mRNA_P-littoralis_Contig874.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Match: A0A6H5L680_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L680_9PHAE) HSP 1 Score: 101 bits (252), Expect = 4.340e-23 Identity = 63/122 (51.64%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 112 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPV 477
G +Y+VADL+ M+ ED E A GGS+ +G++ S GG XXXXX T ERKGPHCMMRLVGIL ED +RPL+++SRLQA R +LD SA G R+ +W ++RF DP + V V
Sbjct: 16 GVDYSVADLYNAMEKEDQTELADSAGGSAPTGSS-STGGAVGPDGXXXXXGSGSNT-ERKGPHCMMRLVGILCEDSIRPLVMNSRLQATRQELDTSAGGPRNNLWTEVTDRFRDPGYHVRKV 135
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Match: D7FSJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ6_ECTSI) HSP 1 Score: 102 bits (255), Expect = 8.340e-23 Identity = 71/123 (57.72%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 112 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGT-AERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPV 477
G +Y+ ADL+ MD ED E G + S TGS XXXXXXXXXXXXX G+ ERKGPHCMMRLVGIL ED +RPLLIDSR QA R +LD S VG R+++W ++RF DPDH+V +
Sbjct: 91 GVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKI 213
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Match: A0A6H5K6G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6G9_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 4.720e-20 Identity = 67/120 (55.83%), Postives = 80/120 (66.67%), Query Frame = 1
Query: 118 EYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPV 477
EY+ ADLF + ED A GGS+ +G GS XXXXXXXXXXXX ER GPHCMMRLVGIL ED +RPLL +SRLQA R LD S+VG R+++W + RF DPDH+V +
Sbjct: 291 EYSAADLFDALAEEDEAATADSAGGSAPTG--GSSXXXXXXXXXXXXXXXSGSNTERNGPHCMMRLVGILCEDVIRPLLTESRLQATRQDLDTSSVGPRNDLWTEVTARFRDPDHQVRKI 408
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Match: A0A6H5KTC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC6_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 1.350e-19 Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 1
Query: 280 AERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEV 468
AERKGPHCMMRLVGIL ED +RPLLI+SRLQA R L S+VG R+++W + RF DPDH+V
Sbjct: 90 AERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLHTSSVGPRNDMWTEVTTRFRDPDHQV 152
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Match: D8LJH4_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH4_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 4.380e-19 Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPV 477
ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+E+W + RF DPDH+V +
Sbjct: 299 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKI 363
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 6.320e-19 Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPV 477
ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+E+W + RF DPDH+V +
Sbjct: 176 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKI 240
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 9.600e-19 Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPV 477
ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+E+W + RF DPDH+V +
Sbjct: 299 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKI 363
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Match: A0A6H5K7K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K9_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 2.120e-18 Identity = 44/69 (63.77%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTP-VEGE 486
ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H V V+GE
Sbjct: 208 ERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDGE 276
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 3.010e-18 Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 283 ERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPV 477
ERKGPHCMMRLVGIL ED +RPLLI+SRLQA R LD S+VG R+++W + RF DPDH+V +
Sbjct: 411 ERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQVRKI 475
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 6.850e-18 Identity = 64/122 (52.46%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 112 GREYNVADLFAIMDAEDAVEAAAEGGGSSESGATGSCGGTXXXXXXXXXXXXXXGTAERKGPHCMMRLVGILVEDDVRPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFTDPDHEVTPV 477
G +Y+VADL+ M+ ED E +S XXXXXXXXXXXX ERKGPHCMMRLVGIL ED +RPL+I+SRLQA R +LD SAVG R +W ++RF DP H V +
Sbjct: 23 GVDYSVADLYDAMEKEDKPEL-------EDSAGXXXXXXXXXXXXXXXXXXXSGNITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNVRKI 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig874.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig874.7.1 >prot_P-littoralis_Contig874.7.1 ID=prot_P-littoralis_Contig874.7.1|Name=mRNA_P-littoralis_Contig874.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=119bp MDAEDAVEAAAEGGGSSESGATGSCGGTAAGAGGGGAAGAGVGTAERKGPback to top mRNA from alignment at P-littoralis_Contig874:20757..21429- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig874.7.1 ID=mRNA_P-littoralis_Contig874.7.1|Name=mRNA_P-littoralis_Contig874.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=673bp|location=Sequence derived from alignment at P-littoralis_Contig874:20757..21429- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig874:20757..21429- >mRNA_P-littoralis_Contig874.7.1 ID=mRNA_P-littoralis_Contig874.7.1|Name=mRNA_P-littoralis_Contig874.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=357bp|location=Sequence derived from alignment at P-littoralis_Contig874:20757..21429- (Pylaiella littoralis U1_48)back to top |