prot_P-littoralis_Contig87.196.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig87.196.1
Unique Nameprot_P-littoralis_Contig87.196.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length228
Homology
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BLAST of mRNA_P-littoralis_Contig87.196.1 vs. uniprot
Match: D7G920_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G920_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.480e-33
Identity = 69/89 (77.53%), Postives = 77/89 (86.52%), Query Frame = 0 
Query:    1 MATPAPAKGGEVASKARRPLPITAGEKIVEGERLRDEAHSLIE-DRPKKAAVKFRTVFAFTKGLIPHTSELAVYAAATGQQTVIDQQQQ 88
            M+TP PA GG  AS ARRPLP T G+KIVEGERLRDEA SL++ D+PK AAVKFRTVFA+TKGLIP TSELA+YAA TGQQTVIDQ+QQ
Sbjct:   47 MSTPVPATGGAAASNARRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKTAAVKFRTVFAYTKGLIPQTSELALYAAVTGQQTVIDQKQQ 135
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig87.196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G920_ECTSI1.480e-3377.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig87contigP-littoralis_Contig87:414614..419038 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig87.196.1mRNA_P-littoralis_Contig87.196.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig87 414282..419279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig87.196.1 ID=prot_P-littoralis_Contig87.196.1|Name=mRNA_P-littoralis_Contig87.196.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=228bp
MATPAPAKGGEVASKARRPLPITAGEKIVEGERLRDEAHSLIEDRPKKAA
VKFRTVFAFTKGLIPHTSELAVYAAATGQQTVIDQQQQGFAGGARVSEGT
LPSRSAQPPTQEHRSGQAVLDSRSEARAPQCQHYEGAPESNEIGPGRGRR
GWHRPCHHRLERSRSGRGQKIDDTRQAAWILASSETRGRVRLVSFIGQRN
SFSYRFLARFPKATGFSKLKERLLIVA*
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