mRNA_P-littoralis_Contig120.65.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Match: A0A6H5JDZ7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDZ7_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 1.610e-21 Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 7 NGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYFWRRVFDQKLQQAISNA 183
NG+ ++S QP+AR YV MGGVDVADQRL AHAH H+PMT+FWRRVFDQKL A+SNA
Sbjct: 281 NGEKVSSSQPLARKKYVKNMGGVDVADQRLGAHAHTHRPMTFFWRRVFDQKLSHAVSNA 339
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 2.580e-21 Identity = 40/58 (68.97%), Postives = 50/58 (86.21%), Query Frame = 1
Query: 7 NGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYFWRRVFDQKLQQAISN 180
NG+ ++S+QP+AR +YV MGGVDVADQRL +HAH H+PMT+FWRRVFDQK QA+SN
Sbjct: 253 NGEKVSSRQPLARKEYVKNMGGVDVADQRLGSHAHKHRPMTFFWRRVFDQKFAQAVSN 310
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Match: A0A6H5JC56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC56_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 1.110e-20 Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 7 NGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYFWRRVFDQKLQQAISNA 183
NG+ ++S QP+AR ++V MGGVDVADQ L AHAH H+PMT+FWRRVFDQK QA+SNA
Sbjct: 297 NGEKVSSSQPLARKEHVKNMGGVDVADQWLGAHAHTHRPMTFFWRRVFDQKFSQAVSNA 355
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Match: A0A6H5JHH7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHH7_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 6.670e-20 Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 1
Query: 7 NGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYFWRRVFDQKLQQAISNA 183
NG+ ++S QP+AR +YV MGGVDVADQRL AHA H+PMT+FWRRVF QK QA+SNA
Sbjct: 303 NGEKVSSSQPLARKEYVKNMGGVDVADQRLGAHARTHRPMTFFWRRVFAQKFSQAVSNA 361
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Match: A0A6H5KGW0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW0_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 1.080e-19 Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 1
Query: 7 NGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYFWRRVFDQKLQQAISNA 183
NG + S QP+AR +YV +GGVDVADQRL+AHAH H+PMT+FW RV DQK QA+SNA
Sbjct: 174 NGDKVPSHQPLARKEYVKNIGGVDVADQRLSAHAHTHRPMTFFWGRVLDQKFAQAVSNA 232
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Match: A0A6H5K972_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K972_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.320e-18 Identity = 40/59 (67.80%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 7 NGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYFWRRVFDQKLQQAISNA 183
+G ++S QP+AR DYV MGGVDVADQRL H H HK T+FWRRVFDQK QAISNA
Sbjct: 302 DGNSVSSLQPLARLDYVVRMGGVDVADQRLMTHQHGHKQKTFFWRRVFDQKFAQAISNA 360
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Match: A0A6H5JTJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ5_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 5.330e-16 Identity = 33/52 (63.46%), Postives = 43/52 (82.69%), Query Frame = 1
Query: 7 NGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYFWRRVFDQKL 162
NG+ ++S QP+AR +YV +GG++VADQRL AHAH H+PMT+FWR VFDQK
Sbjct: 395 NGEKVSSSQPLARKEYVKNIGGLEVADQRLGAHAHTHRPMTFFWRSVFDQKF 446
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Match: A0A6H5LEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEE0_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 1.090e-15 Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 1
Query: 1 GQNGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYFWRRVFDQKLQQAISNA 183
G+NG+ L +QP R DYV M GVD+ADQ+ +H HDHK T FWRRV+D KL+QA++NA
Sbjct: 597 GRNGEPLDLQQPYMRMDYVLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNA 657
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Match: A0A6H5JER6_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER6_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 6.820e-15 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 1
Query: 1 GQNGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYFWRRVFDQKLQQAISNA 183
G+NG+ L +QP R DY M GVD+ADQ+ +H HDHK T FWRRV+D KL+QA++NA
Sbjct: 273 GRNGEPLDLQQPWTRMDYFLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNA 333
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Match: A0A6H5KG44_9PHAE (DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG44_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 3.090e-12 Identity = 29/43 (67.44%), Postives = 38/43 (88.37%), Query Frame = 1
Query: 7 NGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYF 135
NG+ ++S+QP+AR +YV MGGVDVADQRL+AHAH H+PMT+F
Sbjct: 215 NGEKVSSQQPLARKEYVKNMGGVDVADQRLSAHAHTHRPMTFF 257 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig120.65.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig120.65.1 >prot_P-littoralis_Contig120.65.1 ID=prot_P-littoralis_Contig120.65.1|Name=mRNA_P-littoralis_Contig120.65.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=61bp GQNGQVLTSKQPVARFDYVGGMGGVDVADQRLNAHAHDHKPMTYFWRRVFback to top mRNA from alignment at P-littoralis_Contig120:387326..387510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig120.65.1 ID=mRNA_P-littoralis_Contig120.65.1|Name=mRNA_P-littoralis_Contig120.65.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=185bp|location=Sequence derived from alignment at P-littoralis_Contig120:387326..387510+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig120:387326..387510+ >mRNA_P-littoralis_Contig120.65.1 ID=mRNA_P-littoralis_Contig120.65.1|Name=mRNA_P-littoralis_Contig120.65.1|organism=Pylaiella littoralis U1_48|type=CDS|length=183bp|location=Sequence derived from alignment at P-littoralis_Contig120:387326..387510+ (Pylaiella littoralis U1_48)back to top |