component n=1 Tax=Dorcoceras... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042241Gamma-tubulin complex component, C-terminal domain superfamilyGENE3D1.20.120.1900coord: 1..130
e-value: 1.3E-23
score: 85.6
IPR040457Gamma tubulin complex component, C-terminalPFAMPF04130GCP_C_terminalcoord: 2..131
e-value: 1.0E-16
score: 61.2
IPR007259Gamma-tubulin complex component proteinPANTHERPTHR19302GAMMA TUBULIN COMPLEX PROTEINcoord: 3..134
NoneNo IPR availablePANTHERPTHR19302:SF27GAMMA-TUBULIN COMPLEX COMPONENT 4coord: 3..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig878contigP-littoralis_Contig878:26..1472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig878.1.1mRNA_P-littoralis_Contig878.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig878 5..1472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig878.1.1 ID=prot_P-littoralis_Contig878.1.1|Name=mRNA_P-littoralis_Contig878.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=138bp
MLRARMAFFVSNLAFYLQVDVVEAAYKLLQSKLGAVRDFVSLQRAHQEFL
ATLRAKFYIDNLEISQGLGRALRHVLRFCCLFALHGDVKDIPPLEVTALR
NTFQDEMKLLVPVLEKLAKELMMRLDFNGHFSAEALY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042241GCP_C_sf
IPR040457GCP_C
IPR007259GCP