mRNA_P-littoralis_Contig871.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Match: A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE) HSP 1 Score: 165 bits (418), Expect = 1.410e-49 Identity = 78/97 (80.41%), Postives = 82/97 (84.54%), Query Frame = 1
Query: 28 QLDTRHVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPTRF 318
+LDTR VLPWW+ TGRKMF YLAPVAQQV GNQA AAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KDIP IA KDIR CLP RF
Sbjct: 99 ELDTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRF 195
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 160 bits (405), Expect = 1.350e-48 Identity = 73/97 (75.26%), Postives = 80/97 (82.47%), Query Frame = 1
Query: 28 QLDTRHVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPTRF 318
+LDTR +LPWW+QTGRK F YLAPVAQQVFGNQA AAQVERDFS C NLL NRSR+DTYWVEM+MFL N++HIP KDIP IA KDI CLP RF
Sbjct: 24 ELDTREILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRF 120
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 162 bits (409), Expect = 9.720e-45 Identity = 77/97 (79.38%), Postives = 81/97 (83.51%), Query Frame = 1
Query: 28 QLDTRHVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPTRF 318
+LDTR VLPWW+ TGRKMF LAPVAQQV GNQA AAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KDIP IA KDIR CLP RF
Sbjct: 497 ELDTREVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRF 593
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE) HSP 1 Score: 143 bits (361), Expect = 6.040e-40 Identity = 65/97 (67.01%), Postives = 78/97 (80.41%), Query Frame = 1
Query: 28 QLDTRHVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPTRF 318
+LD R VLPWW++TG+ +F +LAPVAQQVFGNQAA +QVERDFS G LL NRSR+DTYWVE++MFL N+ HIP LK IP +A K+IR CLP RF
Sbjct: 186 ELDCREVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPARF 282
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Match: A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE) HSP 1 Score: 134 bits (336), Expect = 1.260e-38 Identity = 65/80 (81.25%), Postives = 67/80 (83.75%), Query Frame = 1
Query: 79 MFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPTRF 318
MF YLAPVAQQV GNQA AAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KDIP IA KDIR CLP RF
Sbjct: 1 MFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRF 80
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Match: A0A6H5KBM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM2_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.930e-29 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 61 QQTGRKM--FAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPTRF 318
QQ +++ F L A +V GNQA AAQVERDFS+C NLL NRSRIDTYWVEM+MFL VNYK IPA KDIP IA KDIR CLP RF
Sbjct: 209 QQVSQELERFQALYMTAGEVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKCIPAFKDIPMIAAKDIRTCLPPRF 296
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 115 bits (288), Expect = 9.900e-28 Identity = 55/98 (56.12%), Postives = 66/98 (67.35%), Query Frame = 1
Query: 25 SQLDTRHVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPTRF 318
+ L VL +W TGR F L VAQQ FG+Q +AA VERDFS CG LV NRSR++ YWVEM+MFL N+K IP +IP I KDIR+CLP +F
Sbjct: 725 NDLHPTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKF 822
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 115 bits (287), Expect = 1.130e-27 Identity = 54/96 (56.25%), Postives = 68/96 (70.83%), Query Frame = 1
Query: 31 LDTRHVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPTRF 318
L VL +W + G++MF L VAQQ FG+QA+AAQ+ERDFS CG GNRSR + YW+EM+M LK NY+ IP KDIP I KDIR+CLP ++
Sbjct: 487 LPPSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKY 582
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 110 bits (275), Expect = 3.490e-26 Identity = 54/98 (55.10%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 25 SQLDTRHVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPTRF 318
S L R VL +W+Q+GR F L VAQQ FG+QA AAQ+ERDFS G L NR+R+D YWVEM++FLK N++ IP DIP + K IR CLP +F
Sbjct: 380 SDLQPRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKF 477
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 109 bits (273), Expect = 6.560e-26 Identity = 53/99 (53.54%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 22 LSQLDTRHVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERDFSACGNLLVGNRSRIDTYWVEMLMFLKVNYKHIPALKDIPKIADKDIRRCLPTRF 318
++ VL +W +TG+ F L VAQQ FGNQA+AA VERDFS CG +V NRSR+D YWVEM+MFLK N+ + +IP+I KDIR+CLP +F
Sbjct: 382 MTSCSRSEVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRI-NIPQIDPKDIRKCLPAKF 479 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig871.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig871.8.1 >prot_P-littoralis_Contig871.8.1 ID=prot_P-littoralis_Contig871.8.1|Name=mRNA_P-littoralis_Contig871.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=106bp MSASVCVLSQLDTRHVLPWWQQTGRKMFAYLAPVAQQVFGNQAAAAQVERback to top mRNA from alignment at P-littoralis_Contig871:22719..23036- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig871.8.1 ID=mRNA_P-littoralis_Contig871.8.1|Name=mRNA_P-littoralis_Contig871.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=318bp|location=Sequence derived from alignment at P-littoralis_Contig871:22719..23036- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig871:22719..23036- >mRNA_P-littoralis_Contig871.8.1 ID=mRNA_P-littoralis_Contig871.8.1|Name=mRNA_P-littoralis_Contig871.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=318bp|location=Sequence derived from alignment at P-littoralis_Contig871:22719..23036- (Pylaiella littoralis U1_48)back to top |