prot_P-littoralis_Contig86.63.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig86.63.4
Unique Nameprot_P-littoralis_Contig86.63.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length670
Homology
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 1055 bits (2729), Expect = 0.000e+0
Identity = 605/688 (87.94%), Postives = 616/688 (89.53%), Query Frame = 0
Query:    1 MALSVPPAMTQAPTQGQQGQQGQG--------SPAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGE--EAKEKGEGKSR---GFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTTLYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAGGAQGMYSMPYWMGAQPGMPQQPRQYMMPQMMPRGPRGPMPAYGGRGNYXXXXXXXXXXXXXX-GQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXX----GAPQQS-MPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQQEVN 669
            MAL+ PPAMTQAP QG                + AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDD+GESKGYGYVHYE GVSANMAI KINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLP SWDDAKLREEFEKHGAVTSCKVQVAPQEG+  E+KEK         GFGFVNFEEH+SAVKAIEA N  E+PDGEGTTTLYCARAQKKSER RELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFA YGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMA GAQGMY MPYWMGAQPGMPQQPRQ+MMPQMMPRGPRGPMPAYGGRGNY               GQPQPRR AG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQ XXXXXXX    GAP    MP PGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQP LAGKITGMLLEMDNGELLHLLESP++L+AKINEALQVLSEHQQE N
Sbjct:    1 MALNAPPAMTQAPAQGXXXXXXXXXXXXXXXXNAAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKXXXXXXXXXGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYGMPYWMGAQPGMPQQPRQFMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQQQQMPGQPQPRRGAGPRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQXXXXXXXXXXXXGAPXXXXMPAPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSEHQQENN 688          
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 692 bits (1785), Expect = 4.350e-241
Identity = 408/651 (62.67%), Postives = 463/651 (71.12%), Query Frame = 0
Query:   26 PAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNG-TELPDGEGTTTLYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAGGAQGMYSM--PYWMGAQPG-MPQQPRQY---MMPQMM-PRG-PRG---PMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEH 664
            P + P+HSASLYVGDL+ D+ E+TLFEIF+QVGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMNFT IKD  CRIMWSQRDPS+RRSGVGN+FVKNLDET+DNKALYDTFSLFGNILSCKVATDD+G SKGYGYVHYET  SAN AI KI+GM++ GKQVHVGHFVRR++RAGQADWTN+YVK +P +WD+ KLR EF K G + S K+Q    +           SRGFGF+NFE+H++A  A+   NG T       T  L+C RAQK++ERQRELQ+K++ +K+ERMNK+QGVN+YVKNLDE V E A+REAFA  GTITS R+M D    N SKGFGFVCFS+PEEATKA+ EMN +M+ +KPIYVALAQR+EVRR QLEAQ+AQ+ GG+ PRG PM     GMY M  PY M  QPG MPQ PR     MMPQMM PRG PRG    M  Y GRG Y                P P    G      XXXXXX                     +GNFKYTQ VRN  P A    PQ    XXXX                   ESL+A ALAAA PE QKNMIGERLYPLI+E QP+LAGKITGMLLEMDNGELLHLLESP++L AKI EALQVL  H
Sbjct:   55 PQVTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPASL-------SRGFGFINFEDHEAAESAVSEMNGKTVSGPAVETRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGN-SKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTY----------------PMPAYAMGAMPVQQXXXXXXGASGGAPQQAQAGGVPQ----QGNFKYTQQVRN--PPAQGQAPQMGGMXXXXXXXXXXXXX-------XQAESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 667          
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A6A3LR95_9STRA (Polyadenylate-binding protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR95_9STRA)

HSP 1 Score: 623 bits (1607), Expect = 4.140e-214
Identity = 411/653 (62.94%), Postives = 465/653 (71.21%), Query Frame = 0
Query:   27 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDS-GESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPP-RGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG-PRGPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----RGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATN---ESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 665
            A  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D + G SKGYGYVHYET  +A  AI KINGMLIAG +V VGHF +R +R    DWTN YVK +P  W DA L +EFE  G V S  V       E+        +RGFGFVN+E+ +SA KA++A NG   P GEG  T +Y  +AQK+SER+REL++K +Q+KMER+NK+QGVN+YVKNLD+ +T+D +REAFA+ GTITS+RVM D + N  S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQ+  GM   RGMPM  G   MY        QPG MP Q RQ +M PQ MMPRG  RGP+P YG R                     P     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G    R NFKYT   RN    A + PPQ                G  P AAP  N   E L++AALAAA PE QKNMIGERLYPLI+  QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EAL VL  HQ
Sbjct:   71 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTNGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTMWTDADLLKEFEPFGNVLSAVVMKDNANPEQ--------NRGFGFVNYEDSESAHKAVDALNGKSYPAGEGLETEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLTDDELREAFAECGTITSSRVMRDPNGN--SRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQRAGMVVGRGMPM--GQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP-YGAR--------------------VPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHP--ARDAPPQ----------------GVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALTVLEAHQ 672          
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: M4B4S0_HYAAE (Polyadenylate-binding protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4B4S0_HYAAE)

HSP 1 Score: 619 bits (1595), Expect = 6.700e-213
Identity = 406/653 (62.17%), Postives = 465/653 (71.21%), Query Frame = 0
Query:   27 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDS-GESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPP-RGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG-PRGPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----RGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATN---ESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 665
            A  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D + G SKGYGYVHYET  +A  AI KINGMLIAG +V VGHF +R +R    DWTN YVK +P  W DA L +EFE  G V S  V       ++        +RGFGFVN+++ DSA +A++A NG   P G+G  T +Y  +AQK++ER+REL++K +Q+KMER+NK+QGVN+YVKNLD+ +++D +REAF + GTITS+RVM D + N  S+GFGFVCFS PEEA KA+ EMNGK+++ KP+YVALAQR+EVRR QLEAQ AQ+  GM   RGMPM  G   MY        QPG MP Q RQ +M PQ MMPRG  RGP+P YG R                     P     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G    R NFKYT   RN    A  MPPQ                G  P AAP  N   E L++AALAAA PE QKNMIGERLYPLI+  QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EAL VL  HQ
Sbjct:   30 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKSVPCRIMWSQRDPSLRKSGVGNIFVKNLDLSIDNKALYDTFSLFGNILSCKVAIDHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTKWTDADLLKEFEPFGHVLSAVVMKDNANPDQ--------NRGFGFVNYDDSDSAHRAVDALNGKAYPVGDGVETDIYVGKAQKRTERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFVECGTITSSRVMRDPNGN--SRGFGFVCFSTPEEANKAVAEMNGKLIVGKPVYVALAQRKEVRRAQLEAQHAQQRAGMAMGRGMPM--GQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIP-YGAR--------------------VPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHP--AREMPPQ----------------GVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALAVLEAHQ 631          
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN)

HSP 1 Score: 613 bits (1582), Expect = 5.220e-211
Identity = 374/669 (55.90%), Postives = 438/669 (65.47%), Query Frame = 0
Query:   25 SPAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRGPR-------------------GPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATN-----ESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 665
            S A  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D +G SKGYGYVHYET  +AN AI KINGMLIAG +V+VGHF +R  R    +WTN YVK +P+ W + ++R+EFE  G V S  V          K+ G    +GFGFVNFE+ + A KA+EA NG    + +G+   LY  RAQK+SER+REL++K +Q+KMER++K+QGVN+YVKNLD+ +T++ +REAF  +GTITS+R+M D +    S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQR G M  RG+PM  G   MY       AQP  +P Q RQ ++ PQ MMP                       G MPAYG                   GQP+ RR                                    R NFKYT  VRNQ P    + P         GAP    PG  P AAP        E L++AALAAA PE QKNMIGERLYPLI+  QP+LAGKITGMLLEMDNGELLHLLESPEAL AKI EA+QVL  HQ
Sbjct:   19 SGAAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAANEAIAKINGMLIAGTEVYVGHFQKRQERPDVDEWTNCYVKNIPQXWTEEEMRKEFEPFGTVVSLVVM---------KDAGAEHHKGFGFVNFEKSEGAHKAVEALNGKVYKNPDGSDVELYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRDTAG--VSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQRAGLMG-RGIPM--GQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMMPXXXXXXXXXXXXXXXXXXXXXXPGYMPAYG-------------MPMQPRGQPRGRRQG---------------------PGPAGPQAGAPVNRRNFKYTANVRNQ-PRPEGVAP---------GAPA---PGVMPPAAPVQPGVPHLEPLTSAALAAASPETQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQ 626          
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA)

HSP 1 Score: 615 bits (1586), Expect = 5.970e-211
Identity = 377/649 (58.09%), Postives = 444/649 (68.41%), Query Frame = 0
Query:   27 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGGMPPRGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG--PRGPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQQE 667
            +  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D +G SKGYGYVHYET  +A  AI KINGMLIAG +V VGHF +R +R    +WTN YVK +P++WDD  LR+EFE  GA++SC V          K+    ++RGFGFVNFEE ++A +A E  N   +   +G    LY  +AQK+SER+REL+ K + +KMER+NK+QGVN+YVKNLD+ +T++ +REAFA  GTITS R+M D + N  S+GFGFVCF+ PEEATKA+TEM+GK++  KPIYVALAQR+EVRR QLEAQ AQ+  TG +  RGMPM      MY       AQP  MP Q RQ ++ PQ MMPRG  PRGP+P                      G   P+    XXXXXXXXXXXXXX                   R NFKYT   RNQ P    +P Q        G PQ               E L++AALAAA P  QKNMIGERL+PLI+  QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL  HQ E
Sbjct:   67 SATPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAAYEAIAKINGMLIAGTEVFVGHFQKRQDRPDSENWTNCYVKNIPQTWDDVTLRKEFEPFGAISSCVVM---------KDASSEQNRGFGFVNFEEPEAAREACEKLNNKVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRDPAGN--SRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRGMPMQ--QPPMYGAAPMFYAQPNQMPPQARQGFVYPQQMMPRGGLPRGPIP-----------YRQPGVPGGPAGYGMPQXXXXXXXXXXXXXXXXXXGPPQMAGPPGQANPNANRNRNNFKYTANARNQPPVQEPVPQQ------PGGIPQM--------------EPLTSAALAAASPGMQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHQSE 671          
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA)

HSP 1 Score: 612 bits (1579), Expect = 2.230e-210
Identity = 388/657 (59.06%), Postives = 451/657 (68.65%), Query Frame = 0
Query:   30 PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKV--ATDD--SGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTEL--PDGEGTTTLYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAG----GAQGMYSMPYWMGAQPGMPQQPRQY-MMPQMMPRGPRGPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATNESLSA-----------AALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEH 664
            P+HSASLYVGDL+ DV+EA LFEIF+ VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMN+T IK   CRIMWSQRDPSLRRSGVGNIFVKNLD +VDNKALYDTFSLFGNILSCKV  A DD  S E +GYGYVHYET  +AN AI KINGMLIAGK+V+VGHFV+R +RA  +DWTNLY+K +PE W + KL +EF K G VTS K  +   +  E        + G+GFVN+ +H+SAVKA+EA NG +L  PDGE    +Y  RAQKK+ER+REL++K + +K ER+NK+QGVN+YVKNLD+ +T++ +RE F  YGTITSARVM D++ N  S+GFGFVC+SAPEEATKA++E NGK++  KP+Y+ALAQRREVRR QLEAQ+A+  GG+PPRG+P+      GA  MY+MP   G  P   Q  R Y MMP MM                 XXXXXXXXXXXXXX    P    G    XXXXXXXX                    GR       G      GAP +  QQ         P Q    PG    P                   AALAAA PE+QKNMIGERLYPLI + QP+LAGKITGMLLEMDNGELLHLLESPEAL+ KI EAL VL +H
Sbjct:   11 PFHSASLYVGDLAPDVSEALLFEIFNAVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNYTLIKGVPCRIMWSQRDPSLRRSGVGNIFVKNLDPSVDNKALYDTFSLFGNILSCKVVVAKDDQVSDEEQGYGYVHYETAEAANEAIAKINGMLIAGKEVYVGHFVKRQDRASASDWTNLYIKNIPEDWSEEKLNDEFGKFGEVTSVKAVIKKMDPVEEGAPPPKVAGGYGFVNYADHESAVKAVEAMNGLKLKHPDGE-EREMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRDSNGN--SRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIPLGQPGMYGAMPMYAMPPGQGIPP---QASRGYPMMPAMM---------------XXXXXXXXXXXXXXXXXXXXPAYAMGPLQQXXXXXXXXS-------------------GRXXXXXXGG------GAPRVGGQQ---------PGQQQVRPGAMPVPXXXXXXXXXXXXXXXXXXXAALAAATPEQQKNMIGERLYPLIQQSQPELAGKITGMLLEMDNGELLHLLESPEALATKIAEALAVLEQH 612          
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: W4FQT6_9STRA (Polyadenylate-binding protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FQT6_9STRA)

HSP 1 Score: 606 bits (1562), Expect = 9.190e-208
Identity = 382/662 (57.70%), Postives = 453/662 (68.43%), Query Frame = 0
Query:   25 SPAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELP--DGEGTTTLYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRT----GGMPPRGMPMAGGAQGMYSMPYWMGAQPG-MPQQPRQ-YMMPQ-MMPRG--PRGPMP-----AYGGRGNYXXXXXXXXXXXXXXGQPQ---PRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQQE 667
            S A  P+H+ASLYVGD+  +V EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDP+LR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D +G SKGYGYVHYET  +A +AI KINGMLIAG +V VGHF +R+NR   +DWTN Y+K +P +WDDAKLR EFE  G ++SC V          K+     +RGFGFVNFEE ++A +A +  NG  +   D      LY  +AQK+SER+REL+ K + +KMER+NK+QGVN+YVKNLD+ +T++ +REAF   GTITSAR+M D +    S+GFGFVCF+ PEEATKA+T+++GK+L  KPIYVALAQR+EVRR QLEAQ AQ+      G+P +  P   GA  M+       AQP  +P Q RQ ++ PQ M+PRG  PRGP+P       GG G Y              G PQ         XXXXXXXXX          XXXXXXXXXXX   R NFKYT   RNQ P      PQ        G P              T E L++AALAAA P  QKNMIGERL+PLI+  QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL  H+ E
Sbjct:   26 SAAAQPFHTASLYVGDIHPEVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKSVPCRIMWSQRDPTLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAYDLNGNSKGYGYVHYETAEAAYLAIEKINGMLIAGTEVFVGHFQKRENRPADSDWTNCYIKNIPHNWDDAKLRSEFEPFGVISSCVVM---------KDTTSENNRGFGFVNFEEPEAAREATDKLNGKVVATDDNGADIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFTAVGTITSARIMRDPAG--ASRGFGFVCFATPEEATKAVTDLSGKLLNGKPIYVALAQRKEVRRAQLEAQHAQQRMVAGRGLPLQHQPPMYGAAPMFY------AQPNQLPPQARQGFVYPQQMIPRGGIPRGPIPYRQPGVPGGPGGY--------------GMPQYXXXXXXXXXXXXXXXXXGPPGQLAGPPXXXXXXXXXXXQNNRNNFKYTANARNQ-PSLQEQAPQPAAPAVAAGVP--------------TLEPLTSAALAAASPSIQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHETE 641          
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: F0W707_9STRA (Polyadenylate-binding protein n=2 Tax=Albugo TaxID=65356 RepID=F0W707_9STRA)

HSP 1 Score: 603 bits (1556), Expect = 2.250e-206
Identity = 367/651 (56.37%), Postives = 422/651 (64.82%), Query Frame = 0
Query:   28 IAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTT-LYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR-TGGMPPRGMPMAGGAQGMYSMPYWMGAQPGMPQQPRQ-YMMPQ-MMPRG--PRGPMPAYGGRGNYXXXXXXXXXXXXXXGQP-----QPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGA--PQQSMPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEHQ 665
            + P+ +ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHN+ DAERALDTMNFT IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D +G+SKGYGYVHYET  +A  AI KINGMLIAG +V VGHF +R  R    DWTN YVK LP  W DA LR EFE  G V S  V   P             +RGFGFVN+E+ D A  A+E  +G       G    LY  +AQK++ER+REL+ K DQ+K+ER+NK+QGVN+YVKNLD+ + ++ +REAF  YGTITSARVM D++ N  S+GFGFVCFS PEEA  A+ EMNGK++  KP+YVA AQR+EVRR QLEAQ AQR TG +  RGMPM  G   MY  P +      MP Q RQ YM PQ M+PRG  PR P   +GGR                 G P     QPRR                                    R NFKYT G RN        P ++       G   PQ S    G   APA  E L++AALAAA PE QKNMIGERLYPLI+  Q +LAGKITGMLLEMDN ELLHLLESP+AL +KI EA+QVL  HQ
Sbjct:   70 VQPFQTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNLVDAERALDTMNFTCIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDPSIDNKALYDTFSLFGNILSCKVANDPTGQSKGYGYVHYETAEAATEAINKINGMLIAGTEVFVGHFQKRQERPDIEDWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVMKDPNSAT---------NRGFGFVNYEDADGAHAAVEGLSGKTFKGVNGVDLELYVGKAQKRTERERELRQKFDQLKLERINKYQGVNLYVKNLDDLLQDEELREAFTNYGTITSARVMRDSTGN--SRGFGFVCFSTPEEAATAVAEMNGKLITGKPVYVAFAQRKEVRRAQLEAQHAQRATGVLVNRGMPM--GQPPMYGAPMFYAQPNQMPMQGRQAYMYPQQMLPRGVHPRVPF-GFGGR--MPGAPGPAGFSMAGYGMPMQQQRQPRR--------------------GRQVPGPAGAPNGMPNRRNFKYTTGARNH-------PSREGLGNNMSGGVMPQGSSTPMG--GAPAL-EPLTSAALAAASPEAQKNMIGERLYPLIHRQQNELAGKITGMLLEMDNSELLHLLESPDALDSKIQEAIQVLEAHQ 674          
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Match: A0A067BXY4_SAPPC (Polyadenylate-binding protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXY4_SAPPC)

HSP 1 Score: 600 bits (1548), Expect = 5.880e-206
Identity = 388/646 (60.06%), Postives = 449/646 (69.50%), Query Frame = 0
Query:   30 PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDD-SGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEEAKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTT-TLYCARAQKKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-------GMPPRGMPMAGGAQGMYSMPYWMGAQPGMPQQPRQ-YMMPQ-MMPRGPRGPMPAYGGRGNYXXXXXXXXXXXXXXGQPQPRRTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQQXXXXXXXGAPQQSMPGPGPQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEALSAKINEALQVLSEH 664
            P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D+ SG SKGYGYVHYET  +AN AI KINGMLIAG +V VGHF +R +R   ADWTN YVK +P +WDDA LR+EFE  G++TSC V       ++A  +G   +RGFGFVNF+E +SA KA+EA N   +   +G    LY  +AQK+SER+REL++K + +KMER+NK+QGVN+YVKNLD+ + +D +REAF   GTITS R+M D S N  S+GFGFVCF+ PEEATKA+T+MNGK++  KPIYVALAQR+EVRR QLEAQ AQ+         GMP +  PM G A   Y+ P        MP Q RQ ++ PQ MMPRG                XXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXX             R NFKYT   RNQ   AP  P                        A    E L++AALAAA P  QKNMIGERL+PLI + QP LAGKITGMLLEMDNGELLHLLESPEAL  KI EA+ VL  H
Sbjct:   27 PFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDVSIDNKALYDTFSLFGNILSCKVAIDNTSGGSKGYGYVHYETAEAANEAIAKINGMLIAGSEVFVGHFQKRQDRPDLADWTNCYVKNIPHNWDDATLRKEFEVFGSITSCVVM------KDASSEG---NRGFGFVNFDEPESAQKAVEALNDKVVGQEDGADIALYVGKAQKRSERERELRNKFEALKMERINKYQGVNLYVKNLDDQLNDDELREAFTTCGTITSCRIMKDPSGN--SRGFGFVCFATPEEATKAVTDMNGKLVSGKPIYVALAQRKEVRRAQLEAQHAQQRASGMVVGRGMPMQQPPMYGAAPMFYAQPNQ------MPPQSRQGFVYPQQMMPRG---------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVPPQMQGQPRNNRNNFKYTANARNQPEVAPAAP------------------------AVPVMEPLTSAALAAASPNMQKNMIGERLFPLIEKSQPSLAGKITGMLLEMDNGELLHLLESPEALEGKITEAIAVLEAH 616          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig86.63.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD5_ECTSI0.000e+087.94Polyadenylate-binding protein n=2 Tax=Ectocarpus T... [more]
A0A835YVH9_9STRA4.350e-24162.67Polyadenylate-binding protein n=1 Tax=Tribonema mi... [more]
A0A6A3LR95_9STRA4.140e-21462.94Polyadenylate-binding protein n=5 Tax=Phytophthora... [more]
M4B4S0_HYAAE6.700e-21362.17Polyadenylate-binding protein n=19 Tax=Peronospora... [more]
A0A2D4BDJ5_PYTIN5.220e-21155.90Polyadenylate-binding protein n=2 Tax=Pythium TaxI... [more]
A0A6G0WN78_9STRA5.970e-21158.09Polyadenylate-binding protein n=2 Tax=Aphanomyces ... [more]
A0A7S2V0G2_9STRA2.230e-21059.06Polyadenylate-binding protein n=2 Tax=Fibrocapsa j... [more]
W4FQT6_9STRA9.190e-20857.70Polyadenylate-binding protein n=8 Tax=Aphanomyces ... [more]
F0W707_9STRA2.250e-20656.37Polyadenylate-binding protein n=2 Tax=Albugo TaxID... [more]
A0A067BXY4_SAPPC5.880e-20660.06Polyadenylate-binding protein n=4 Tax=Saprolegniac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 211..295
e-value: 8.5E-19
score: 78.4
coord: 123..195
e-value: 1.0E-19
score: 81.5
coord: 328..402
e-value: 3.6E-26
score: 103.0
coord: 35..108
e-value: 1.8E-21
score: 87.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 124..193
e-value: 1.3E-16
score: 60.1
coord: 329..399
e-value: 4.7E-21
score: 74.4
coord: 212..287
e-value: 1.3E-13
score: 50.5
coord: 36..105
e-value: 5.0E-19
score: 67.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 210..301
score: 15.98847
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 327..406
score: 19.672436
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 122..199
score: 16.176081
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 34..112
score: 16.517189
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinSMARTSM00517poly_2coord: 601..664
e-value: 3.6E-36
score: 136.2
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinPFAMPF00658PABPcoord: 597..661
e-value: 2.2E-29
score: 101.3
IPR002004Polyadenylate-binding protein/Hyperplastic disc proteinPROSITEPS51309PABCcoord: 589..666
score: 21.894764
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 6..122
e-value: 1.5E-25
score: 91.8
coord: 204..307
e-value: 1.6E-22
score: 81.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 308..414
e-value: 1.2E-28
score: 101.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 123..203
e-value: 7.5E-20
score: 72.9
NoneNo IPR availableGENE3D1.10.1900.10coord: 587..669
e-value: 6.8E-33
score: 114.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..609
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 545..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 487..505
NoneNo IPR availablePANTHERPTHR24012:SF466POLYADENYLATE-BINDING PROTEIN 1-LIKEcoord: 29..663
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 29..663
NoneNo IPR availableCDDcd12378RRM1_I_PABPscoord: 35..114
e-value: 2.64741E-50
score: 167.326
NoneNo IPR availableCDDcd12381RRM4_I_PABPscoord: 326..406
e-value: 2.91338E-46
score: 156.24
IPR006515Polyadenylate binding protein, human types 1, 2, 3, 4TIGRFAMTIGR01628TIGR01628coord: 34..661
e-value: 2.0E-217
score: 722.0
IPR045305PABP, RNA recognition motif 2CDDcd12379RRM2_I_PABPscoord: 120..196
e-value: 2.57314E-48
score: 161.95
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 33..202
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 208..410
IPR036053PABC (PABP) domainSUPERFAMILY63570PABC (PABP) domaincoord: 527..667

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig86contigP-littoralis_Contig86:188443..196602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig86.63.4mRNA_P-littoralis_Contig86.63.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig86 187237..197021 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig86.63.4 ID=prot_P-littoralis_Contig86.63.4|Name=mRNA_P-littoralis_Contig86.63.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=670bp
MALSVPPAMTQAPTQGQQGQQGQGSPAIAPYHSASLYVGDLSKDVAEATL
FEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTI
KDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILS
CKVATDDSGESKGYGYVHYETGVSANMAITKINGMLIAGKQVHVGHFVRR
DNRAGQADWTNLYVKGLPESWDDAKLREEFEKHGAVTSCKVQVAPQEGEE
AKEKGEGKSRGFGFVNFEEHDSAVKAIEAFNGTELPDGEGTTTLYCARAQ
KKSERQRELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAQY
GTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIY
VALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAGGAQGMYSMPYWMGAQP
GMPQQPRQYMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQQQMPGQPQ
PRRTAGPRQQRGGPQPQGGRGGPQGRGMPQQPQGQGGPGRGNFKYTQGVR
NQQPGAPNMPPQQQQQQQQQGAPQQSMPGPGPQAAPATNESLSAAALAAA
PPEKQKNMIGERLYPLIYEGQPQLAGKITGMLLEMDNGELLHLLESPEAL
SAKINEALQVLSEHQQEVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR002004PABP_HYD
IPR012677Nucleotide-bd_a/b_plait_sf
IPR006515PABP_1234
IPR045305RRM2_I_PABPs
IPR035979RBD_domain_sf
IPR036053PABP-dom