mRNA_P-littoralis_Contig863.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig863.3.1
Unique NamemRNA_P-littoralis_Contig863.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 604 bits (1558), Expect = 2.040e-205
Identity = 315/451 (69.84%), Postives = 355/451 (78.71%), Query Frame = 1
Query:    1 PLHLLLTGTVGTGKTVVIREMVRRGGKQRFIIMAPTGNAACAIGRM-VRCLPAIPVT-NRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT*VRRQLGPEQAAFRDTLVRIAEGTQTRSDWILPPQRFTAQVGSVERESIQNAVHIFPTNDKADDWNWQRLNLLRTPIARIDANHTIHGYGAVTTDRFRGLQPHLFLAVGARVFINNDVWVSAGLANGAIGEVVYMQRAEGSAPPSLPEVVRMRVEINQGPQYFEGPLTRQWGGGEVDLTDVIPI---DAMDDEPPARR--------ARCHGTQLPLAPAFGITIHKSHGNTLLRCYLGIGPREKSDGQSFTAFSRCRSLENMLLEPFTLERFLRI 1314
            PL LLLTGT GTGKTVVIREMVR  G+QRFI+MAPTGNAACAIG M +     IPV  + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QDMLGLMSARGKQAV GR  DG  D   DVFGGLSIIL GD AQLPPVGA   W   PS+ GLS+QG QAWL+MNNAVELT V RQ GPEQAAFRDTL+RIAEG QT  DW +  +RF A VG+ ERE+  +AVHIFPTN  ADDWNW+RLN L TPIARI+A HTIHGY AV+++RFRGLQ H+FLA+GARVF+NN+VWVSAGLANGA+GEVV+MQ AEG  PP LPEVV +RVE  +GPQYFE PL R W  GE+DLT++ PI   D MDD+PP  R        ARC   QLPL  AFGITI+KS GNTLLRC+L IG  E+SDGQSFTAFSRCR+LENMLLEPF+LERFL+I
Sbjct:  361 PLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKI 811          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KDL6_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDL6_9PHAE)

HSP 1 Score: 535 bits (1378), Expect = 3.920e-185
Identity = 273/395 (69.11%), Postives = 311/395 (78.73%), Query Frame = 1
Query:  163 VTNRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT*VRRQLGPEQAAFRDTLVRIAEGTQTRSDWILPPQRFTAQVGSVERESIQNAVHIFPTNDKADDWNWQRLNLLRTPIARIDANHTIHGYGAVTTDRFRGLQPHLFLAVGARVFINNDVWVSAGLANGAIGEVVYMQRAEGSAPPSLPEVVRMRVEINQGPQYFEGPLTRQWGGGEVDLTDVIPI---DAMDDEPPARR--------ARCHGTQLPLAPAFGITIHKSHGNTLLRCYLGIGPREKSDGQSFTAFSRCRSLENMLLEPFTLERFLRI 1314
            V + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QD+LGLMSARGKQAV GR  DG  D   DVFGGLSIIL GD AQLPPVGA+  W   PS+ GLS+QG QAWL+MNNAVELT V RQ GPEQAAFRDTL+RIAEG QT  DW +  +RF A VG+ ERE+  +AVHIFPTN  ADDWNW+RLN L TPIARI+A HTIHGY AV+++RFRGLQ H+FLA+GARVF++N VWVSAGLANGA+GEVV+MQ AEG  PP LPEVV +RVE  +GPQYFE PL R W  GE+DLT++ PI   D MDD+PP  R        ARC   QLPL  AFGITI+KSHGNTLLRC L IG  E+SDGQSFTAFSRCR+LENMLLEPF+LERFL+I
Sbjct:   13 VQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGARPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVHNIVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSHGNTLLRCSLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKI 407          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 482 bits (1241), Expect = 1.340e-152
Identity = 259/442 (58.60%), Postives = 305/442 (69.00%), Query Frame = 1
Query:   40 KTVVIREMVRRGGKQRFIIMAPTGNAACAIG-RMVRCLPAIPVTNRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT*VRRQLGPEQAAFRDTLVRIAEGTQTRSDWILPPQRFTAQVGSVERESIQNAVHIFPTNDKADDWNWQRLNLLRTPIARIDANHTIHGYGAVTTDRFRGLQPHLFLAVGARVFINNDVWVSAGLANGAIGEVVYMQRAEGSAPPSLPEVVRMRVEINQGPQYFEGPLTRQWGGGEVDLTDVIPI---DAMDDEPPAR------------RARCHGTQLPLAPAFGITIHKSHGNTLLRCYLGIGPREKSDGQSFTAFSRCRSLENMLLEP-FTLERFLRI 1314
            + + +REMVR+ G+QRF+++APTGNAACAIG   +     + V NR   D  ++SE A  DLQQ++  VD +LVDEF M+ QDMLG+MS R KQAV GR      D +L +FGGL II+ GD  QL  V     W   P S  LS QG  AWL MN AV+LT V RQ G  QAAFR+TL+RIAEG  T +DW     RFT  V + ERES  NAVHIFPTN  ADDWNW+RL  L TPIARIDA+H++HGY  + +DRFRGL+  LFLAVGARVFINN+VW S GLANGA GEVV+MQ A G+ PPSLPEVV +RVE  +G QYF  PL R WGG  VDL +V+PI   DA DD PPA             + RC  TQLPL  AFGITIHKS G TLLRC+L IG +EKSDGQ+FTA SRCR+L+NMLL+P F LER  RI
Sbjct: 1185 QALAVREMVRQLGRQRFLLLAPTGNAACAIGGETIHTGLRVGVQNRPRGDLGEISESARRDLQQKIQGVDFVLVDEFSMIGQDMLGMMSVRLKQAVEGRRTYWVDDRHLGLFGGLCIIMVGDIIQLLTVAQSPMWTSRPQSSALSGQGLYAWLGMNAAVQLTQVMRQQGAAQAAFRETLLRIAEGEATEADWNTLRPRFTTAVDAAERESFDNAVHIFPTNGAADDWNWRRLQALGTPIARIDADHSMHGYAHIPSDRFRGLEGQLFLAVGARVFINNNVWTSGGLANGAAGEVVHMQWAPGTQPPSLPEVVWVRVENYRGEQYFSEPLERPWGGRVVDLRNVVPISPIDAPDDHPPAALRRRGGGANTNAQGRCIRTQLPLMLAFGITIHKSQGATLLRCFLDIGEQEKSDGQTFTALSRCRALDNMLLQPLFCLERLQRI 1626          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 462 bits (1189), Expect = 1.930e-146
Identity = 241/338 (71.30%), Postives = 271/338 (80.18%), Query Frame = 1
Query:    1 PLHLLLTGTVGTGKTVVIREMVRRGGKQRFIIMAPTGNAACAIGRM-VRCLPAIPVT-NRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT*VRRQLGPEQAAFRDTLVRIAEGTQTRSDWILPPQRFTAQVGSVERESIQNAVHIFPTNDKADDWNWQRLNLLRTPIARIDANHTIHGYGAVTTDRFRGLQPHLFLAVGARVFINNDVWVSAGLANGAIGEVVYMQRAEGSAPPSLPEVVRMRVEINQGPQY 1008
            PL LLLTGT GTGKTVVIREMVR  G+QRFI+MAPTGNAACAIG M +     IPV  + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QDMLGLMSARGKQAV GR  DG  D   DVFGGLSIIL GD AQLPPVGA   W   PS+ GLS+QG QAWL+MNNAVELT V RQ GPEQAAFRDTL+RIAEG QT  DW +  +RF A VG+ ERE+  +AVHIFPTN  ADDWNW+RLN L TPIARI+A HTIHGY AV+++RFRGLQ H+FLA+GARVF+NN+VWVSAGLANGA+GEVV+MQ AEG  PP LPEVV +RVE  +GPQY
Sbjct: 1102 PLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNVWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQY 1439          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KGT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGT1_9PHAE)

HSP 1 Score: 347 bits (889), Expect = 6.020e-112
Identity = 169/251 (67.33%), Postives = 197/251 (78.49%), Query Frame = 1
Query:  595 QTRSDWILPPQRFTAQVGSVERESIQNAVHIFPTNDKADDWNWQRLNLLRTPIARIDANHTIHGYGAVTTDRFRGLQPHLFLAVGARVFINNDVWVSAGLANGAIGEVVYMQRAEGSAPPSLPEVVRMRVEINQGPQYFEGPLTRQWGGGEVDLTDVIPI---DAMDDEPPARR--------ARCHGTQLPLAPAFGITIHKSHGNTLLRCYLGIGPREKSDGQSFTAFSRCRSLENMLLEPFTLERFLRI 1314
            QT  DW +  +RF A VG+ ERE+  +AVHIFPTN  ADDWNW+RLN L TPIARI+A HTIHGY AV+++RFRGLQ H+FLA+GARVF+NN+ WVSAGLANGA+GEVV+MQ AEG  PP LPEVV +RVE  +GPQYFE PL R W  GE+DLT++ PI   D MDD+PP  R        ARC   QLPL  AFGITI+KS GNTLLRC+L IG  E+SDGQSFTAFSRCR+LENMLLEPF+LERFL+I
Sbjct:    2 QTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWRRLNSLGTPIARINATHTIHGYNAVSSERFRGLQSHIFLAIGARVFVNNNNWVSAGLANGAVGEVVHMQWAEGQTPPQLPEVVWVRVENYRGPQYFEQPLRRDWADGEIDLTNLCPIAPMDVMDDQPPTGRRRGDGTSIARCFRMQLPLMLAFGITIYKSQGNTLLRCFLDIGASERSDGQSFTAFSRCRTLENMLLEPFSLERFLKI 252          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KDM0_9PHAE (ATP-dependent DNA helicase (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDM0_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 2.240e-89
Identity = 151/224 (67.41%), Postives = 170/224 (75.89%), Query Frame = 1
Query:   61 MVRRGGKQRFIIMAPTGNAACAIGRM-VRCLPAIPVT-NRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT*VRRQLGPEQAAFRDTLVRIAEGTQTRSDWILPPQRFTAQVGSVERESIQNAVHIFPTNDKADDWNWQ 726
            MV+  G+QRFI+MAPTGNAACAIG M +     IPV  + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QDMLGLMSARGKQAV GR  DG  D   DVFGGLSIIL GD A LPPVGA   W   PS+ GLS+QG QAWL+MNNAVELT V RQ GPEQAAFRDTL+RIAEG QT  DW +  +RF A VG+ ERE+  +AVHIFPTN  ADDWNW+
Sbjct:    1 MVKLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAHLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDAVHIFPTNALADDWNWR 224          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 2.520e-84
Identity = 156/228 (68.42%), Postives = 175/228 (76.75%), Query Frame = 1
Query:    1 PLHLLLTGTVGTGKTVVIREMVRRGGKQRFIIMAPTGNAACAIGRM-VRCLPAIPVT-NRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT*VRRQLGPEQAAFRDTLVRIAEGTQTRSDWILPPQRFTAQVGSVERESIQNA 678
            PL LLLTGT GTGKTVVIREMVR  G+QRFI+MAPTGNAACAIG M +     IPV  + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QD+LGL+SARGKQAV GR  DG  D   DVFGGLSIIL GD AQLPPVGA   W   PS+ GLS+QG QAWL+MNNAVELT V RQ GPEQAAFRDTL+RIAEG QT  DW +  +RF A VG+ ERE+  +A
Sbjct:  479 PLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDILGLISARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTRVMRQQGPEQAAFRDTLLRIAEGMQTADDWDVLKRRFIAAVGAAERETFDDA 706          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 3.300e-64
Identity = 131/184 (71.20%), Postives = 142/184 (77.17%), Query Frame = 1
Query:    1 PLHLLLTGTVGTGKTVVIREMVRRGGKQRFIIMAPTGNAACAIGRM-VRCLPAIPVT-NRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT*VRRQLGP 546
            PL LLLTGT GTGKTVVIREMVR  G+QRFI+MAPTGNAACAIG M +     IPV  + RSSDPS+M+E A+ DLQ+RM  VD ILVDEF MV QDMLGLMSARGKQAV GR  DG  D   DVFGGLSIIL GD AQLPPVGA   W   PS+ GLS+QG QAWL+MNNAVELT V RQ GP
Sbjct:  790 PLRLLLTGTAGTGKTVVIREMVRLVGQQRFILMAPTGNAACAIGGMTIHGGFRIPVVQSNRSSDPSRMTEAALRDLQERMAEVDFILVDEFSMVGQDMLGLMSARGKQAVEGRRGDGIEDFRQDVFGGLSIILVGDPAQLPPVGASPLWKHNPSTGGLSMQGLQAWLSMNNAVELTQVMRQQGP 973          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: UPI00077A905F (ATP-dependent DNA helicase PIF1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A905F)

HSP 1 Score: 217 bits (553), Expect = 1.860e-61
Identity = 146/438 (33.33%), Postives = 232/438 (52.97%), Query Frame = 1
Query:    1 PLHLLLTGTVGTGKTVVIREMVRRGGKQRFIIMAPTGNAACAI-GRMVRCLPAIPVTNRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT*VRRQLG--PEQAAFRDTLVRIAEGTQTRSDW-ILPPQRFTAQVGSVERESIQNAVHIFPTNDKADDWNWQRLNLLRTPIARIDANHTIHGYGAVTTDRFRGLQPHLFLAVGARVFINNDVWVSAGLANGAIGEVVYMQRAEGSAPPSLPEVVRMRVEINQGPQYFEGPLTRQWGGGEVDLTDVIPIDAMDDEPPARRARCHGTQLPLAPAFGITIHKSHGNTLLRCYLGIGPREKSDGQSFTAFSRCRSLENMLLEPFTLER 1302
            PL L++ G  GTGK+ +I   +R   +    + A TG AA  I G  +  L  +PV  R + +   ++  A++ LQ  +  +  I+++E+ M+ Q MLG +  R +QA       G  D   +VFG LS+IL GD AQLPPV  +  ++  P+S  +  QG+ A+L   N ++L+  +R  G  PEQ+ FR+ L R+  G  T  DW +L  ++ T     VE    Q+A  ++ +N++  ++N ++L+ L+ PIA ++A+H+       + D   GL+P +FLA GA V +  ++W + GL NGA G V+    A    PP LPE V ++ +  +GP   E             ++  +PI  +              QLPL  A+ ITIHKS G TL + ++ IG  E++ G S+ A SR R+L + ++EP T ER
Sbjct:   91 PLFLIVNGVAGTGKSYLINA-IRNLLRTSCAVTATTGKAAYNINGCTIHSLLKLPVGTRGNKE---LTARALVRLQNNLKRIAYIIIEEYSMLGQTMLGWIDRRCRQAT------GISD---EVFGHLSLILFGDPAQLPPVADRPLYHSKPTS-SIGEQGHLAYLMFTNVIKLSVNQRVQGSNPEQSQFRELLTRLHTGDCTEQDWKLLLTRQPTNAPNLVE---FQDATRLYFSNEEVANYNVEKLSALQHPIACVNAHHSSDLAKKASPDEMAGLEPCIFLAKGAHVMLTLNLWTAVGLCNGATGTVIDFIYANNQQPPDLPEAVIVKFDNYRGPSITES------------ISSCVPICPITVSSQTLDGLHERQQLPLKLAWAITIHKSQGLTLPKAWIDIGQTERTAGISYVAISRVRTLSSCIIEPMTFER 499          
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Match: UPI0009E5528F (LOW QUALITY PROTEIN: uncharacterized protein LOC110054639 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5528F)

HSP 1 Score: 219 bits (559), Expect = 3.610e-59
Identity = 147/438 (33.56%), Postives = 227/438 (51.83%), Query Frame = 1
Query:    1 PLHLLLTGTVGTGKTVVIREMVRRGGKQRFIIMAPTGNAACAI-GRMVRCLPAIPVTNRRSSDPSQMSEGAIMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGYLD-VFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNAVELT*VRRQLG--PEQAAFRDTLVRIAEGTQTRSDWILPPQRFTAQVGSVERESIQNAVHIFPTNDKADDWNWQRLNLLRTPIARIDANHTIHGYGAVTTDRFRGLQPHLFLAVGARVFINNDVWVSAGLANGAIGEVVYMQRAEGSAPPSLPEVVRMRVEINQGPQYFEGPLTRQWGGGEVDLTDVIPIDAMDDEPPARRARCHGTQLPLAPAFGITIHKSHGNTLLRCYLGIGPREKSDGQSFTAFSRCRSLENMLLEPFTLER 1302
            PL L++ G  GTGK+ +I   ++   KQ   + A TG AA +I G  +  +  +PV  + + D   ++  +++ LQ  +  +  I++DE+ M+ Q M   +  R +QA           G  D +FGG SIIL GD AQLPPV  K  ++  PS+  L  QG+  +L  N  V+LT  +R  G  PEQ+ FRD L R+  G  T++DW+L   R  + V ++   + +  V ++ +ND+   +N+++L+ L  PIARI+A H+       + D   GL+P +FLA GA + +  ++W   GL NGA G VV    A    PP LP  V +  +   GP  +                 + PI  + D   +   R    QLPL  ++ +TIHKS G TL   ++ IG  EK+ G S+ A SR ++L + ++EP T ER
Sbjct: 1156 PLLLIIIGGGGTGKSYLINA-IKLLLKQSCAVTATTGKAAFSIRGCTIHSMLKLPVGAKGNKD---LTGESLVRLQNALKEISYIIIDEYSMLGQKMFAWVDKRRRQAT----------GLTDELFGGKSIILVGDPAQLPPVADKPLYHSNPSN-ALQEQGHLVYLMFNTVVKLTLNQRVKGSSPEQSRFRDLLNRLRTGDCTQNDWMLLLNRQPSTVDNIS--AFKGVVRLYYSNDEVAKYNFEKLSDLNQPIARINARHSTEAAKKASADEMSGLEPVVFLAKGAHITLTMNLWTDVGLCNGATGTVVDFIYATNQQPPDLPITVIVMFDDYTGPSIYNNI---------QQCVPICPITVISDTLGSVNER---QQLPLKLSWAMTIHKSQGLTLSNAWIDIGNNEKTPGISYVAISRVKTLSSCIIEPMTFER 1564          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig863.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K558_9PHAE2.040e-20569.84ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KDL6_9PHAE3.920e-18569.11ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE1.340e-15258.60ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KFJ0_9PHAE1.930e-14671.30ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KGT1_9PHAE6.020e-11267.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDM0_9PHAE2.240e-8967.41ATP-dependent DNA helicase (Fragment) n=1 Tax=Ecto... [more]
A0A6H5KA18_9PHAE2.520e-8468.42ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KIQ7_9PHAE3.300e-6471.20ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
UPI00077A905F1.860e-6133.33ATP-dependent DNA helicase PIF1-like n=1 Tax=Acrop... [more]
UPI0009E5528F3.610e-5933.56LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig863contigP-littoralis_Contig863:14041..15500 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5346.XP_002911548.1
PFAMsPIF1
Model size1314
Max annot lvl4751|Fungi
KEGG koko:K15255
Hectar predicted targeting categorymitochondrion
Exons2
Evalue1.39e-07
EggNOG OGsCOG0507@1|root,KOG0987@2759|Eukaryota,3AEDE@33154|Opisthokonta,3PBTZ@4751|Fungi
EC3.6.4.12
DescriptionBelongs to the helicase family
Cds size465
COG categoryL
BRITEko00000,ko01000,ko03029,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791738.084784-UTR-P-littoralis_Contig863:14040..148291680791738.084784-UTR-P-littoralis_Contig863:14040..14829Pylaiella littoralis U1_48UTRP-littoralis_Contig863 14041..14829 -
1680791738.1278276-UTR-P-littoralis_Contig863:15440..155001680791738.1278276-UTR-P-littoralis_Contig863:15440..15500Pylaiella littoralis U1_48UTRP-littoralis_Contig863 15441..15500 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791738.1031528-CDS-P-littoralis_Contig863:14829..151991680791738.1031528-CDS-P-littoralis_Contig863:14829..15199Pylaiella littoralis U1_48CDSP-littoralis_Contig863 14830..15199 -
1680791738.1153975-CDS-P-littoralis_Contig863:15345..154401680791738.1153975-CDS-P-littoralis_Contig863:15345..15440Pylaiella littoralis U1_48CDSP-littoralis_Contig863 15346..15440 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig863.3.1prot_P-littoralis_Contig863.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig863 14830..15440 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig863.3.1

>prot_P-littoralis_Contig863.3.1 ID=prot_P-littoralis_Contig863.3.1|Name=mRNA_P-littoralis_Contig863.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=155bp
MVRRGGKQRFIIMAPTGNAACAIGRMVRCLPAIPVTNRRSSDPSQMSEGA
IMDLQQRMTVVDSILVDEFFMVDQDMLGLMSARGKQAVRGRIRDGDHDGY
LDVFGGLSIILDGDCAQLPPVGAKSTWNPAPSSPGLSVQGYQAWLAMNNA
VELT*
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mRNA from alignment at P-littoralis_Contig863:14041..15500-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig863.3.1 ID=mRNA_P-littoralis_Contig863.3.1|Name=mRNA_P-littoralis_Contig863.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1460bp|location=Sequence derived from alignment at P-littoralis_Contig863:14041..15500- (Pylaiella littoralis U1_48)
CCACTACATTTGCTGCTTACGGGGACCGTAGGGACCGGGAAGACTGTCGT CATCCGGGAGATGGTCAGGAGGGGCGGAAAGCAGCGATTCATTATCATGG CCCCGACGGGCAACGCTGCTTGCGCTATTGGAAGAATGGTGAGGTGTCTG CCTGCGTTCTTCGCATGTTGTAGGCGTTGACCAATATGTGTCTAAAAGAA CAACACCACAGCTCACGAGCCCAATACCCTCAACCCATACCCGTTCAACT CGGTCATACTCTCGAATCCCCCTTGCCGCAGACCATCCACAGCGGTTGAA GGATTCCCGTCACCAACCGACGTTCGTCAGACCCCAGCCAAATGAGTGAG GGCGCCATCATGGACCTTCAGCAGCGCATGACTGTCGTCGACTCCATCCT CGTCGACGAGTTCTTCATGGTGGACCAAGACATGCTGGGCCTCATGAGCG CCAGAGGCAAGCAGGCCGTTAGAGGCCGAATCCGAGATGGGGACCATGAT GGATACCTCGACGTCTTCGGAGGCCTCAGCATCATCCTCGACGGTGACTG CGCCCAGCTTCCCCCGGTCGGAGCGAAATCCACGTGGAACCCCGCGCCGT CCTCCCCCGGCCTTAGCGTGCAAGGGTATCAGGCATGGTTGGCCATGAAC AACGCAGTTGAGCTCACGTAGGTCAGGCGCCAGCTTGGCCCTGAGCAGGC CGCCTTCCGCGACACACTCGTGCGAATAGCGGAAGGCACTCAAACCCGGA GCGACTGGATTCTTCCGCCGCAGAGATTCACAGCACAGGTCGGAAGTGTC GAACGCGAGTCAATCCAAAACGCTGTCCACATCTTCCCGACGAACGACAA GGCCGACGATTGGAACTGGCAGCGGTTAAACCTCCTCCGCACGCCCATCG CAAGGATCGATGCCAACCACACTATCCACGGCTATGGCGCAGTCACTACC GACAGGTTCAGAGGCTTGCAGCCCCACCTTTTCCTCGCGGTCGGGGCGCG CGTTTTCATCAACAACGACGTCTGGGTCTCAGCGGGTCTGGCGAACGGTG CCATCGGGGAGGTCGTATACATGCAACGGGCGGAGGGCAGCGCACCGCCA TCGCTGCCGGAAGTCGTGCGGATGCGAGTTGAGATTAACCAGGGGCCTCA GTATTTCGAGGGCCCACTCACCAGACAGTGGGGCGGTGGTGAGGTAGACC TGACCGACGTCATCCCCATCGACGCCATGGACGATGAACCACCTGCGCGC AGGGCTCGCTGTCATGGGACGCAATTGCCGTTGGCGCCAGCTTTCGGCAT CACCATCCACAAGAGTCACGGCAACACCCTCTTGCGCTGCTACTTGGGCA TCGGACCAAGGGAAAAGAGCGACGGCCAGTCCTTCACTGCCTTCAGCCGA TGCCGAAGCCTCGAAAACATGCTGCTCGAGCCCTTCACCCTTGAGCGATT TCTCAGGATA
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Coding sequence (CDS) from alignment at P-littoralis_Contig863:14041..15500-

>mRNA_P-littoralis_Contig863.3.1 ID=mRNA_P-littoralis_Contig863.3.1|Name=mRNA_P-littoralis_Contig863.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=465bp|location=Sequence derived from alignment at P-littoralis_Contig863:14041..15500- (Pylaiella littoralis U1_48)
ATGGTCAGGAGGGGCGGAAAGCAGCGATTCATTATCATGGCCCCGACGGG
CAACGCTGCTTGCGCTATTGGAAGAATGGTGAGGTGTCTGCCTGCGATTC
CCGTCACCAACCGACGTTCGTCAGACCCCAGCCAAATGAGTGAGGGCGCC
ATCATGGACCTTCAGCAGCGCATGACTGTCGTCGACTCCATCCTCGTCGA
CGAGTTCTTCATGGTGGACCAAGACATGCTGGGCCTCATGAGCGCCAGAG
GCAAGCAGGCCGTTAGAGGCCGAATCCGAGATGGGGACCATGATGGATAC
CTCGACGTCTTCGGAGGCCTCAGCATCATCCTCGACGGTGACTGCGCCCA
GCTTCCCCCGGTCGGAGCGAAATCCACGTGGAACCCCGCGCCGTCCTCCC
CCGGCCTTAGCGTGCAAGGGTATCAGGCATGGTTGGCCATGAACAACGCA
GTTGAGCTCACGTAG
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