mRNA_P-littoralis_Contig86.63.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI) HSP 1 Score: 1057 bits (2733), Expect = 0.000e+0 Identity = 605/688 (87.94%), Postives = 616/688 (89.53%), Query Frame = 3
Query: 420 MALSVPPAMTQAPTQGQQGQQGQG--------SPAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGE--EAKEKGEGKSR---GFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTTLYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAGGAQGMYSMPYWMGAQPGMPQQPRQYMMPQMMPRGPRGPMPAYGGRGNYXXXXXXXXXXXXXX-GQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXX----GAPQQS-MPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQQEVN 2426
MAL+ PPAMTQAP QG + AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDD+GESKGYGYVHYE GVSANMAI KINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLP SWDDAKLREEFEKHGAVTSCKVQVAPQEG+ E+KEK GFGFVNFEEH+SAVKAIEA N E+PDGEGTTTLYCARAQKKSER RELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFA YGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMA GAQGMY MPYWMGAQPGMPQQPRQ+MMPQMMPRGPRGPMPAYGGRGNY GQPQPRR AG XXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQ XXXXXXX GAP MP PGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQP LAGKITGMLLEMDNGELLHLLESP++L+AKINEALQVLSEHQQE N
Sbjct: 1 MALNAPPAMTQAPAQGXXXXXXXXXXXXXXXXNAAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKXXXXXXXXXGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYGMPYWMGAQPGMPQQPRQFMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQQQQMPGQPQPRRGAGPRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQXXXXXXXXXXXXGAPXXXXMPAPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSEHQQENN 688
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA) HSP 1 Score: 693 bits (1788), Expect = 7.330e-234 Identity = 408/651 (62.67%), Postives = 463/651 (71.12%), Query Frame = 3
Query: 495 PAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNG-TELPDGEGTTTLYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAGGAQGMYSM--PYWMGAQPG-MPQQPRQY---MMPQMM-PRG-PRG---PMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEH 2411
P + P+HSASLYVGDL+ D+ E+TLFEIF+QVGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMNFT IKD CRIMWSQRDPS+RRSGVGN+FVKNLDET+DNKALYDTFSLFGNILSCKVATDD+G SKGYGYVHYET SAN AI KI+GM++ GKQVHVGHFVRR++RAGQADWTN+YVK +P +WD+ KLR EF K G + S K+Q + SRGFGF+NFE+H++A A+ NG T T L+C RAQK++ERQRELQ+K++ +K+ERMNK+QGVN+YVKNLDE V E A+REAFA GTITS R+M D N SKGFGFVCFS+PEEATKA+ EMN +M+ +KPIYVALAQR+EVRR QLEAQ+AQ+ GG+ PRG PM GMY M PY M QPG MPQ PR MMPQMM PRG PRG M Y GRG Y P P G XXXXXX +GNFKYTQ VRN P A PQ XXXX ESL+A ALAAA PE QKNMIGERLYPLI+E QP+LAGKITGMLLEMDNGELLHLLESP++L AKI EALQVL H
Sbjct: 55 PQVTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASL-------SRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGN-SKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTY----------------PMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQ----QGNFKYTQQVRN--PPAQGQAPQMGGMXXXXXXXXXXXXX-------XQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 667
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A6A3LR95_9STRA (Polyadenylate-binding protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR95_9STRA) HSP 1 Score: 625 bits (1611), Expect = 2.440e-207 Identity = 411/653 (62.94%), Postives = 465/653 (71.21%), Query Frame = 3
Query: 498 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDS-GESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPP-RGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG-PRGPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----RGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATN---ESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 2414
A P+H+ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D + G SKGYGYVHYET +A AI KINGMLIAG +V VGHF +R +R DWTN YVK +P W DA L +EFE G V S V E+ +RGFGFVN+E+ +SA KA++A NG P GEG T +Y +AQK+SER+REL++K +Q+KMER+NK+QGVN+YVKNLD+ +T+D +REAFA+ GTITS+RVM D + N S+GFGFVCFS PEEA KA+ EMNGK++ KP+YVALAQR+EVRR QLEAQ AQ+ GM RGMPM G MY QPG MP Q RQ +M PQ MMPRG RGP+P YG R P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G R NFKYT RN A + PPQ G P AAP N E L++AALAAA PE QKNMIGERLYPLI+ QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EAL VL HQ
Sbjct: 71 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTNGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTMWTDADLLKEFEPFGNVLSAVVMKDNANPEQ--------NRGFGFVNYEDSESAHKAVDALNGKSYPAGEGLETEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLTDDELREAFAECGTITSSRVMRDPNGN--SRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQRAGMVVGRGMPM--GQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP-YGAR--------------------VPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHP--ARDAPPQ----------------GVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALTVLEAHQ 672
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: M4B4S0_HYAAE (Polyadenylate-binding protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4B4S0_HYAAE) HSP 1 Score: 620 bits (1599), Expect = 3.730e-206 Identity = 406/653 (62.17%), Postives = 465/653 (71.21%), Query Frame = 3
Query: 498 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDS-GESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPP-RGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG-PRGPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----RGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATN---ESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 2414
A P+H+ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D + G SKGYGYVHYET +A AI KINGMLIAG +V VGHF +R +R DWTN YVK +P W DA L +EFE G V S V ++ +RGFGFVN+++ DSA +A++A NG P G+G T +Y +AQK++ER+REL++K +Q+KMER+NK+QGVN+YVKNLD+ +++D +REAF + GTITS+RVM D + N S+GFGFVCFS PEEA KA+ EMNGK+++ KP+YVALAQR+EVRR QLEAQ AQ+ GM RGMPM G MY QPG MP Q RQ +M PQ MMPRG RGP+P YG R P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G R NFKYT RN A MPPQ G P AAP N E L++AALAAA PE QKNMIGERLYPLI+ QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EAL VL HQ
Sbjct: 30 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKSVPCRIMWSQRDPSLRKSGVGNIFVKNLDLSIDNKALYDTFSLFGNILSCKVAIDHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTKWTDADLLKEFEPFGHVLSAVVMKDNANPDQ--------NRGFGFVNYDDSDSAHRAVDALNGKAYPVGDGVETDIYVGKAQKRTERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFVECGTITSSRVMRDPNGN--SRGFGFVCFSTPEEANKAVAEMNGKLIVGKPVYVALAQRKEVRRAQLEAQHAQQRAGMAMGRGMPM--GQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP-YGAR--------------------VPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHP--AREMPPQ----------------GVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALAVLEAHQ 631
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA) HSP 1 Score: 617 bits (1592), Expect = 1.610e-204 Identity = 377/649 (58.09%), Postives = 444/649 (68.41%), Query Frame = 3
Query: 498 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGGMPPRGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG--PRGPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQQE 2420
+ P+H+ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D +G SKGYGYVHYET +A AI KINGMLIAG +V VGHF +R +R +WTN YVK +P++WDD LR+EFE GA++SC V K+ ++RGFGFVNFEE ++A +A E N + +G LY +AQK+SER+REL+ K + +KMER+NK+QGVN+YVKNLD+ +T++ +REAFA GTITS R+M D + N S+GFGFVCF+ PEEATKA+TEM+GK++ KPIYVALAQR+EVRR QLEAQ AQ+ TG + RGMPM MY AQP MP Q RQ ++ PQ MMPRG PRGP+P G P+ XXXXXXXXXXXXXX R NFKYT RNQ P +P Q G PQ E L++AALAAA P QKNMIGERL+PLI+ QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL HQ E
Sbjct: 67 SATPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAAYEAIAKINGMLIAGTEVFVGHFQKRQDRPDSENWTNCYVKNIPQTWDDVTLRKEFEPFGAISSCVVM---------KDASSEQNRGFGFVNFEEPEAAREACEKLNNKVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRDPAGN--SRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRGMPMQ--QPPMYGAAPMFYAQPNQMPPQARQGFVYPQQMMPRGGLPRGPIP-----------YRQPGVPGGPAGYGMPQXXXXXXXXXXXXXXXXXXGPPQMAGPPGQANPNANRNRNNFKYTANARNQPPVQEPVPQQ------PGGIPQM--------------EPLTSAALAAASPGMQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHQSE 671
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN) HSP 1 Score: 615 bits (1586), Expect = 2.740e-204 Identity = 374/669 (55.90%), Postives = 438/669 (65.47%), Query Frame = 3
Query: 492 SPAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRGPR-------------------GPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATN-----ESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 2414
S A P+H+ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D +G SKGYGYVHYET +AN AI KINGMLIAG +V+VGHF +R R +WTN YVK +P+ W + ++R+EFE G V S V K+ G +GFGFVNFE+ + A KA+EA NG + +G+ LY RAQK+SER+REL++K +Q+KMER++K+QGVN+YVKNLD+ +T++ +REAF +GTITS+R+M D + S+GFGFVCFS PEEA KA+ EMNGK++ KP+YVALAQR+EVRR QLEAQ AQR G M RG+PM G MY AQP +P Q RQ ++ PQ MMP G MPAYG GQP+ RR R NFKYT VRNQ P + P GAP PG P AAP E L++AALAAA PE QKNMIGERLYPLI+ QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EA+QVL HQ
Sbjct: 19 SGAAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAANEAIAKINGMLIAGTEVYVGHFQKRQERPDVDEWTNCYVKNIPQXWTEEEMRKEFEPFGTVVSLVVM---------KDAGAEHHKGFGFVNFEKSEGAHKAVEALNGKVYKNPDGSDVELYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRDTAG--VSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQRAGLMG-RGIPM--GQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMMPXXXXXXXXXXXXXXXXXXXXXXPGYMPAYG-------------MPMQPRGQPRGRRQG---------------------PGPAGPQAGAPVNRRNFKYTANVRNQ-PRPEGVAP---------GAPA---PGVMPPAAPVQPGVPHLEPLTSAALAAASPETQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQ 626
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA) HSP 1 Score: 614 bits (1584), Expect = 8.220e-204 Identity = 388/661 (58.70%), Postives = 453/661 (68.53%), Query Frame = 3
Query: 507 PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKV--ATDD--SGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTEL--PDGEGTTTLYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAG----GAQGMYSMPYWMGAQPGMPQQPRQY-MMPQMMPRGPRGPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATNESLSA-----------AALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQQEV 2423
P+HSASLYVGDL+ DV+EA LFEIF+ VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMN+T IK CRIMWSQRDPSLRRSGVGNIFVKNLD +VDNKALYDTFSLFGNILSCKV A DD S E +GYGYVHYET +AN AI KINGMLIAGK+V+VGHFV+R +RA +DWTNLY+K +PE W + KL +EF K G VTS K + + E + G+GFVN+ +H+SAVKA+EA NG +L PDGE +Y RAQKK+ER+REL++K + +K ER+NK+QGVN+YVKNLD+ +T++ +RE F YGTITSARVM D++ N S+GFGFVC+SAPEEATKA++E NGK++ KP+Y+ALAQRREVRR QLEAQ+A+ GG+PPRG+P+ GA MY+MP G P Q R Y MMP MM XXXXXXXXXXXXXX P G XXXXXXXX GR G GAP + QQ P Q PG P AALAAA PE+QKNMIGERLYPLI + QP+LAGKITGMLLEMDNGELLHLLESPEAL+ KI EAL VL +H ++
Sbjct: 11 PFHSASLYVGDLAPDVSEALLFEIFNAVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNYTLIKGVPCRIMWSQRDPSLRRSGVGNIFVKNLDPSVDNKALYDTFSLFGNILSCKVVVAKDDQVSDEEQGYGYVHYETAEAANEAIAKINGMLIAGKEVYVGHFVKRQDRASASDWTNLYIKNIPEDWSEEKLNDEFGKFGEVTSVKAVIKKMDPVEEGAPPPKVAGGYGFVNYADHESAVKAVEAMNGLKLKHPDGE-EREMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRDSNGN--SRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIPLGQPGMYGAMPMYAMPPGQGIPP---QASRGYPMMPAMM---------------XXXXXXXXXXXXXXXXXXXXPAYAMGPLQQXXXXXXXXS-------------------GRXXXXXXGG------GAPRVGGQQ---------PGQQQVRPGAMPVPXXXXXXXXXXXXXXXXXXXAALAAATPEQQKNMIGERLYPLIQQSQPELAGKITGMLLEMDNGELLHLLESPEALATKIAEALAVLEQHNAQM 616
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: W4FQT6_9STRA (Polyadenylate-binding protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FQT6_9STRA) HSP 1 Score: 608 bits (1568), Expect = 2.220e-201 Identity = 382/662 (57.70%), Postives = 453/662 (68.43%), Query Frame = 3
Query: 492 SPAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELP--DGEGTTTLYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRT----GGMPPRGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG--PRGPMP-----AYGGRGNYXXXXXXXXXXXXXXGQPQ---PRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQQE 2420
S A P+H+ASLYVGD+ +V EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK CRIMWSQRDP+LR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D +G SKGYGYVHYET +A +AI KINGMLIAG +V VGHF +R+NR +DWTN Y+K +P +WDDAKLR EFE G ++SC V K+ +RGFGFVNFEE ++A +A + NG + D LY +AQK+SER+REL+ K + +KMER+NK+QGVN+YVKNLD+ +T++ +REAF GTITSAR+M D + S+GFGFVCF+ PEEATKA+T+++GK+L KPIYVALAQR+EVRR QLEAQ AQ+ G+P + P GA M+ AQP +P Q RQ ++ PQ M+PRG PRGP+P GG G Y G PQ XXXXXXXXX XXXXXXXXXXX R NFKYT RNQ P PQ G P T E L++AALAAA P QKNMIGERL+PLI+ QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL H+ E
Sbjct: 26 SAAAQPFHTASLYVGDIHPEVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKSVPCRIMWSQRDPTLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAYDLNGNSKGYGYVHYETAEAAYLAIEKINGMLIAGTEVFVGHFQKRENRPADSDWTNCYIKNIPHNWDDAKLRSEFEPFGVISSCVVM---------KDTTSENNRGFGFVNFEEPEAAREATDKLNGKVVATDDNGADIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFTAVGTITSARIMRDPAG--ASRGFGFVCFATPEEATKAVTDLSGKLLNGKPIYVALAQRKEVRRAQLEAQHAQQRMVAGRGLPLQHQPPMYGAAPMFY------AQPNQLPPQARQGFVYPQQMIPRGGIPRGPIPYRQPGVPGGPGGY--------------GMPQYXXXXXXXXXXXXXXXXXGPPGQLAGPPXXXXXXXXXXXQNNRNNFKYTANARNQ-PSLQEQAPQPAAPAVAAGVP--------------TLEPLTSAALAAASPSIQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHETE 641
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: F0W707_9STRA (Polyadenylate-binding protein n=2 Tax=Albugo TaxID=65356 RepID=F0W707_9STRA) HSP 1 Score: 605 bits (1560), Expect = 1.050e-199 Identity = 367/651 (56.37%), Postives = 422/651 (64.82%), Query Frame = 3
Query: 501 IAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR-TGGMPPRGMPMAGGAQGMYSMPYWMGAQPGMPQQPRQ-YMMPQ-MMPRG--PRGPMPAYGGRGNYXXXXXXXXXXXXXXGQP-----QPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGA--PQQSMPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 2414
+ P+ +ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHN+ DAERALDTMNFT IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D +G+SKGYGYVHYET +A AI KINGMLIAG +V VGHF +R R DWTN YVK LP W DA LR EFE G V S V P +RGFGFVN+E+ D A A+E +G G LY +AQK++ER+REL+ K DQ+K+ER+NK+QGVN+YVKNLD+ + ++ +REAF YGTITSARVM D++ N S+GFGFVCFS PEEA A+ EMNGK++ KP+YVA AQR+EVRR QLEAQ AQR TG + RGMPM G MY P + MP Q RQ YM PQ M+PRG PR P +GGR G P QPRR R NFKYT G RN P ++ G PQ S G APA E L++AALAAA PE QKNMIGERLYPLI+ Q +LAGKITGMLLEMDN ELLHLLESP+AL +KI EA+QVL HQ
Sbjct: 70 VQPFQTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNLVDAERALDTMNFTCIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDPSIDNKALYDTFSLFGNILSCKVANDPTGQSKGYGYVHYETAEAATEAINKINGMLIAGTEVFVGHFQKRQERPDIEDWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVMKDPNSAT---------NRGFGFVNYEDADGAHAAVEGLSGKTFKGVNGVDLELYVGKAQKRTERERELRQKFDQLKLERINKYQGVNLYVKNLDDLLQDEELREAFTNYGTITSARVMRDSTGN--SRGFGFVCFSTPEEAATAVAEMNGKLITGKPVYVAFAQRKEVRRAQLEAQHAQRATGVLVNRGMPM--GQPPMYGAPMFYAQPNQMPMQGRQAYMYPQQMLPRGVHPRVPF-GFGGR--MPGAPGPAGFSMAGYGMPMQQQRQPRR--------------------GRQVPGPAGAPNGMPNRRNFKYTTGARNH-------PSREGLGNNMSGGVMPQGSSTPMG--GAPAL-EPLTSAALAAASPEAQKNMIGERLYPLIHRQQNELAGKITGMLLEMDNSELLHLLESPDALDSKIQEAIQVLEAHQ 674
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD) HSP 1 Score: 602 bits (1552), Expect = 3.580e-199 Identity = 401/651 (61.60%), Postives = 464/651 (71.27%), Query Frame = 3
Query: 489 GSPAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDS-GESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFA-QRTGGMPPRGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQMMPRGPRGPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPG-PQAAPAT---NESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 2414
G+ A P+H+ASLYVGD+ DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D++ G SKGYGYVHYET +A+ AI KINGMLIAG +V VGHF +R +R DWTN YVK +P W D L +EF+ G V S + ++ +RGFGFVNFEE + A KA+EA NG +G+ LY +AQK+SER+REL++K +Q+KMER+NK+QGVN+YVKNLD+ + +D +REAFA GTITS+RVM D + N S+GFGFVCFS PEEA KA+ EMNGK++ KP+YVALAQR+EVRR QLEAQ A QR G + RG+PM G MY QP MP Q RQ ++ PQ M +P RG +XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXX R NFKYT VRNQ P ++ P PG P AAP E L++AALAAA P+ QKNMIGERLYPLI+ QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EA+QVL HQ
Sbjct: 22 GAAAAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDNTTGASKGYGYVHYETAEAAHEAIAKINGMLIAGTEVFVGHFQKRQDRPDIDDWTNCYVKNIPSQWSDEDLLKEFKPFGPVLSAVIM---------RDADAELNRGFGFVNFEESEGAHKAVEALNGKVYQTADGSDLELYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLNDDELREAFASAGTITSSRVMRDQNGN--SRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAHQRAGLVVGRGLPM--GQPPMYGAAPMFYTQPNQMPPQARQGFVYPQQM-------LP----RGVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGPGAVNRRNFKYTANVRNQPP-------------------REGAPAPGAPPAAPVQVGGPEPLTSAALAAASPDVQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQ 629 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig86.63.4 >prot_P-littoralis_Contig86.63.4 ID=prot_P-littoralis_Contig86.63.4|Name=mRNA_P-littoralis_Contig86.63.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=670bp MALSVPPAMTQAPTQGQQGQQGQGSPAIAPYHSASLYVGDLSKDVAEATLback to top mRNA from alignment at P-littoralis_Contig86:187237..197021- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig86.63.4 ID=mRNA_P-littoralis_Contig86.63.4|Name=mRNA_P-littoralis_Contig86.63.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=9785bp|location=Sequence derived from alignment at P-littoralis_Contig86:187237..197021- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig86:187237..197021- >mRNA_P-littoralis_Contig86.63.4 ID=mRNA_P-littoralis_Contig86.63.4|Name=mRNA_P-littoralis_Contig86.63.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2010bp|location=Sequence derived from alignment at P-littoralis_Contig86:187237..197021- (Pylaiella littoralis U1_48)back to top |