mRNA_P-littoralis_Contig874.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Match: A0A6H5JXZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ6_9PHAE) HSP 1 Score: 183 bits (465), Expect = 5.530e-54 Identity = 94/145 (64.83%), Postives = 114/145 (78.62%), Query Frame = 1
Query: 1 NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 435
N+I QPNISAEK++KMW+ KAKWN P ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAERRA+AKREG RL+ NR G K+ KK R QSVA+AT A+ +A+ + PLL
Sbjct: 115 NIIQQPNISAEKITKMWSAAKAKWNTPIANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQ-KKQGRRQSVAEATSVAMKTALLDIEPLL 258
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI) HSP 1 Score: 178 bits (451), Expect = 4.640e-51 Identity = 93/145 (64.14%), Postives = 112/145 (77.24%), Query Frame = 1
Query: 1 NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 435
N+I QPNISAEKLS+MWA KAKWNQP+A+W+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDDGTG GGA+RRA+AKREG RLH NR GKK+ K QSVA+AT A+ +AI M PLL
Sbjct: 252 NIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVGTGGADRRAAAKREGARLHEQNRRGKKQKNKGV-GQSVAEATSAAMKTAIKDMEPLL 395
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE) HSP 1 Score: 178 bits (451), Expect = 2.020e-50 Identity = 92/145 (63.45%), Postives = 113/145 (77.93%), Query Frame = 1
Query: 1 NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 435
N+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAER A+AKREG RL+ NR G + KK R QSVA+AT A+ +A+ + PLL
Sbjct: 279 NIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGDGNGCTGGAERLAAAKREGARLYEQNRRGTMQKKKGGR-QSVAEATSVAMKTALLEVEPLL 422
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE) HSP 1 Score: 176 bits (446), Expect = 1.270e-49 Identity = 91/145 (62.76%), Postives = 111/145 (76.55%), Query Frame = 1
Query: 1 NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 435
N+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LP D QREDDGTG G GGAERRASAKREG RL NR G K+ KK Q+VA+AT A+ +A+ + PLL
Sbjct: 273 NIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQNVAEATSVAMKTALLDIEPLL 416
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE) HSP 1 Score: 174 bits (440), Expect = 6.380e-48 Identity = 91/145 (62.76%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 1 NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 435
N+I QPNISAEK++KMW+ KAKWN P+ANW+ SGNNQPW++F QGD+D +++G AI+KYPELDQVCN LP D QREDDGTG G GGAERRASAKREG RL NR G K+ KK QSVA+AT A+ +A+ + PLL
Sbjct: 435 NIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQGDTDTYILGCAIEKYPELDQVCNNPLPVDAQREDDGTGEGDGCTGGAERRASAKREGARLDEQNRRGTKQKKKGG-GQSVAEATSVAMKTALLDIEPLL 578
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE) HSP 1 Score: 173 bits (439), Expect = 2.350e-47 Identity = 91/145 (62.76%), Postives = 111/145 (76.55%), Query Frame = 1
Query: 1 NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 435
N+I QPNISAEKLS+MWA KAKWNQP+ANW+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDDGTG GGA+RRA+AKREG RL+ NR GKK K QSVA+AT A+ +A+ + PLL
Sbjct: 487 NIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDGTGEGIVCTGGADRRAAAKREGARLNEQNRRGKKPKNKGV-GQSVAEATSAAMKTALKDIEPLL 630
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI) HSP 1 Score: 163 bits (413), Expect = 1.010e-44 Identity = 79/115 (68.70%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 1 NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKK 345
N+I QPNISAEKLS+MWA KAKWNQP+ANW+ SGNNQPW++FCQG +D +++G AI+KYPEL+QVCN LLPE QREDD TG GGA+RRA+AKREG RLH NR GKK
Sbjct: 375 NIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQGCTDTYVLGCAIEKYPELNQVCNNLLPEGAQREDDWTGEGIVGTGGADRRAAAKREGARLHEQNRRGKK 489
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Match: A0A6H5KNM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNM0_9PHAE) HSP 1 Score: 165 bits (418), Expect = 5.020e-44 Identity = 86/135 (63.70%), Postives = 107/135 (79.26%), Query Frame = 1
Query: 1 NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGT-SGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAV 402
N+I QP+I AEK++K W+ KAKWN P+ANW+ + SGNNQPW++FCQGD+D +++G AI+KYPELDQVCN LLPED QREDDGTG G GGAERRA+AKREG RL+ NR G K+ K+ R QSVA+AT A+
Sbjct: 809 NIIQQPDIFAEKITKTWSAAKAKWNTPNANWKKSESGNNQPWLSFCQGDTDTYILGCAIEKYPELDQVCNNLLPEDAQREDDGTGEGDGCTGGAERRAAAKREGARLYEQNRRGTKQKKEGGR-QSVAEATSVAM 942
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Match: A0A6H5JSN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN7_9PHAE) HSP 1 Score: 146 bits (369), Expect = 9.870e-38 Identity = 78/145 (53.79%), Postives = 97/145 (66.90%), Query Frame = 1
Query: 1 NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 435
N+I QPN SAEK++ W+ +A WN P+ANW SGNNQPWV+F QGD+D +++G A +KYPELDQVCN LLPED QREDDGTG GGAERR +AKREG RL N +SVA+A A+ +A+ + PLL
Sbjct: 410 NIIQQPNRSAEKITNTWSAARANWNTPYANWTSESGNNQPWVSFSQGDTDTYILGCAFEKYPELDQVCNNLLPEDAQREDDGTGEGDACTGGAERRTAAKREGARLDEQNXXXXXXXXXXX-GKSVAEAMSVAMKTALLDIEPLL 553
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Match: A0A6H5KQ52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ52_9PHAE) HSP 1 Score: 140 bits (354), Expect = 3.070e-37 Identity = 75/145 (51.72%), Postives = 96/145 (66.21%), Query Frame = 1
Query: 1 NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDIFLVGEAIKKYPELDQVCNALLPEDVQREDDGTGAAAGEAGGAERRASAKREGERLHGMNRAGKKKAKKDERAQSVADATEKAVSSAIAGMAPLL 435
N+I QPNISAEK++ M + KAKWN P+ANW+ GNNQPW++FCQGD+D +++G A++KYPELDQVCN LLPED QREDD TG G + NR G K+ KK R QSVA+AT A+ +A+ + PLL
Sbjct: 149 NIIQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTYILGCAVEKYPELDQVCNNLLPEDAQREDDRTGEGDG--------------WREAYEQNRRGTKQKKKGGR-QSVAEATSVAMKTALLDIEPLL 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig874.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig874.5.1 >prot_P-littoralis_Contig874.5.1 ID=prot_P-littoralis_Contig874.5.1|Name=mRNA_P-littoralis_Contig874.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=181bp NVIHQPNISAEKLSKMWAGVKAKWNQPHANWRGTSGNNQPWVNFCQGDSDback to top mRNA from alignment at P-littoralis_Contig874:18887..20657- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig874.5.1 ID=mRNA_P-littoralis_Contig874.5.1|Name=mRNA_P-littoralis_Contig874.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1771bp|location=Sequence derived from alignment at P-littoralis_Contig874:18887..20657- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig874:18887..20657- >mRNA_P-littoralis_Contig874.5.1 ID=mRNA_P-littoralis_Contig874.5.1|Name=mRNA_P-littoralis_Contig874.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=543bp|location=Sequence derived from alignment at P-littoralis_Contig874:18887..20657- (Pylaiella littoralis U1_48)back to top |