prot_P-littoralis_Contig863.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig863.3.1
Unique Nameprot_P-littoralis_Contig863.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length155
Homology
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.260e-57
Identity = 106/156 (67.95%), Postives = 118/156 (75.64%), Query Frame = 0
Query:    1 MVRRGGKQRFIIMAPTGNAACAIGRM-VRCLPAIPVT-NRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT 154
            MV+  G+QRFI+MAPTGNAACAIG M +     IPV  + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QDMLGLMSARGKQAV GR  DG  D   DVFGGLSIIL GD A LPPVGA   W   PS+ GLS+QG QAWL+MNNAVELT
Sbjct:    1 MVKLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELT 156          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 1.500e-53
Identity = 108/156 (69.23%), Postives = 119/156 (76.28%), Query Frame = 0
Query:    1 MVRRGGKQRFIIMAPTGNAACAIGRM-VRCLPAIPVT-NRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT 154
            MVR  G+QRFI+MAPTGNAACAIG M +     IPV  + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QDMLGLMSARGKQAV GR  DG  D   DVFGGLSIIL GD AQLPPVGA   W   PS+ GLS+QG QAWL+MNNAVELT
Sbjct:  810 MVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELT 965          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 1.750e-53
Identity = 108/156 (69.23%), Postives = 119/156 (76.28%), Query Frame = 0
Query:    1 MVRRGGKQRFIIMAPTGNAACAIGRM-VRCLPAIPVT-NRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT 154
            MVR  G+QRFI+MAPTGNAACAIG M +     IPV  + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QDMLGLMSARGKQAV GR  DG  D   DVFGGLSIIL GD AQLPPVGA   W   PS+ GLS+QG QAWL+MNNAVELT
Sbjct:  381 MVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELT 536          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 2.020e-53
Identity = 108/156 (69.23%), Postives = 119/156 (76.28%), Query Frame = 0
Query:    1 MVRRGGKQRFIIMAPTGNAACAIGRM-VRCLPAIPVT-NRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT 154
            MVR  G+QRFI+MAPTGNAACAIG M +     IPV  + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QDMLGLMSARGKQAV GR  DG  D   DVFGGLSIIL GD AQLPPVGA   W   PS+ GLS+QG QAWL+MNNAVELT
Sbjct: 1122 MVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELT 1277          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 3.660e-53
Identity = 106/156 (67.95%), Postives = 119/156 (76.28%), Query Frame = 0
Query:    1 MVRRGGKQRFIIMAPTGNAACAIGRM-VRCLPAIPVT-NRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT 154
            MVR  G+QRFI+MAPTGNAACAIG M +     IPV  + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QD+LGL+SARGKQAV GR  DG  D   DVFGGLSIIL GD AQLPPVGA   W   PS+ GLS+QG QAWL+MNNAVELT
Sbjct:  499 MVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLISARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELT 654          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 6.460e-43
Identity = 84/120 (70.00%), Postives = 94/120 (78.33%), Query Frame = 0
Query:   35 VTNRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT 154
            V + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QD+LGLMSARGKQAV GR  DG  D   DVFGGLSIIL GD AQLPPVGA+  W   PS+ GLS+QG QAWL+MNNAVELT
Sbjct:   13 VQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELT 132          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.190e-35
Identity = 80/155 (51.61%), Postives = 98/155 (63.23%), Query Frame = 0
Query:    1 MVRRGGKQRFIIMAPTGNAACAIG-RMVRCLPAIPVTNRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT 154
            MVR+ G+QRF+++APTGNAACAIG   +     + V NR   D  ++SE A  DLQQ++  VD +LVDEF M+ QDMLG+MS R KQAV GR      D +L +FGGL II+ GD  QL  V     W   P S  LS QG  AWL MN AV+LT
Sbjct: 1192 MVRQLGRQRFLLLAPTGNAACAIGGETIHTGLRVGVQNRPRGDLGEISESARRDLQQKIQGVDFVLVDEFSMIGQDMLGMMSVRLKQAVEGRRTYWVDDRHLGLFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLT 1346          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: UPI00077B041D (ATP-dependent DNA helicase RRM3-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B041D)

HSP 1 Score: 72.8 bits (177), Expect = 2.450e-12
Identity = 52/144 (36.11%), Postives = 80/144 (55.56%), Query Frame = 0
Query:   12 IMAPTGNAACAI-GRMVRCLPAIPVTNRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT 154
            + A TG A+  I G  +  L  +PV  R + +   ++  A++ LQ  +  +  I++DE+ M+ Q MLG +  R +QA       G  D   +VFGGLSIIL GD  QLPPV  K  ++  P+S  +  QG+ A+L  NN ++L+
Sbjct:   44 VTATTGKASYNINGCTIHSLLKLPVRLRGNKE---LTGQALLRLQNNLKGISCIIIDEYSMLGQTMLGWIDRRCRQAT------GISD---EVFGGLSIILFGDPGQLPPVADKPLYHSKPTS-SVGEQGHLAYLMFNNVIKLS 174          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6S7JIW3_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JIW3_PARCT)

HSP 1 Score: 73.2 bits (178), Expect = 3.830e-12
Identity = 57/154 (37.01%), Postives = 81/154 (52.60%), Query Frame = 0
Query:    2 VRRGGKQRFIIMAPTGNAACAI-GRMVRCLPAIPVTNRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLD-VFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVEL 153
            VR   K++ I+ A TG A+  I G  +     +PV      D S  S   + +LQ+ +  VD I++DE+ M+ Q  +G +  R +QA           G  D +FGG SIIL GD AQLPPVG K  ++  PS+P ++ QG  A+   NN V L
Sbjct:  701 VRNYLKEKCIVTATTGKASFNINGITIHSFLKLPVGKMSQKDLSGQS---LDNLQKNLLSVDYIVIDEYSMLGQTTMGWIDKRCRQAT----------GLKDKLFGGKSIILIGDPAQLPPVGDKPLYHSKPSNP-IAEQGSLAYKMFNNVVIL 840          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A7D9E1T4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9E1T4_PARCT)

HSP 1 Score: 72.0 bits (175), Expect = 7.160e-12
Identity = 56/154 (36.36%), Postives = 81/154 (52.60%), Query Frame = 0
Query:    2 VRRGGKQRFIIMAPTGNAACAI-GRMVRCLPAIPVTNRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLD-VFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVEL 153
            VR   K++ I+ A TG A+  I G  +     +PV      D S  S   + +LQ+ +  VD I++DE+ ++ Q  +G +  R +QA           G  D +FGG SIIL GD AQLPPVG K  ++  PS+P ++ QG  A+   NN V L
Sbjct:   69 VRNYLKEKCIVTATTGKASFNINGITIHSFLKLPVGKMSQKDLSGQS---LDNLQKNLLSVDYIVIDEYSLLGQTTMGWIDKRCRQAT----------GLKDKLFGGKSIILIGDPAQLPPVGDKPLYHSKPSNP-IAEQGSLAYKMFNNVVIL 208          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDM0_9PHAE1.260e-5767.95ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
A0A6H5KIQ7_9PHAE1.500e-5369.23ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K558_9PHAE1.750e-5369.23ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KFJ0_9PHAE2.020e-5369.23ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KA18_9PHAE3.660e-5367.95ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KDL6_9PHAE6.460e-4370.00ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE1.190e-3551.61ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI00077B041D2.450e-1236.11ATP-dependent DNA helicase RRM3-like n=1 Tax=Acrop... [more]
A0A6S7JIW3_PARCT3.830e-1237.01ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
A0A7D9E1T4_PARCT7.160e-1236.36ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..133
e-value: 1.6E-11
score: 45.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..126
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 6..126
e-value: 1.0E-8
score: 34.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig863contigP-littoralis_Contig863:14830..15440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig863.3.1mRNA_P-littoralis_Contig863.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig863 14041..15500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig863.3.1 ID=prot_P-littoralis_Contig863.3.1|Name=mRNA_P-littoralis_Contig863.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=155bp
MVRRGGKQRFIIMAPTGNAACAIGRMVRCLPAIPVTNRRSSDPSQMSEGA
IMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGY
LDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNA
VELT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR010285DNA_helicase_pif1-like